←Back to structures
FFC_09252017_16_scaffold_6_prodigal-single.1__X__X__00108
Bact-VirFFC_09252017_16_scaffold_6_prodigal-single.1__X__X__00108
Identity
- Kingdom:
- phage
Quality
93.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-58
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.68 | 48.0 | 2.61e-01 | 90.7% | 4.8% |
| 6d6zA02 | 3.40.50.11440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain | 0.66 | 48.0 | 3.00e-01 | 93.0% | 14.7% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.65 | 46.0 | 2.67e-01 | 74.4% | 18.6% |
| 3t69A01 | 3.30.420.300 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain | 0.61 | 51.0 | 4.29e-01 | 95.3% | 60.0% |
| 3ll3B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 51.0 | 3.21e-01 | 100.0% | 86.9% |
| 4oxiA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 47.0 | 3.78e-01 | 97.7% | 72.4% |
| 3eqvA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 44.0 | 3.21e-01 | 88.4% | 75.9% |
| 4iknA01 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.56 | 48.0 | 3.37e-01 | 100.0% | 57.3% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 46.0 | 3.35e-01 | 100.0% | 94.8% |
| 4o5fA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 46.0 | 3.39e-01 | 100.0% | 88.2% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.55 | 37.0 | 3.14e-01 | 72.1% | 63.6% |
| 2itmA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 46.0 | 2.93e-01 | 97.7% | 87.6% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.54 | 46.0 | 2.91e-01 | 100.0% | 91.3% |
| 2gupA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 41.0 | 3.29e-01 | 100.0% | 40.2% |
| 1p1hB01 | 3.30.2360.10 | Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain | 0.53 | 36.0 | 2.47e-01 | 72.1% | 57.4% |
| 4aqsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 44.0 | 2.82e-01 | 100.0% | 82.5% |
| 2w40A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 44.0 | 2.78e-01 | 100.0% | 63.8% |
| 3tcaA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 40.0 | 3.31e-01 | 90.7% | 92.2% |
| 1cm5A00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.53 | 40.0 | 2.25e-01 | 90.7% | 19.4% |
| 4jdeA01 | 2.60.40.3820 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 38.0 | 3.01e-01 | 97.7% | 91.2% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 40.0 | 3.32e-01 | 100.0% | 78.4% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.52 | 38.0 | 2.59e-01 | 100.0% | 57.6% |
| 5h8yD02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.51 | 38.0 | 2.67e-01 | 100.0% | 38.9% |
| 1hezE00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 38.0 | 3.53e-01 | 88.4% | 65.6% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 38.0 | 3.14e-01 | 88.4% | 78.0% |
| 1kvdB00 | 3.30.44.10 | Alpha Beta › 2-Layer Sandwich › Smk Toxin, Beta chain › Smk Toxin, beta chain | 0.51 | 39.0 | 3.36e-01 | 90.7% | 96.1% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4663567 | 207.6.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Ice_nucleation | 0.76 | 64.0 | 3.54e-01 | 100.0% | 6.8% |
| 3999042 | 10.13.1.1 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase | 0.69 | 46.0 | 3.56e-01 | 81.4% | 31.6% |
| 3832573 | 221.1.1.235 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Zn_SUZ12 | 0.69 | 54.0 | 4.59e-01 | 86.0% | 94.3% |
| 3605971 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.67 | 58.0 | 4.35e-01 | 100.0% | 65.5% |
| 3797550 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.66 | 40.0 | 3.19e-01 | 72.1% | 28.2% |
| 5037264 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 54.0 | 4.30e-01 | 93.0% | 47.5% |
| 3652038 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.65 | 58.0 | 4.59e-01 | 100.0% | 91.8% |
| 3247149 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 49.0 | 4.09e-01 | 88.4% | 90.6% |
| 3574767 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.63 | 55.0 | 3.59e-01 | 100.0% | 59.5% |
| 3957585 | 2484.1.1.144 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 | 0.62 | 54.0 | 4.21e-01 | 100.0% | 62.1% |
| 5062579 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 54.0 | 4.51e-01 | 100.0% | 61.3% |
| 4492767 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 49.0 | 4.02e-01 | 100.0% | 72.9% |
| 3264605 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 48.0 | 4.14e-01 | 100.0% | 77.3% |
| 1574697 | 65.1.1.5 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › BAB2_0307-like_N | 0.58 | 43.0 | 4.08e-01 | 100.0% | 68.0% |
| 3252578 | 5.1.4.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 | 0.58 | 50.0 | 2.81e-01 | 97.7% | 12.0% |
| 4932849 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.57 | 49.0 | 3.66e-01 | 100.0% | 51.3% |
| 3745675 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.57 | 48.0 | 3.67e-01 | 100.0% | 50.9% |
| 4449990 | 60.1.1.12 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Treslin_M | 0.56 | 48.0 | 3.34e-01 | 100.0% | 66.7% |
| 3233673 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.56 | 50.0 | 3.05e-01 | 100.0% | 66.4% |
| 3674397 | 2485.1.1.82 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › ATP-synt_10 | 0.56 | 42.0 | 3.25e-01 | 88.4% | 36.8% |
| 3385823 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 40.0 | 2.89e-01 | 79.1% | 58.3% |
| 3443390 | 221.1.1.28 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SOK | 0.51 | 42.0 | 3.29e-01 | 100.0% | 49.5% |
| 5010079 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 38.0 | 2.90e-01 | 88.4% | 45.8% |
| 4383498 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.50 | 42.0 | 3.11e-01 | 97.7% | 38.3% |
| 4944151 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.50 | 41.0 | 2.64e-01 | 100.0% | 63.6% |
| 3411216 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.50 | 37.0 | 2.83e-01 | 93.0% | 34.0% |