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FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00193

Bact-Vir

FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00193

Identity

Kingdom:
phage

Quality

82.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 251-390
PDB
D2 high residues 716-860
PDB
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.76 58.0 6.46e-01 87.6% 100.0%
3isrA02 2.60.40.2250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 39.0 4.64e-01 89.0% 78.0%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.68 49.0 5.20e-01 100.0% 83.1%
1h6eA02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.67 40.0 4.56e-01 100.0% 80.0%
4en2A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.66 39.0 4.53e-01 100.0% 80.8%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 44.0 5.11e-01 98.6% 96.1%
4wz9A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.66 44.0 3.86e-01 100.0% 45.8%
3h7jA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 39.0 4.41e-01 100.0% 81.8%
3wmqA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 39.0 4.66e-01 86.9% 95.7%
2xq0A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.62 38.0 3.61e-01 100.0% 49.7%
1sefA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 41.0 4.28e-01 100.0% 74.0%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.61 46.0 5.04e-01 93.1% 95.0%
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 40.0 4.72e-01 89.0% 98.0%
4mv2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 39.0 4.28e-01 100.0% 77.5%
3i7dA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 38.0 3.71e-01 100.0% 58.6%
2vqaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 39.0 3.62e-01 100.0% 54.8%
5fq0A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 36.0 4.07e-01 100.0% 80.9%
1gqgC01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 39.0 4.04e-01 100.0% 71.4%
5f1sA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 35.0 4.07e-01 97.2% 83.7%
5cu1A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 35.0 3.12e-01 99.3% 43.7%
3eqeA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 38.0 3.73e-01 100.0% 62.2%
2ww8A02 2.60.40.2110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 48.0 4.30e-01 100.0% 66.2%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 51.0 4.80e-01 99.3% 97.2%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 51.0 3.93e-01 97.9% 79.3%
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.56 39.0 4.48e-01 95.2% 100.0%
1y3tA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 37.0 3.58e-01 100.0% 60.6%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 4.40e-01 93.1% 92.0%
5wxuA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 36.0 3.48e-01 98.6% 59.3%
1x8mA01 2.60.120.520 Mainly Beta › Sandwich › Jelly Rolls › pectin degrading enzyme 5-keto 4- deoxyuronate isomerase, domain 1 0.55 41.0 4.46e-01 98.6% 91.8%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 47.0 4.59e-01 93.8% 96.3%
1fxzA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 36.0 3.44e-01 98.6% 58.5%
5j7mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 35.0 3.74e-01 99.3% 74.6%
7chiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 36.0 3.20e-01 96.6% 45.4%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 3.88e-01 96.6% 70.0%
5jpnB04 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.54 40.0 4.34e-01 95.9% 92.6%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 39.0 3.65e-01 100.0% 61.2%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.54 45.0 4.53e-01 93.8% 90.3%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.53 45.0 3.22e-01 91.7% 95.5%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 3.82e-01 95.9% 67.5%
2atfA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 36.0 3.35e-01 100.0% 54.3%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 3.80e-01 95.9% 69.1%
2b39A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 4.40e-01 95.9% 99.1%
4lejA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 37.0 3.50e-01 100.0% 61.5%
3sybA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.52 39.0 2.92e-01 80.7% 97.5%
3kglB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 37.0 3.16e-01 100.0% 47.1%
2y7lA02 2.60.40.2430 Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain 0.51 40.0 4.01e-01 100.0% 80.1%
3hlkA01 2.60.40.2240 Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain 0.50 38.0 3.97e-01 91.0% 85.2%
1gv9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 3.61e-01 89.0% 98.2%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
441034 3386.1.1.4 beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C 0.76 59.0 6.41e-01 95.9% 97.5%
1165730 10.20.1.1 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N_2 0.71 40.0 4.70e-01 89.7% 78.2%
3701186 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.71 42.0 4.63e-01 100.0% 73.0%
3715744 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.70 43.0 4.85e-01 100.0% 80.0%
2581320 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 55.0 5.91e-01 96.6% 96.0%
3637401 4081.1.1.8 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT_2 0.69 52.0 4.52e-01 100.0% 52.3%
3252861 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.69 51.0 4.47e-01 100.0% 52.1%
3989692 4081.1.1.12 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 0.68 46.0 4.04e-01 100.0% 47.1%
4004318 4182.1.1.3 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C 0.68 42.0 4.59e-01 96.6% 74.2%
3964117 4182.1.1.3 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C 0.67 42.0 5.04e-01 99.3% 95.8%
3289166 10.20.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.67 40.0 4.37e-01 93.8% 70.8%
3907235 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.67 50.0 4.32e-01 100.0% 50.7%
3788235 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.66 39.0 4.41e-01 100.0% 76.4%
3398675 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.66 42.0 4.70e-01 88.3% 80.9%
4304754 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.65 51.0 3.95e-01 81.4% 96.1%
3960488 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.65 39.0 4.23e-01 93.8% 70.6%
3898187 11.1.1.297 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.63 42.0 4.20e-01 100.0% 64.7%
4191031 5084.3.1.0 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.63 49.0 3.79e-01 80.0% 96.1%
4339003 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.63 49.0 3.84e-01 81.4% 99.0%
4636176 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.63 49.0 3.77e-01 81.4% 97.8%
3860289 11.1.1.297 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.63 47.0 4.68e-01 100.0% 74.2%
4162922 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 49.0 3.79e-01 81.4% 96.8%
3249250 4182.1.1.2 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin 0.62 40.0 4.79e-01 89.0% 100.0%
3277038 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.61 40.0 3.93e-01 93.1% 60.0%
3961820 10.20.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.60 36.0 4.04e-01 93.8% 77.3%
4668207 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 39.0 4.11e-01 100.0% 73.8%
3598105 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 44.0 4.75e-01 100.0% 93.3%
3955793 10.20.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.57 35.0 3.61e-01 88.3% 63.0%
3437261 10.32.1.194 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › APD1-4_N 0.57 44.0 4.87e-01 88.3% 100.0%
4379627 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 47.0 3.68e-01 88.3% 64.8%
3275901 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.57 43.0 4.76e-01 94.5% 99.1%
4883090 10.2.1.20 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Birna_VP2 0.56 51.0 3.62e-01 97.9% 82.6%
222219 10.2.1.40 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TNV_CP 0.55 48.0 4.40e-01 93.1% 92.0%
5074352 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 39.0 4.48e-01 87.6% 100.0%
3838829 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.55 43.0 4.02e-01 83.4% 91.9%
3740775 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 45.0 4.61e-01 99.3% 90.7%
3860841 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.54 44.0 3.76e-01 100.0% 54.3%
4947414 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 38.0 4.08e-01 97.2% 87.5%
3165307 5084.5.4.1 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.53 45.0 3.25e-01 92.4% 82.5%
4639413 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 43.0 4.08e-01 99.3% 74.1%
3252050 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 47.0 4.15e-01 99.3% 93.8%
3647427 10.1.1.11 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.52 38.0 3.99e-01 98.6% 85.4%
3476162 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.51 40.0 4.36e-01 88.3% 100.0%
3227607 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.50 43.0 3.39e-01 91.0% 92.4%
D3 medium residues 391-440
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3644046 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.51 34.0 3.15e-01 70.0% 84.6%