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FFC_09252017_16_scaffold_4_prodigal-single.1__X__X__00088
Bact-VirFFC_09252017_16_scaffold_4_prodigal-single.1__X__X__00088
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-140
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r1kB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 45.0 | 4.23e-01 | 75.2% | 90.4% |
| 1ygyB03 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.61 | 42.0 | 3.95e-01 | 70.8% | 88.5% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 45.0 | 4.21e-01 | 77.9% | 81.7% |
| 2a15A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 41.0 | 3.94e-01 | 75.2% | 96.2% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.57 | 41.0 | 3.09e-01 | 75.2% | 45.5% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.56 | 32.0 | 3.70e-01 | 70.8% | 79.7% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 44.0 | 4.39e-01 | 100.0% | 89.5% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 3.29e-01 | 97.3% | 84.1% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 44.0 | 2.97e-01 | 93.8% | 73.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4380331 | 295.1.1.27 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 | 0.67 | 34.0 | 4.20e-01 | 96.5% | 78.6% |
| 4927378 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.66 | 46.0 | 4.50e-01 | 71.7% | 97.6% |
| 3707862 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.62 | 36.0 | 4.10e-01 | 100.0% | 78.8% |
| 3519971 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.61 | 40.0 | 3.43e-01 | 73.5% | 42.3% |
| 5044451 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 39.0 | 4.59e-01 | 70.8% | 96.2% |
| 3714509 | 220.1.1.303 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26278 | 0.58 | 39.0 | 3.53e-01 | 100.0% | 49.0% |
| 4927872 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.58 | 42.0 | 4.20e-01 | 99.1% | 73.3% |
| 4973985 | 298.3.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like | 0.57 | 40.0 | 3.89e-01 | 73.5% | 96.2% |
| 2033787 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.56 | 40.0 | 3.88e-01 | 75.2% | 95.5% |
| 3784777 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.56 | 40.0 | 3.57e-01 | 75.2% | 58.8% |
| 3991020 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.55 | 24.0 | 2.85e-01 | 87.6% | 57.3% |
| 3629857 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.54 | 43.0 | 2.93e-01 | 86.7% | 58.6% |
| 1095153 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 47.0 | 3.21e-01 | 94.7% | 73.2% |
| 3185727 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.53 | 43.0 | 3.07e-01 | 100.0% | 29.6% |
| 3927761 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.53 | 38.0 | 2.81e-01 | 76.1% | 68.2% |
| 3783070 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.52 | 47.0 | 3.27e-01 | 100.0% | 38.6% |
| 3477607 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 46.0 | 2.79e-01 | 100.0% | 15.4% |
| 3272437 | 5.1.4.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 | 0.50 | 45.0 | 2.99e-01 | 100.0% | 33.7% |
| 3257390 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.50 | 42.0 | 3.07e-01 | 100.0% | 33.2% |