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FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00326
Bact-VirFFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00326
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 185-230
Domain cluster:
rep: JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00308__D191-235
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1owfA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.85 | 58.0 | 4.50e-01 | 71.7% | 34.4% |
| 3e1sA01 | 1.10.10.2220 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.84 | 75.0 | 5.85e-01 | 100.0% | 57.9% |
| 1lzwA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.82 | 67.0 | 5.28e-01 | 95.7% | 45.1% |
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.82 | 70.0 | 6.60e-01 | 100.0% | 96.6% |
| 3s64A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.82 | 71.0 | 5.93e-01 | 100.0% | 70.4% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.79 | 63.0 | 6.51e-01 | 93.5% | 100.0% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 67.0 | 5.63e-01 | 100.0% | 58.5% |
| 3fdiB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 63.0 | 4.18e-01 | 89.1% | 70.4% |
| 4d3pA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.77 | 61.0 | 4.24e-01 | 87.0% | 79.6% |
| 3lmmB05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 5.88e-01 | 100.0% | 70.5% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.76 | 65.0 | 5.18e-01 | 100.0% | 62.9% |
| 1sd4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 63.0 | 5.78e-01 | 100.0% | 75.0% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.76 | 67.0 | 5.37e-01 | 100.0% | 51.7% |
| 3g2bA00 | 1.10.10.1150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) | 0.75 | 62.0 | 5.09e-01 | 97.8% | 51.1% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 61.0 | 6.05e-01 | 100.0% | 88.0% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 61.0 | 5.59e-01 | 100.0% | 68.3% |
| 4xaxB02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.73 | 60.0 | 4.73e-01 | 93.5% | 97.0% |
| 1rykA00 | 1.10.1470.10 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ | 0.73 | 63.0 | 5.48e-01 | 95.7% | 69.6% |
| 2mh2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 60.0 | 5.52e-01 | 100.0% | 78.1% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 58.0 | 5.78e-01 | 93.5% | 89.6% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 59.0 | 5.04e-01 | 100.0% | 59.8% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 53.0 | 5.30e-01 | 100.0% | 81.2% |
| 1o4xA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 58.0 | 5.57e-01 | 100.0% | 83.3% |
| 2ys9A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 58.0 | 5.12e-01 | 97.8% | 62.9% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 56.0 | 4.92e-01 | 100.0% | 62.8% |
| 1le8A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 56.0 | 5.50e-01 | 100.0% | 84.9% |
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 5.32e-01 | 97.8% | 82.8% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.68 | 54.0 | 4.55e-01 | 100.0% | 68.1% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 55.0 | 4.93e-01 | 100.0% | 63.4% |
| 1e3oC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 52.0 | 5.16e-01 | 89.1% | 83.3% |
| 2ecbA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 55.0 | 5.40e-01 | 100.0% | 88.2% |
| 2gxaE01 | 1.10.10.510 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain | 0.67 | 56.0 | 4.93e-01 | 100.0% | 75.3% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.65 | 55.0 | 3.90e-01 | 100.0% | 34.2% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 54.0 | 4.65e-01 | 100.0% | 74.4% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 52.0 | 4.65e-01 | 100.0% | 60.5% |
| 1bw5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 52.0 | 4.81e-01 | 100.0% | 74.2% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 44.0 | 3.21e-01 | 71.7% | 26.0% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 52.0 | 4.51e-01 | 97.8% | 57.7% |
| 2k89A00 | 3.10.20.870 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain | 0.64 | 52.0 | 4.49e-01 | 100.0% | 61.3% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 43.0 | 3.39e-01 | 73.9% | 72.0% |
| 7ae2A01 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.61 | 44.0 | 3.25e-01 | 80.4% | 83.2% |
| 1n0uA06 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.61 | 50.0 | 3.56e-01 | 100.0% | 30.1% |
| 4dccA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 50.0 | 4.47e-01 | 100.0% | 74.3% |
| 1fi2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 50.0 | 3.33e-01 | 95.7% | 57.2% |
| 1wh5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 48.0 | 4.23e-01 | 100.0% | 70.0% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 48.0 | 4.45e-01 | 100.0% | 77.6% |
| 2aamC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 52.0 | 3.20e-01 | 100.0% | 20.6% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.59 | 45.0 | 3.98e-01 | 89.1% | 70.7% |
| 6fv3C01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 48.0 | 2.97e-01 | 100.0% | 28.4% |
| 7crnA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 44.0 | 2.87e-01 | 97.8% | 61.1% |
| 1hx8A01 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 46.0 | 3.49e-01 | 100.0% | 51.7% |
| 4j7zF00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.53 | 44.0 | 3.64e-01 | 100.0% | 56.4% |
| 2yweA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 3.09e-01 | 100.0% | 41.4% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1175749 | 101.1.2.145 ↗ | alpha arrays › HTH › HTH › winged helix domain › HHH_4 | 0.84 | 75.0 | 6.04e-01 | 100.0% | 64.0% |
| 3310491 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 71.0 | 6.50e-01 | 95.7% | 76.7% |
| 4995680 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.83 | 74.0 | 6.76e-01 | 100.0% | 90.0% |
| 4944767 | 101.1.2.883 ↗ | alpha arrays › HTH › HTH › winged helix domain › Radical_SAM | 0.83 | 70.0 | 5.97e-01 | 95.7% | 61.3% |
| 4965236 | 101.1.2.952 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF29290 | 0.83 | 71.0 | 6.61e-01 | 100.0% | 81.7% |
| 4972388 | 101.1.2.949 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28863 | 0.82 | 71.0 | 4.68e-01 | 100.0% | 24.7% |
| 4941656 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 73.0 | 6.03e-01 | 100.0% | 62.5% |
| 4999433 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.82 | 68.0 | 6.71e-01 | 95.7% | 90.0% |
| 5067099 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.81 | 70.0 | 4.98e-01 | 97.8% | 40.0% |
| 3782428 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 69.0 | 5.18e-01 | 100.0% | 43.3% |
| 5010323 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 69.0 | 6.42e-01 | 100.0% | 96.7% |
| 5004914 | 101.35.1.40 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF1699 | 0.81 | 66.0 | 6.16e-01 | 93.5% | 77.6% |
| 5053497 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 68.0 | 6.31e-01 | 100.0% | 85.0% |
| 4928641 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.80 | 68.0 | 5.79e-01 | 95.7% | 60.0% |
| 5044812 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 70.0 | 4.45e-01 | 100.0% | 61.8% |
| 5058906 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 69.0 | 5.74e-01 | 97.8% | 66.3% |
| 4044190 | 308.1.1.2 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › ClpS | 0.80 | 65.0 | 5.06e-01 | 97.8% | 43.2% |
| 5076076 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.80 | 69.0 | 5.11e-01 | 100.0% | 40.0% |
| 4973586 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.79 | 67.0 | 4.60e-01 | 100.0% | 28.2% |
| 4971669 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 68.0 | 4.80e-01 | 100.0% | 35.2% |
| 4984847 | 101.1.2.128 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2582 | 0.79 | 67.0 | 6.09e-01 | 100.0% | 75.4% |
| 3243495 | 101.1.1.289 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB | 0.79 | 68.0 | 6.47e-01 | 100.0% | 90.9% |
| 4199578 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.78 | 67.0 | 4.02e-01 | 100.0% | 27.6% |
| 4983508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 65.0 | 5.77e-01 | 97.8% | 67.1% |
| 3741065 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 65.0 | 5.27e-01 | 100.0% | 57.9% |
| 4224260 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 67.0 | 5.35e-01 | 100.0% | 49.5% |
| 3931388 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 65.0 | 6.23e-01 | 100.0% | 81.8% |
| 1169399 | 101.35.1.2 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Lipoprotein_Ltp | 0.77 | 63.0 | 6.18e-01 | 100.0% | 84.6% |
| 4449615 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.77 | 62.0 | 5.14e-01 | 95.7% | 51.1% |
| 5021067 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 64.0 | 5.05e-01 | 100.0% | 48.6% |
| 4959424 | 103.6.1.0 ↗ | alpha arrays › RuvA-C › FGAM synthase PurL, linker domain › FGAM synthase PurL, linker domain | 0.77 | 63.0 | 6.03e-01 | 93.5% | 87.3% |
| 5074546 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 67.0 | 5.46e-01 | 100.0% | 57.6% |
| 4379527 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.76 | 62.0 | 5.23e-01 | 97.8% | 54.1% |
| 4976919 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.75 | 63.0 | 5.02e-01 | 100.0% | 81.0% |
| 4026719 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 63.0 | 4.67e-01 | 100.0% | 42.4% |
| 3989662 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.75 | 61.0 | 4.62e-01 | 100.0% | 38.4% |
| 3243507 | 101.1.1.289 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB | 0.75 | 63.0 | 5.75e-01 | 100.0% | 75.4% |
| 4983598 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 62.0 | 5.65e-01 | 100.0% | 81.5% |
| 4406214 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.74 | 61.0 | 4.97e-01 | 97.8% | 49.5% |
| 5049455 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.74 | 62.0 | 4.49e-01 | 100.0% | 35.0% |
| 4946699 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 61.0 | 5.05e-01 | 100.0% | 58.4% |
| 3893 | 132.3.1.1 ↗ | alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ › CsbD | 0.73 | 63.0 | 5.48e-01 | 95.7% | 69.6% |
| 3281058 | 101.35.1.10 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF4287 | 0.73 | 60.0 | 5.61e-01 | 95.7% | 78.3% |
| 3694221 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.73 | 60.0 | 5.66e-01 | 100.0% | 80.0% |
| 4586835 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.73 | 60.0 | 5.54e-01 | 100.0% | 73.8% |
| 4102625 | 132.3.1.1 ↗ | alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ › CsbD | 0.73 | 63.0 | 5.78e-01 | 95.7% | 76.7% |
| 4966213 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 59.0 | 5.39e-01 | 95.7% | 72.3% |
| 4213222 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.73 | 61.0 | 5.57e-01 | 100.0% | 75.0% |
| 5057920 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.72 | 61.0 | 5.09e-01 | 100.0% | 58.8% |
| 3813940 | 101.35.1.6 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 | 0.72 | 59.0 | 5.46e-01 | 100.0% | 75.4% |
| 4464648 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.72 | 61.0 | 5.57e-01 | 100.0% | 70.8% |
| 4952808 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 60.0 | 5.80e-01 | 100.0% | 83.6% |
| 4957413 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.72 | 59.0 | 5.86e-01 | 97.8% | 90.0% |
| 3572716 | 101.1.1.55 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homez | 0.71 | 58.0 | 5.93e-01 | 100.0% | 100.0% |
| 4929489 | 101.1.2.897 ↗ | alpha arrays › HTH › HTH › winged helix domain › Zn_ribbon_2 | 0.71 | 60.0 | 5.43e-01 | 100.0% | 100.0% |
| 5003693 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 58.0 | 5.35e-01 | 100.0% | 70.8% |
| 4932241 | 2007.1.2.56 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF116 | 0.70 | 59.0 | 4.01e-01 | 100.0% | 27.2% |
| 3227458 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.69 | 56.0 | 5.22e-01 | 97.8% | 73.3% |
| 3655985 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.69 | 58.0 | 4.25e-01 | 95.7% | 40.8% |
| 3579249 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 58.0 | 4.86e-01 | 100.0% | 68.2% |
| 3538312 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.69 | 55.0 | 5.47e-01 | 100.0% | 90.0% |
| 3768463 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 56.0 | 5.31e-01 | 100.0% | 78.3% |
| 3525151 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 55.0 | 5.54e-01 | 95.7% | 100.0% |
| 3523991 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.68 | 56.0 | 5.02e-01 | 100.0% | 65.7% |
| 3219867 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 54.0 | 4.64e-01 | 100.0% | 52.9% |
| 3768461 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.68 | 55.0 | 4.71e-01 | 100.0% | 60.0% |
| 3967801 | 2006.1.3.16 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DUF1835 | 0.67 | 55.0 | 3.73e-01 | 95.7% | 50.3% |
| 3571988 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.67 | 54.0 | 4.03e-01 | 100.0% | 42.1% |
| 3240028 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.66 | 55.0 | 5.27e-01 | 100.0% | 89.1% |
| 3834352 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.66 | 54.0 | 3.14e-01 | 100.0% | 11.2% |
| 3217696 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 54.0 | 4.98e-01 | 100.0% | 73.8% |
| 4039740 | 3317.1.1.2 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB | 0.65 | 44.0 | 3.95e-01 | 76.1% | 49.2% |
| 3507798 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.60 | 47.0 | 4.39e-01 | 95.7% | 90.8% |
| 3486574 | 101.1.1.50 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Nop16 | 0.59 | 47.0 | 4.50e-01 | 100.0% | 81.7% |
| 4946659 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 48.0 | 3.79e-01 | 100.0% | 42.7% |
| 4948093 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 38.0 | 3.88e-01 | 71.7% | 68.9% |
| 10305 | 7516.1.1.25 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › TcdA_TcdB | 0.58 | 48.0 | 2.76e-01 | 100.0% | 9.8% |
| 3924597 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.57 | 45.0 | 4.16e-01 | 100.0% | 92.9% |
| 3588464 | 604.39.1.5 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt | 0.56 | 45.0 | 3.17e-01 | 97.8% | 67.1% |
D2
medium
residues 4-104
Domain cluster:
rep: NC_020158__YP_007378970.1__HVTV1-65__00064__D54-164
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10263.16 best | SprT-like | 52.7 | 4.90e-14 | 90.1% | 83.2% |
D3
medium
residues 126-166
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6rxpA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.76 | 60.0 | 4.63e-01 | 97.6% | 38.9% |
| 6hoyA02 | 2.20.28.200 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.76 | 66.0 | 6.21e-01 | 97.6% | 85.7% |
| 3u31A02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.74 | 63.0 | 4.76e-01 | 97.6% | 43.4% |
| 2zt5A02 | 3.30.40.230 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.73 | 62.0 | 4.98e-01 | 100.0% | 91.7% |
| 1yc5A02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.73 | 65.0 | 5.02e-01 | 97.6% | 47.6% |
| 3ir9A02 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.70 | 60.0 | 4.30e-01 | 100.0% | 33.3% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.69 | 53.0 | 5.51e-01 | 97.6% | 94.6% |
| 3puaA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.67 | 51.0 | 3.11e-01 | 100.0% | 12.9% |
| 2g3mA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.67 | 46.0 | 3.77e-01 | 95.1% | 40.0% |
| 3a43B02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.66 | 49.0 | 5.22e-01 | 100.0% | 100.0% |
| 1gaxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.65 | 54.0 | 3.19e-01 | 100.0% | 11.8% |
| 6nw1A00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.65 | 52.0 | 5.11e-01 | 97.6% | 97.8% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.64 | 48.0 | 4.51e-01 | 90.2% | 76.8% |
| 3bxwA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.63 | 52.0 | 4.84e-01 | 100.0% | 100.0% |
| 4ba0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 47.0 | 4.37e-01 | 95.1% | 66.7% |
| 5i0fB04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 48.0 | 3.79e-01 | 100.0% | 41.7% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.61 | 48.0 | 4.70e-01 | 100.0% | 97.9% |
| 1owqA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 48.0 | 4.18e-01 | 100.0% | 98.5% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.57 | 41.0 | 3.35e-01 | 78.0% | 57.7% |
| 4ecnA02 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.57 | 50.0 | 3.59e-01 | 100.0% | 37.7% |
| 6e4nA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 41.0 | 3.74e-01 | 92.7% | 94.4% |
| 2jqzA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 43.0 | 3.23e-01 | 92.7% | 93.9% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 43.0 | 3.90e-01 | 100.0% | 58.0% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 44.0 | 4.10e-01 | 100.0% | 71.2% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 49.0 | 4.09e-01 | 100.0% | 67.6% |
| 3htkC02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 43.0 | 4.12e-01 | 100.0% | 79.6% |
| 3zo9B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 44.0 | 3.40e-01 | 100.0% | 38.9% |
| 5hkxA04 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 41.0 | 4.08e-01 | 100.0% | 86.4% |
| 2cklA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 42.0 | 3.45e-01 | 100.0% | 44.9% |
| 4oifA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 37.0 | 3.30e-01 | 97.6% | 48.4% |
| 3nuhB02 | 3.30.300.370 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.54 | 45.0 | 3.33e-01 | 100.0% | 91.7% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 42.0 | 3.76e-01 | 100.0% | 60.9% |
| 2lvhA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 45.0 | 4.46e-01 | 100.0% | 93.3% |
| 1jceA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 40.0 | 2.91e-01 | 100.0% | 32.0% |
| 4dyoA02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.52 | 42.0 | 3.06e-01 | 100.0% | 66.9% |
| 5d0iB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 36.0 | 3.51e-01 | 92.7% | 64.7% |
| 2yuxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.11e-01 | 100.0% | 36.1% |
| 1e29A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.52 | 41.0 | 2.99e-01 | 97.6% | 86.7% |
| 2q8kA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.74e-01 | 97.6% | 100.0% |
| 5vmzA03 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 42.0 | 4.27e-01 | 95.1% | 100.0% |
| 6hmjA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 36.0 | 2.80e-01 | 80.5% | 88.6% |
| 4qglA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 38.0 | 2.70e-01 | 100.0% | 74.7% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4401347 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.84 | 76.0 | 6.87e-01 | 100.0% | 76.4% |
| 4136939 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.83 | 72.0 | 7.31e-01 | 95.1% | 97.5% |
| 4083015 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.81 | 71.0 | 7.16e-01 | 97.6% | 100.0% |
| 4492070 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.80 | 66.0 | 6.75e-01 | 92.7% | 95.0% |
| 4019073 | 4154.1.1.0 ↗ | beta duplicates or obligate multimers › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F-DP heterodimerization region | 0.80 | 67.0 | 5.12e-01 | 100.0% | 62.0% |
| 3587273 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 69.0 | 6.11e-01 | 100.0% | 85.0% |
| 4028011 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 64.0 | 6.34e-01 | 100.0% | 93.3% |
| 3751549 | 375.1.1.18 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 | 0.77 | 65.0 | 5.25e-01 | 92.7% | 50.7% |
| 4890082 | 375.1.1.18 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 | 0.77 | 66.0 | 6.63e-01 | 95.1% | 92.9% |
| 5068907 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 64.0 | 6.31e-01 | 100.0% | 91.1% |
| 4374737 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.75 | 65.0 | 3.91e-01 | 97.6% | 20.5% |
| 4932421 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 61.0 | 5.84e-01 | 100.0% | 80.0% |
| 4962153 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.75 | 61.0 | 6.00e-01 | 97.6% | 91.1% |
| 4505111 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 64.0 | 5.87e-01 | 100.0% | 90.9% |
| 4963987 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.74 | 64.0 | 3.91e-01 | 97.6% | 16.4% |
| 5037654 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 63.0 | 6.18e-01 | 97.6% | 88.9% |
| 3594538 | 2003.1.4.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain | 0.74 | 63.0 | 3.76e-01 | 97.6% | 13.6% |
| 3707610 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.73 | 63.0 | 3.75e-01 | 97.6% | 13.1% |
| 4650888 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.73 | 65.0 | 3.94e-01 | 97.6% | 16.3% |
| 2163511 | 375.1.1.18 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 | 0.73 | 62.0 | 6.23e-01 | 97.6% | 95.2% |
| 3484040 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 63.0 | 5.29e-01 | 97.6% | 91.4% |
| 5052386 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 61.0 | 6.21e-01 | 92.7% | 97.5% |
| 4206445 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.73 | 64.0 | 3.88e-01 | 97.6% | 15.7% |
| 4983067 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.73 | 63.0 | 5.96e-01 | 100.0% | 82.0% |
| 5039851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 61.0 | 6.25e-01 | 97.6% | 100.0% |
| 3963491 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 58.0 | 5.92e-01 | 95.1% | 97.5% |
| 3719787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 59.0 | 6.03e-01 | 97.6% | 100.0% |
| 1543924 | 375.1.1.18 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 | 0.72 | 63.0 | 6.25e-01 | 97.6% | 95.3% |
| 4940336 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.72 | 61.0 | 5.31e-01 | 92.7% | 63.3% |
| 5027517 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 63.0 | 6.13e-01 | 100.0% | 91.1% |
| 4990489 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 61.0 | 5.75e-01 | 100.0% | 90.0% |
| 3598330 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 60.0 | 4.04e-01 | 100.0% | 26.2% |
| 4964333 | 375.1.1.339 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7560 | 0.70 | 55.0 | 5.62e-01 | 95.1% | 92.5% |
| 3287891 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.70 | 60.0 | 3.64e-01 | 97.6% | 15.6% |
| 4054423 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 60.0 | 5.89e-01 | 100.0% | 93.3% |
| 3704672 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 54.0 | 5.53e-01 | 87.8% | 97.5% |
| 4979655 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.68 | 55.0 | 4.06e-01 | 100.0% | 33.6% |
| 3504586 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.67 | 56.0 | 3.87e-01 | 100.0% | 27.1% |
| 3730501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 53.0 | 5.19e-01 | 90.2% | 82.2% |
| 3340123 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.66 | 55.0 | 4.43e-01 | 100.0% | 46.7% |
| 3600775 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 56.0 | 5.49e-01 | 100.0% | 93.3% |
| 3445679 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.66 | 50.0 | 4.89e-01 | 100.0% | 81.2% |
| 4982450 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.65 | 53.0 | 3.96e-01 | 100.0% | 34.2% |
| 4945555 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 47.0 | 4.95e-01 | 97.6% | 100.0% |
| 5065494 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 45.0 | 4.34e-01 | 97.6% | 72.0% |
| 4985088 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.61 | 50.0 | 3.70e-01 | 100.0% | 35.0% |
| 3263784 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 49.0 | 3.30e-01 | 100.0% | 22.8% |
| 3260234 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.60 | 44.0 | 3.29e-01 | 100.0% | 28.5% |
| 3440950 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.58 | 45.0 | 4.60e-01 | 92.7% | 97.5% |
| 3676856 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 42.0 | 3.96e-01 | 100.0% | 63.1% |
| 3225382 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 42.0 | 3.97e-01 | 100.0% | 64.6% |
| 3885453 | 386.1.1.257 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_Z280C_D | 0.57 | 44.0 | 4.47e-01 | 100.0% | 90.0% |
| 3867225 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 42.0 | 3.66e-01 | 100.0% | 47.5% |
| 3671724 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 41.0 | 3.94e-01 | 100.0% | 65.0% |
| 3622838 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 48.0 | 3.76e-01 | 100.0% | 48.4% |
| 3397810 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 41.0 | 3.22e-01 | 97.6% | 31.7% |
| 3541494 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 42.0 | 4.05e-01 | 100.0% | 69.5% |
| 3597215 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 42.0 | 3.53e-01 | 100.0% | 43.3% |
| 3376798 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.56 | 42.0 | 3.92e-01 | 92.7% | 65.0% |
| 3998169 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.56 | 41.0 | 3.87e-01 | 100.0% | 63.1% |
| 3266509 | 376.1.1.15 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse | 0.56 | 45.0 | 3.68e-01 | 100.0% | 47.8% |
| 3743358 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 46.0 | 4.13e-01 | 95.1% | 73.3% |
| 4014325 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 45.0 | 3.95e-01 | 100.0% | 60.0% |
| 4885815 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 45.0 | 4.14e-01 | 92.7% | 100.0% |
| 3229025 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 42.0 | 3.72e-01 | 100.0% | 53.3% |
| 3517305 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.56 | 49.0 | 3.73e-01 | 100.0% | 50.5% |
| 3911109 | 386.1.1.290 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zf-C2H2_ZNF451_C | 0.56 | 45.0 | 3.62e-01 | 100.0% | 44.7% |
| 3637145 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 44.0 | 3.65e-01 | 100.0% | 46.7% |
| 3713600 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.56 | 40.0 | 3.51e-01 | 100.0% | 45.6% |
| 3629945 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 48.0 | 3.49e-01 | 100.0% | 44.3% |
| 3782724 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.55 | 42.0 | 3.94e-01 | 100.0% | 72.9% |
| 3194019 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.55 | 40.0 | 3.49e-01 | 97.6% | 47.1% |
| 3414000 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 32.0 | 3.10e-01 | 80.5% | 46.0% |
| 3299216 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.54 | 47.0 | 3.73e-01 | 100.0% | 58.0% |
| 3483496 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 44.0 | 4.37e-01 | 100.0% | 86.7% |
| 3901472 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 39.0 | 2.63e-01 | 90.2% | 73.3% |
| 3940081 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.54 | 39.0 | 2.61e-01 | 92.7% | 40.0% |
| 3816489 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.53 | 41.0 | 3.70e-01 | 100.0% | 67.1% |
| 3923587 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 44.0 | 4.30e-01 | 95.1% | 93.3% |
| 4028586 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.53 | 40.0 | 3.45e-01 | 100.0% | 50.6% |
| 3522638 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 43.0 | 4.41e-01 | 97.6% | 97.5% |
| 3581478 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 44.0 | 3.94e-01 | 100.0% | 76.7% |
| 3245932 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 42.0 | 4.10e-01 | 92.7% | 93.3% |
| 3562042 | 145.1.1.64 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › PF27582 | 0.51 | 41.0 | 4.17e-01 | 92.7% | 100.0% |
| 3728475 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.51 | 39.0 | 2.55e-01 | 90.2% | 16.2% |
| 4021522 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 38.0 | 3.72e-01 | 90.2% | 74.0% |