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FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00236
Bact-VirFFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00236
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 119-217
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00346__D9-97
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wozB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 59.0 | 4.58e-01 | 100.0% | 86.9% |
| 4c0eA01 | 1.25.40.790 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.64 | 56.0 | 4.15e-01 | 100.0% | 76.0% |
| 1eguA02 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.64 | 56.0 | 3.83e-01 | 100.0% | 55.6% |
| 3vldA02 | 1.25.40.580 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 55.0 | 4.86e-01 | 100.0% | 90.2% |
| 3ut4A00 | 1.25.40.750 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Domain of unknown function DUF5071 | 0.62 | 53.0 | 4.95e-01 | 99.0% | 100.0% |
| 3aqlA02 | 1.10.3090.10 | Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 | 0.56 | 49.0 | 3.73e-01 | 100.0% | 87.1% |
| 2pftA00 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.56 | 48.0 | 3.12e-01 | 100.0% | 45.5% |
| 5an3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 44.0 | 4.05e-01 | 92.9% | 82.2% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 42.0 | 3.58e-01 | 93.9% | 86.6% |
| 2a0uB01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.52 | 35.0 | 3.11e-01 | 71.7% | 61.3% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.51 | 40.0 | 3.28e-01 | 86.9% | 88.5% |
| 1w2wA00 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.51 | 39.0 | 3.10e-01 | 81.8% | 56.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3267294 | 109.4.1.330 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BIG2_C | 0.70 | 62.0 | 4.56e-01 | 100.0% | 96.7% |
| 3375146 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 61.0 | 3.42e-01 | 100.0% | 21.2% |
| 4003476 | 109.4.1.1710 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7627 | 0.68 | 57.0 | 4.74e-01 | 91.9% | 100.0% |
| 3695216 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 58.0 | 3.75e-01 | 100.0% | 47.7% |
| 3709914 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 58.0 | 4.02e-01 | 100.0% | 64.2% |
| 3504072 | 109.4.1.324 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Proteasom_PSMB | 0.66 | 58.0 | 3.87e-01 | 100.0% | 42.9% |
| 3679011 | 109.4.1.457 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Urb2 | 0.65 | 57.0 | 3.12e-01 | 100.0% | 16.2% |
| 3979534 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 57.0 | 4.19e-01 | 100.0% | 45.4% |
| 3429050 | 109.4.1.295 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COP9_hel_rpt | 0.64 | 55.0 | 3.99e-01 | 100.0% | 56.1% |
| 3506230 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 55.0 | 4.35e-01 | 98.0% | 73.3% |
| 3902097 | 109.4.1.1558 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2428, TPR_Trm732, TPR_Trm732_C | 0.63 | 55.0 | 3.08e-01 | 100.0% | 12.5% |
| 3741923 | 109.4.1.335 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SEN1_N | 0.62 | 50.0 | 4.15e-01 | 89.9% | 77.4% |
| 3395990 | 109.4.1.295 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COP9_hel_rpt | 0.61 | 53.0 | 3.80e-01 | 99.0% | 55.8% |
| 3342169 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 53.0 | 4.10e-01 | 100.0% | 91.3% |
| 3872151 | 109.4.1.1366 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DOCK_C-D_N, PF28208 | 0.61 | 53.0 | 3.45e-01 | 100.0% | 50.1% |
| 3627697 | 109.4.1.1307 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps52_CC, Vps52_C | 0.54 | 47.0 | 2.94e-01 | 100.0% | 46.5% |
| 4132603 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.51 | 38.0 | 3.46e-01 | 81.8% | 77.2% |