←Back to structures
FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00198
Bact-VirFFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00198
Identity
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-166
Domain cluster:
rep: scnpilot_solids2_trim150_scaffold_133_prodigal-single.1__X__X__00046__D2-153
D2
high
residues 212-320
Domain cluster:
rep: KJ803031.1__AID16847.1__vBDshPR2C_32__00032__D58-159
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c5eA00 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.65 | 48.0 | 5.10e-01 | 100.0% | 88.4% |
| 6xgqb01 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.63 | 49.0 | 5.29e-01 | 91.7% | 95.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2559744 | 70.4.1.2 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr | 0.78 | 40.0 | 5.42e-01 | 71.6% | 93.2% |
| 5083719 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.70 | 65.0 | 6.19e-01 | 100.0% | 96.8% |
| 4937267 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.67 | 61.0 | 5.95e-01 | 98.2% | 95.8% |
D3
high
residues 561-671
Domain cluster:
rep: IMGVR_UViG_3300015214_002962-3300015214-Ga0172382_100065621__D24-131