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FFC_09252017_16_scaffold_4_prodigal-single.1__X__X__00041

Bact-Vir

FFC_09252017_16_scaffold_4_prodigal-single.1__X__X__00041

Identity

Kingdom:
phage

Quality

64.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-229
PDB
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2b3wA00 1.10.357.40 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like 0.76 59.0 6.17e-01 88.5% 86.9%
8bauA01 1.10.357.40 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like 0.69 57.0 5.74e-01 85.8% 96.1%
4pkcC00 6.20.90.20 Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit 0.60 15.0 3.03e-01 74.9% 87.8%
1s7mA03 2.20.25.140 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.59 10.0 2.67e-01 72.7% 78.6%
2pw9A01 4.10.80.30 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 6 0.58 12.0 2.56e-01 75.4% 100.0%
4k3cA01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.54 24.0 3.41e-01 85.2% 89.0%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.51 23.0 3.26e-01 76.5% 93.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3705063 4308.1.1.1 a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR 0.77 60.0 6.70e-01 88.0% 100.0%
3616804 4308.1.1.1 a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR 0.68 57.0 5.66e-01 87.4% 96.3%