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FFC_09252017_16_scaffold_4_prodigal-single.1__X__X__00116
Bact-VirFFC_09252017_16_scaffold_4_prodigal-single.1__X__X__00116
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-192
Domain cluster:
rep: NC_005178.1__NP_938253.1__D3112p46__00046__D2-182
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6nu8A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.67 | 35.0 | 4.01e-01 | 80.6% | 65.7% |
| 1hlcA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 34.0 | 4.05e-01 | 88.5% | 72.9% |
| 4fffA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.62 | 34.0 | 3.73e-01 | 81.2% | 63.4% |
| 6e20A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 34.0 | 3.97e-01 | 88.5% | 74.2% |
| 1a78A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 34.0 | 3.92e-01 | 81.7% | 73.1% |
| 1c1fA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 34.0 | 3.90e-01 | 88.5% | 74.1% |
| 5z5dA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 33.0 | 3.26e-01 | 81.2% | 48.7% |
| 3i8tA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 33.0 | 3.77e-01 | 88.5% | 69.3% |
| 5nldB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 33.0 | 3.76e-01 | 81.7% | 69.6% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 34.0 | 3.97e-01 | 99.0% | 80.3% |
| 2wsuB02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 32.0 | 3.64e-01 | 81.7% | 70.8% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 34.0 | 3.50e-01 | 97.4% | 63.3% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.55 | 33.0 | 3.74e-01 | 90.6% | 78.6% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 29.0 | 3.68e-01 | 94.2% | 91.2% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 34.0 | 3.10e-01 | 80.6% | 46.3% |
| 4hfsA00 | 2.60.120.1270 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 33.0 | 3.33e-01 | 88.5% | 56.7% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 36.0 | 3.93e-01 | 90.1% | 81.9% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 32.0 | 2.85e-01 | 88.0% | 42.8% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.52 | 29.0 | 3.66e-01 | 85.9% | 93.6% |
| 1avgI00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 31.0 | 3.47e-01 | 89.5% | 78.9% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3509387 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.63 | 34.0 | 4.09e-01 | 81.2% | 78.3% |
| 4024468 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.63 | 34.0 | 3.38e-01 | 88.5% | 48.0% |
| 2722036 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.63 | 34.0 | 3.91e-01 | 88.5% | 69.5% |
| 1269361 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.63 | 34.0 | 3.72e-01 | 81.2% | 62.2% |
| 4135248 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.63 | 34.0 | 4.03e-01 | 88.0% | 75.4% |
| 3259285 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.60 | 44.0 | 3.78e-01 | 75.9% | 83.8% |
| 2583626 | 331.3.1.14 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3568 | 0.59 | 28.0 | 3.45e-01 | 86.4% | 69.8% |
| 3245603 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.57 | 29.0 | 3.73e-01 | 80.6% | 83.6% |
| 3277839 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.56 | 36.0 | 3.96e-01 | 99.0% | 80.0% |
| 3578619 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.56 | 26.0 | 3.44e-01 | 90.1% | 79.0% |
| 3421095 | 3521.1.1.4 ↗ | a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › SWIM | 0.54 | 24.0 | 3.45e-01 | 73.8% | 88.9% |
| 2834340 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.53 | 35.0 | 3.99e-01 | 80.6% | 89.9% |
| 2070070 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.52 | 32.0 | 3.56e-01 | 90.6% | 76.4% |
| 3456597 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.51 | 30.0 | 3.21e-01 | 93.7% | 64.9% |
| 2392884 | 227.1.1.14 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › gp45-slide_C | 0.50 | 30.0 | 3.62e-01 | 88.5% | 91.7% |
D2
high
residues 262-303