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FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00146
Bact-VirFFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00146
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-125
Domain cluster:
rep: NC_029048.2__YP_009221738.1__PHICD211_20135__00153__D2-127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05618.18 best | RimB-like | 49.8 | 4.80e-13 | 99.2% | 76.8% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.87 | 80.0 | 8.09e-01 | 100.0% | 96.7% |
| 3sqfA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.78 | 59.0 | 6.61e-01 | 97.5% | 100.0% |
| 2fivA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.75 | 64.0 | 6.70e-01 | 100.0% | 96.5% |
| 3liyA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.73 | 63.0 | 6.53e-01 | 100.0% | 97.4% |
| 7tbdB01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.69 | 64.0 | 5.73e-01 | 100.0% | 93.3% |
| 5c9dB00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.69 | 61.0 | 6.15e-01 | 100.0% | 95.8% |
| 1mppA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.69 | 63.0 | 5.51e-01 | 100.0% | 90.6% |
| 1b5fC00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.68 | 63.0 | 4.98e-01 | 100.0% | 62.2% |
| 1yg9A02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.68 | 61.0 | 5.95e-01 | 95.1% | 97.7% |
| 1bxoA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.68 | 62.0 | 5.61e-01 | 100.0% | 90.9% |
| 1j71A01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.66 | 61.0 | 5.41e-01 | 100.0% | 89.6% |
| 1wkrA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.66 | 61.0 | 5.44e-01 | 100.0% | 83.5% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 28.0 | 3.77e-01 | 86.1% | 93.1% |
| 4fvdA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 36.0 | 3.99e-01 | 97.5% | 91.5% |
| 3nvqA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 27.0 | 3.15e-01 | 77.9% | 70.2% |
| 3lhoA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.50 | 42.0 | 3.42e-01 | 92.6% | 77.0% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4656484 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.92 | 89.0 | 8.18e-01 | 100.0% | 84.7% |
| 3969410 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.92 | 79.0 | 8.06e-01 | 88.5% | 95.0% |
| 3966871 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.90 | 86.0 | 8.44e-01 | 99.2% | 96.9% |
| 4964766 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.88 | 73.0 | 7.69e-01 | 100.0% | 94.5% |
| 5032197 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.88 | 67.0 | 7.05e-01 | 95.9% | 86.4% |
| 4992338 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.88 | 68.0 | 7.30e-01 | 98.4% | 92.4% |
| 4882945 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.88 | 79.0 | 7.74e-01 | 100.0% | 87.8% |
| 5023444 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.87 | 73.0 | 7.70e-01 | 97.5% | 95.5% |
| 17 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.87 | 80.0 | 7.95e-01 | 100.0% | 92.9% |
| 4933116 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.86 | 68.0 | 7.01e-01 | 98.4% | 86.1% |
| 4933942 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.85 | 67.0 | 6.93e-01 | 98.4% | 86.1% |
| 5009916 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.84 | 63.0 | 6.80e-01 | 97.5% | 90.5% |
| 5030771 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.84 | 66.0 | 6.85e-01 | 98.4% | 87.0% |
| 5031909 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.84 | 67.0 | 6.82e-01 | 98.4% | 85.6% |
| 5030532 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.83 | 64.0 | 6.58e-01 | 95.9% | 84.3% |
| 3938624 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.82 | 64.0 | 6.58e-01 | 98.4% | 85.2% |
| 3931768 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 64.0 | 6.35e-01 | 98.4% | 78.4% |
| 3249073 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.82 | 64.0 | 6.54e-01 | 98.4% | 83.3% |
| 4993389 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 65.0 | 6.62e-01 | 98.4% | 85.0% |
| 3520846 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 62.0 | 6.79e-01 | 98.4% | 98.0% |
| 4928555 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 69.0 | 6.92e-01 | 100.0% | 89.5% |
| 3934416 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.78 | 65.0 | 6.61e-01 | 98.4% | 88.3% |
| 3631178 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.77 | 67.0 | 6.34e-01 | 98.4% | 79.3% |
| 5073196 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.77 | 66.0 | 6.61e-01 | 100.0% | 89.4% |
| 3274948 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.76 | 65.0 | 5.90e-01 | 100.0% | 70.3% |
| 3225435 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.74 | 64.0 | 6.65e-01 | 98.4% | 97.3% |
| 5077747 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.74 | 66.0 | 6.55e-01 | 99.2% | 92.0% |
| 4946870 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.72 | 67.0 | 6.46e-01 | 100.0% | 89.6% |
| 3735297 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.70 | 61.0 | 6.21e-01 | 95.1% | 95.0% |
| 4993449 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.70 | 57.0 | 6.12e-01 | 91.8% | 100.0% |
| 4968395 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.70 | 63.0 | 6.15e-01 | 100.0% | 90.0% |
| 3190199 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.69 | 64.0 | 4.32e-01 | 100.0% | 46.5% |
| 4993154 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.69 | 62.0 | 6.13e-01 | 99.2% | 91.4% |
| 4071051 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.69 | 63.0 | 4.56e-01 | 100.0% | 46.0% |
| 3464657 | 1.1.1.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N | 0.69 | 63.0 | 4.37e-01 | 100.0% | 48.5% |
| 3463776 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.69 | 63.0 | 5.09e-01 | 100.0% | 71.7% |
| 4022528 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.69 | 63.0 | 4.55e-01 | 100.0% | 46.0% |
| 1877706 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.69 | 63.0 | 5.54e-01 | 100.0% | 87.6% |
| 3649494 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.68 | 63.0 | 4.36e-01 | 100.0% | 53.5% |
| 4604535 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.68 | 63.0 | 4.45e-01 | 100.0% | 45.8% |
| 4023465 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.68 | 63.0 | 4.33e-01 | 100.0% | 52.7% |
| 3738046 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.68 | 62.0 | 4.25e-01 | 100.0% | 51.3% |
| 3357616 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.68 | 63.0 | 4.37e-01 | 100.0% | 41.3% |
| 3647503 | 1.1.1.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N | 0.68 | 62.0 | 5.43e-01 | 98.4% | 97.7% |
| 3782710 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.68 | 63.0 | 4.42e-01 | 100.0% | 41.6% |
| 4371579 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.68 | 62.0 | 4.46e-01 | 100.0% | 49.4% |
| 3441494 | 1.1.1.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N | 0.67 | 61.0 | 5.65e-01 | 97.5% | 99.3% |
| 3184963 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.67 | 62.0 | 4.26e-01 | 100.0% | 39.0% |
| 3320001 | 1.1.1.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N | 0.67 | 62.0 | 5.78e-01 | 100.0% | 88.0% |
| 3183750 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.67 | 62.0 | 4.25e-01 | 100.0% | 47.1% |
| 3643483 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.67 | 55.0 | 5.46e-01 | 87.7% | 99.2% |
| 3173120 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.67 | 62.0 | 4.28e-01 | 100.0% | 49.0% |
| 4015847 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.67 | 62.0 | 4.25e-01 | 100.0% | 47.4% |
| 3229229 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.67 | 58.0 | 5.79e-01 | 92.6% | 99.2% |
| 3730618 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.67 | 62.0 | 4.24e-01 | 100.0% | 45.2% |
| 3426823 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.67 | 60.0 | 5.56e-01 | 95.9% | 100.0% |
| 3192140 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.67 | 61.0 | 4.29e-01 | 98.4% | 47.8% |
| 3723559 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.67 | 61.0 | 4.30e-01 | 100.0% | 47.7% |
| 3786587 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.67 | 61.0 | 4.27e-01 | 100.0% | 51.2% |
| 1249208 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.66 | 61.0 | 5.32e-01 | 100.0% | 86.7% |
| 4022276 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.66 | 61.0 | 4.18e-01 | 98.4% | 43.6% |
| 4395060 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.66 | 58.0 | 5.87e-01 | 97.5% | 95.8% |
| 4604024 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.66 | 61.0 | 4.25e-01 | 100.0% | 51.0% |
| 3366061 | 1.1.1.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N | 0.66 | 60.0 | 5.19e-01 | 100.0% | 87.9% |
| 4315666 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.66 | 61.0 | 4.36e-01 | 100.0% | 41.8% |
| 3789234 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.66 | 60.0 | 4.34e-01 | 98.4% | 44.4% |
| 4352043 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.66 | 60.0 | 4.15e-01 | 100.0% | 42.2% |
| 3178520 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.65 | 60.0 | 4.10e-01 | 100.0% | 49.6% |
| 4300780 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.65 | 60.0 | 4.29e-01 | 100.0% | 54.8% |
| 5022327 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.58 | 47.0 | 5.04e-01 | 98.4% | 100.0% |
| 4024501 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 35.0 | 3.71e-01 | 80.3% | 69.5% |
| 4942223 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.56 | 45.0 | 4.79e-01 | 97.5% | 100.0% |
| 4967336 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.56 | 48.0 | 4.97e-01 | 96.7% | 98.3% |
| 4963690 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.55 | 43.0 | 4.63e-01 | 96.7% | 99.0% |
| 4986543 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.55 | 44.0 | 4.69e-01 | 97.5% | 99.0% |