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FFC_09252017_16_scaffold_6_prodigal-single.1__X__X__00139
Bact-VirFFC_09252017_16_scaffold_6_prodigal-single.1__X__X__00139
Identity
- Kingdom:
- phage
Quality
71.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-63
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z04B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.70 | 55.0 | 3.87e-01 | 85.5% | 81.7% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.69 | 53.0 | 4.29e-01 | 90.3% | 42.5% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 49.0 | 4.11e-01 | 91.9% | 43.5% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.65 | 52.0 | 3.80e-01 | 90.3% | 32.7% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 45.0 | 3.78e-01 | 75.8% | 71.6% |
| 2vgnA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.63 | 54.0 | 4.35e-01 | 100.0% | 63.0% |
| 1p90A00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.62 | 55.0 | 4.39e-01 | 100.0% | 63.4% |
| 3dddA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 42.0 | 3.29e-01 | 71.0% | 72.3% |
| 2qi2A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.62 | 54.0 | 4.46e-01 | 100.0% | 64.9% |
| 2re2A00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.61 | 54.0 | 4.42e-01 | 100.0% | 64.4% |
| 3obwA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.61 | 53.0 | 4.36e-01 | 100.0% | 66.9% |
| 1u7zC00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.61 | 49.0 | 3.40e-01 | 90.3% | 26.9% |
| 1mgpA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.61 | 55.0 | 4.40e-01 | 100.0% | 66.1% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.61 | 53.0 | 4.28e-01 | 100.0% | 68.9% |
| 3ga2A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.59 | 44.0 | 3.07e-01 | 88.7% | 22.0% |
| 1oygA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 51.0 | 3.09e-01 | 100.0% | 50.5% |
| 1aqcB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 41.0 | 3.43e-01 | 93.5% | 39.3% |
| 3a7kB00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 45.0 | 3.11e-01 | 90.3% | 60.5% |
| 1hjrA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 50.0 | 3.78e-01 | 100.0% | 58.9% |
| 3wknF00 | 6.20.50.120 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.57 | 33.0 | 3.66e-01 | 72.6% | 73.9% |
| 4d47A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 49.0 | 3.02e-01 | 100.0% | 49.6% |
| 3g7dA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 39.0 | 3.17e-01 | 72.6% | 90.3% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 45.0 | 3.72e-01 | 90.3% | 64.4% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.56 | 47.0 | 2.91e-01 | 100.0% | 37.9% |
| 3nyiA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.56 | 47.0 | 3.79e-01 | 100.0% | 72.3% |
| 3ow8C00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 51.0 | 3.21e-01 | 100.0% | 34.3% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.54 | 33.0 | 3.50e-01 | 75.8% | 67.9% |
| 4j87A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 48.0 | 3.01e-01 | 100.0% | 32.3% |
| 4fzxC00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 45.0 | 3.37e-01 | 100.0% | 54.5% |
| 2cxaA02 | 3.40.630.70 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal domain | 0.52 | 46.0 | 3.39e-01 | 100.0% | 76.8% |
| 2db9A01 | 3.90.70.200 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain | 0.52 | 35.0 | 2.81e-01 | 71.0% | 63.2% |
| 6a97C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 41.0 | 3.44e-01 | 100.0% | 74.0% |
| 5xrwA00 | 2.30.330.10 | Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like | 0.51 | 37.0 | 3.48e-01 | 79.0% | 74.7% |
| 3ey5A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 41.0 | 3.05e-01 | 88.7% | 69.7% |
| 8oqxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 41.0 | 3.45e-01 | 95.2% | 71.9% |
| 6tmfI00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.50 | 38.0 | 2.73e-01 | 85.5% | 67.8% |
| 1xeaA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 40.0 | 2.91e-01 | 90.3% | 80.2% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942150 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.76 | 57.0 | 5.02e-01 | 88.7% | 55.6% |
| 4536448 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 59.0 | 4.74e-01 | 100.0% | 64.2% |
| 3489587 | 2485.1.1.55 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FAF1 | 0.64 | 49.0 | 3.40e-01 | 88.7% | 50.4% |
| 3531333 | 220.1.1.35 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IQ_SEC7_PH | 0.63 | 49.0 | 3.75e-01 | 90.3% | 34.5% |
| 3804501 | 2484.1.1.165 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 54.0 | 3.61e-01 | 100.0% | 29.2% |
| 3363185 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.62 | 50.0 | 3.26e-01 | 93.5% | 19.7% |
| 3313861 | 4325.1.1.10 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF659 | 0.62 | 49.0 | 5.08e-01 | 87.1% | 100.0% |
| 5058066 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.62 | 54.0 | 4.46e-01 | 100.0% | 67.8% |
| 3315195 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.62 | 53.0 | 3.67e-01 | 100.0% | 33.0% |
| 5024996 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.62 | 55.0 | 4.53e-01 | 100.0% | 66.1% |
| 5036237 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.62 | 54.0 | 4.45e-01 | 100.0% | 72.2% |
| 3677504 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.62 | 53.0 | 4.30e-01 | 100.0% | 60.8% |
| 3342974 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.62 | 52.0 | 4.72e-01 | 100.0% | 88.9% |
| 3294876 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.61 | 52.0 | 3.76e-01 | 100.0% | 42.6% |
| 3677519 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.61 | 52.0 | 3.62e-01 | 100.0% | 33.0% |
| 3376912 | 2484.1.1.165 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 52.0 | 3.18e-01 | 100.0% | 19.1% |
| 3335943 | 2484.1.1.165 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 51.0 | 3.08e-01 | 100.0% | 16.2% |
| 4955184 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.61 | 53.0 | 4.32e-01 | 100.0% | 70.0% |
| 3460843 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.60 | 51.0 | 3.22e-01 | 100.0% | 21.2% |
| 3327916 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.60 | 51.0 | 3.25e-01 | 100.0% | 20.8% |
| 3592742 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 47.0 | 4.31e-01 | 100.0% | 63.3% |
| 3327232 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.60 | 50.0 | 3.32e-01 | 100.0% | 26.6% |
| 3289949 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 39.0 | 3.36e-01 | 71.0% | 39.0% |
| 3715021 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 51.0 | 3.66e-01 | 100.0% | 76.3% |
| 4998732 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.58 | 51.0 | 4.27e-01 | 100.0% | 73.6% |
| 3776593 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.58 | 39.0 | 2.41e-01 | 72.6% | 87.5% |
| 3241479 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.57 | 39.0 | 2.37e-01 | 71.0% | 85.5% |
| 4940069 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.57 | 49.0 | 3.81e-01 | 100.0% | 62.0% |
| 4936345 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 47.0 | 4.64e-01 | 100.0% | 91.4% |
| 4096721 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.55 | 45.0 | 3.72e-01 | 93.5% | 67.2% |
| 5046873 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 38.0 | 3.17e-01 | 72.6% | 85.7% |
| 5037792 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.54 | 39.0 | 3.54e-01 | 82.3% | 56.5% |
| 4960585 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.52 | 39.0 | 2.74e-01 | 82.3% | 35.1% |
| 3565594 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.51 | 36.0 | 2.28e-01 | 77.4% | 83.7% |
| 4034236 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 44.0 | 3.59e-01 | 100.0% | 92.5% |
| 3987799 | 4221.1.1.1 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › DUF1797 | 0.51 | 39.0 | 3.80e-01 | 88.7% | 95.7% |
| 3842593 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.50 | 42.0 | 3.00e-01 | 95.2% | 95.9% |
D2
high
residues 92-158
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.65 | 52.0 | 4.09e-01 | 85.1% | 73.3% |
| 7v7yA01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.62 | 51.0 | 3.39e-01 | 92.5% | 94.9% |
| 1rpyB00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 38.0 | 3.57e-01 | 73.1% | 50.0% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 44.0 | 2.86e-01 | 83.6% | 39.9% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 39.0 | 3.02e-01 | 71.6% | 91.7% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 40.0 | 3.42e-01 | 76.1% | 62.7% |
| 4n01A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.56 | 34.0 | 2.86e-01 | 76.1% | 35.0% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 39.0 | 3.44e-01 | 74.6% | 82.1% |
| 3wa7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 46.0 | 2.82e-01 | 94.0% | 70.0% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.55 | 38.0 | 2.97e-01 | 83.6% | 31.8% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 37.0 | 3.01e-01 | 100.0% | 33.8% |
| 4up7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 39.0 | 3.07e-01 | 77.6% | 49.3% |
| 1ex0B02 | 3.90.260.10 | Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like | 0.53 | 45.0 | 2.93e-01 | 97.0% | 46.2% |
| 4hvmD02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.53 | 46.0 | 3.30e-01 | 98.5% | 81.2% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 42.0 | 3.84e-01 | 91.0% | 78.0% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 37.0 | 3.30e-01 | 80.6% | 82.7% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 41.0 | 2.79e-01 | 88.1% | 90.9% |
| 6zwwC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.86e-01 | 79.1% | 75.1% |
| 7uzsX02 | 3.90.260.10 | Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like | 0.51 | 43.0 | 2.86e-01 | 95.5% | 44.1% |
| 3qjlA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 3.48e-01 | 98.5% | 50.4% |
| 4mtlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 39.0 | 2.88e-01 | 86.6% | 90.4% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 32.0 | 2.62e-01 | 86.6% | 30.0% |
| 1okjB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 43.0 | 3.56e-01 | 100.0% | 52.0% |
| 2qx2A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.51 | 41.0 | 2.74e-01 | 95.5% | 62.9% |
| 3ib5A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.50 | 41.0 | 2.70e-01 | 94.0% | 56.4% |
| 3edyA02 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.50 | 37.0 | 2.44e-01 | 83.6% | 96.7% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030681 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.93 | 63.0 | 6.44e-01 | 70.1% | 72.3% |
| 4028013 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.92 | 65.0 | 6.20e-01 | 73.1% | 65.3% |
| 4028791 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.91 | 63.0 | 6.95e-01 | 73.1% | 87.3% |
| 4029439 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.90 | 65.0 | 6.48e-01 | 74.6% | 72.5% |
| 4027723 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.90 | 66.0 | 6.57e-01 | 76.1% | 74.3% |
| 4026211 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.90 | 63.0 | 7.27e-01 | 74.6% | 98.0% |
| 4026577 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.89 | 62.0 | 6.87e-01 | 73.1% | 89.1% |
| 4027686 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.88 | 62.0 | 6.81e-01 | 73.1% | 90.9% |
| 4025434 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.88 | 59.0 | 5.72e-01 | 73.1% | 62.7% |
| 4024768 | 330.3.1.7 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like › AP2 | 0.87 | 61.0 | 6.73e-01 | 74.6% | 89.1% |
| 4026917 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.87 | 61.0 | 6.96e-01 | 73.1% | 98.0% |
| 4029445 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.85 | 58.0 | 6.35e-01 | 70.1% | 85.5% |
| 4027687 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.85 | 59.0 | 6.51e-01 | 73.1% | 89.1% |
| 4026802 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.75 | 61.0 | 4.93e-01 | 86.6% | 50.8% |
| 4108520 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.66 | 51.0 | 4.11e-01 | 85.1% | 90.4% |
| 3252808 | 1170.1.2.0 ↗ | beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) | 0.65 | 43.0 | 4.28e-01 | 86.6% | 65.7% |
| 4930470 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.63 | 39.0 | 3.64e-01 | 70.1% | 48.2% |
| 5054746 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.60 | 42.0 | 2.87e-01 | 73.1% | 86.0% |
| 5053880 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 32.0 | 3.78e-01 | 83.6% | 73.3% |
| 3175837 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 41.0 | 3.26e-01 | 74.6% | 36.0% |
| 3690527 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 45.0 | 4.03e-01 | 83.6% | 77.9% |
| 1106390 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.58 | 48.0 | 3.45e-01 | 92.5% | 98.1% |
| 4505972 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.58 | 45.0 | 2.86e-01 | 82.1% | 30.0% |
| 3612082 | 330.16.1.3 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain › CEP19 | 0.58 | 50.0 | 4.75e-01 | 100.0% | 88.7% |
| 3720000 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.58 | 50.0 | 4.99e-01 | 100.0% | 95.7% |
| 3427749 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.57 | 37.0 | 3.81e-01 | 80.6% | 69.2% |
| 4934840 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 49.0 | 4.03e-01 | 98.5% | 86.4% |
| 5010744 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 40.0 | 4.06e-01 | 94.0% | 76.9% |
| 3173979 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 43.0 | 2.65e-01 | 86.6% | 24.5% |
| 4857422 | 2002.1.1.173 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GH123_cat | 0.56 | 46.0 | 2.99e-01 | 94.0% | 32.5% |
| 4027469 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.56 | 42.0 | 2.70e-01 | 80.6% | 66.1% |
| 3585833 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 43.0 | 3.72e-01 | 85.1% | 69.1% |
| 4000324 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.55 | 31.0 | 2.98e-01 | 95.5% | 46.7% |
| 4929462 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.55 | 42.0 | 3.46e-01 | 80.6% | 99.1% |
| 3708849 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.55 | 41.0 | 2.83e-01 | 83.6% | 71.0% |
| 5039979 | 604.2.1.1 ↗ | alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succ_DH_flav_C | 0.55 | 41.0 | 3.21e-01 | 79.1% | 63.7% |
| 3167354 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.55 | 36.0 | 3.56e-01 | 100.0% | 63.0% |
| 4171935 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.54 | 39.0 | 2.96e-01 | 76.1% | 81.2% |
| 4176001 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.54 | 36.0 | 2.68e-01 | 73.1% | 28.9% |
| 4983641 | 2484.1.1.49 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N | 0.54 | 46.0 | 3.65e-01 | 100.0% | 78.0% |
| 5035011 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.53 | 47.0 | 3.21e-01 | 98.5% | 29.8% |
| 3593642 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 42.0 | 3.86e-01 | 91.0% | 81.1% |
| 4141828 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.53 | 32.0 | 3.17e-01 | 71.6% | 54.1% |
| 3598125 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 33.0 | 3.20e-01 | 71.6% | 54.7% |
| 4600223 | 616.1.1.33 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › UPF0262 | 0.53 | 43.0 | 3.48e-01 | 95.5% | 68.3% |
| 4168737 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 32.0 | 3.13e-01 | 73.1% | 52.7% |
| 3471380 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.52 | 36.0 | 2.58e-01 | 74.6% | 26.7% |
| 3223614 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 43.0 | 2.94e-01 | 95.5% | 76.0% |
| 3377650 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 42.0 | 2.98e-01 | 97.0% | 84.6% |
| 3696491 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 36.0 | 2.63e-01 | 73.1% | 76.8% |
| 5059219 | 7601.1.1.2 ↗ | a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 | 0.51 | 44.0 | 2.95e-01 | 98.5% | 73.9% |
| 3882038 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.51 | 37.0 | 2.88e-01 | 76.1% | 53.5% |
| 3283375 | 2005.1.1.95 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF28097 | 0.51 | 40.0 | 2.77e-01 | 94.0% | 80.0% |
| 3449579 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 41.0 | 3.07e-01 | 95.5% | 44.2% |
| 3932224 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.50 | 41.0 | 2.74e-01 | 95.5% | 74.5% |
| 3782527 | 4139.1.1.1 ↗ | a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 | 0.50 | 39.0 | 3.77e-01 | 88.1% | 75.0% |
| 3812451 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.50 | 29.0 | 3.35e-01 | 95.5% | 77.8% |