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FFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00192

Bact-Vir

FFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00192

Identity

Kingdom:
phage

Quality

80.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-52
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2icgA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.69 57.0 4.09e-01 94.2% 71.1%
3d5pA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.61 46.0 3.54e-01 86.5% 68.4%
D2 high residues 68-147
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 54.0 6.10e-01 72.5% 96.8%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 50.0 5.38e-01 71.2% 78.3%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 52.0 4.95e-01 70.0% 72.8%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 51.0 5.54e-01 72.5% 84.8%
2akkA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 52.0 5.39e-01 76.2% 100.0%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.72 50.0 4.69e-01 72.5% 60.2%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 49.0 5.20e-01 71.2% 94.4%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.71 48.0 5.17e-01 70.0% 97.0%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.70 53.0 4.02e-01 78.8% 37.9%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.70 47.0 4.34e-01 71.2% 53.9%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 49.0 5.17e-01 73.8% 94.4%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.70 54.0 5.55e-01 82.5% 94.8%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.70 46.0 4.06e-01 73.8% 46.9%
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.70 49.0 4.59e-01 72.5% 84.4%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.67 46.0 5.06e-01 70.0% 100.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 48.0 5.21e-01 75.0% 100.0%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 49.0 5.32e-01 77.5% 100.0%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 47.0 4.81e-01 73.8% 82.1%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 42.0 4.88e-01 72.5% 98.2%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 47.0 4.50e-01 80.0% 86.5%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.96e-01 92.5% 85.5%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 45.0 3.93e-01 77.5% 55.2%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.61 40.0 3.87e-01 73.8% 58.2%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.59 40.0 3.67e-01 71.2% 88.1%
2p1gA02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.59 42.0 3.91e-01 75.0% 72.0%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 43.0 3.88e-01 81.2% 87.0%
3npfA03 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.56 40.0 3.24e-01 76.2% 45.3%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.55 47.0 3.63e-01 98.8% 85.4%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.54 41.0 3.74e-01 80.0% 92.5%
4h63Q04 3.90.1150.120 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.52 36.0 3.23e-01 73.8% 83.6%
2ox7A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.51 39.0 4.13e-01 81.2% 100.0%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4949848 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.80 53.0 6.21e-01 72.5% 98.2%
4286562 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 53.0 5.78e-01 71.2% 95.4%
140210 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 50.0 5.38e-01 71.2% 78.3%
4282868 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.76 52.0 5.51e-01 70.0% 94.3%
3850775 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.75 51.0 5.60e-01 73.8% 86.2%
4335951 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 51.0 5.35e-01 70.0% 90.4%
4212091 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 52.0 5.73e-01 72.5% 95.4%
4284778 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 51.0 5.32e-01 71.2% 90.7%
4660084 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 51.0 5.44e-01 71.2% 89.9%
4958339 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.74 54.0 4.84e-01 76.2% 72.7%
4261362 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 53.0 5.60e-01 73.8% 91.4%
5043132 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.74 54.0 5.31e-01 76.2% 91.8%
3926175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 51.0 5.02e-01 71.2% 70.6%
4432457 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 51.0 5.40e-01 71.2% 88.6%
4252954 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 51.0 5.38e-01 71.2% 90.0%
145285 4.1.1.66 beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.74 51.0 5.50e-01 72.5% 86.4%
5036621 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 49.0 5.80e-01 73.8% 100.0%
4515863 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 53.0 4.72e-01 75.0% 64.5%
4185009 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 51.0 5.60e-01 72.5% 95.4%
4574546 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 50.0 5.44e-01 70.0% 96.9%
4041376 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 50.0 5.08e-01 71.2% 83.7%
4124780 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 50.0 5.27e-01 71.2% 84.9%
3222051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 47.0 5.20e-01 70.0% 81.5%
4084850 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 49.0 5.37e-01 70.0% 92.3%
4158712 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 53.0 5.66e-01 76.2% 94.3%
3587337 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.73 49.0 3.97e-01 70.0% 40.0%
4104821 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 51.0 5.30e-01 73.8% 86.7%
4342110 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 50.0 5.20e-01 71.2% 83.6%
4505797 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 50.0 5.42e-01 71.2% 95.4%
4226934 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 49.0 5.36e-01 70.0% 92.3%
5080336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 49.0 5.38e-01 70.0% 93.8%
4476045 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 50.0 5.35e-01 72.5% 90.0%
3037102 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 47.0 5.19e-01 70.0% 85.5%
4205717 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 51.0 5.12e-01 73.8% 81.2%
5046193 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.72 50.0 4.82e-01 72.5% 65.6%
3833030 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.71 52.0 4.35e-01 76.2% 51.1%
4668815 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.71 50.0 4.73e-01 72.5% 64.2%
3554026 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.71 48.0 5.43e-01 70.0% 100.0%
4088209 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 49.0 5.32e-01 71.2% 95.4%
4226849 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 52.0 5.22e-01 76.2% 86.3%
5005903 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.71 50.0 4.62e-01 72.5% 60.0%
4299932 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 49.0 5.30e-01 71.2% 95.4%
4253108 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.71 49.0 4.82e-01 72.5% 67.0%
4302032 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 49.0 5.28e-01 71.2% 95.4%
4885908 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.70 51.0 4.79e-01 76.2% 63.3%
3927363 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 44.0 5.25e-01 75.0% 100.0%
4270910 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 52.0 5.51e-01 77.5% 94.3%
4069793 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 49.0 5.17e-01 72.5% 90.0%
4264671 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 52.0 5.25e-01 78.8% 87.5%
3712782 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 47.0 4.79e-01 70.0% 72.5%
4157193 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 51.0 5.43e-01 77.5% 90.0%
3372243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 49.0 4.90e-01 72.5% 78.8%
3541996 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.70 48.0 3.60e-01 71.2% 32.6%
4118226 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 48.0 5.14e-01 72.5% 90.0%
4554867 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 51.0 5.56e-01 77.5% 96.9%
4429329 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 47.0 5.13e-01 71.2% 93.8%
4216845 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 49.0 5.14e-01 75.0% 86.3%
3393319 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 50.0 4.49e-01 76.2% 56.4%
1263519 4.1.1.96 beta barrels › SH3 › SH3 › SH3 › Hfq 0.69 47.0 5.22e-01 71.2% 95.2%
3235628 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.68 48.0 4.09e-01 72.5% 46.2%
5038340 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 49.0 5.05e-01 75.0% 88.0%
3368254 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.68 45.0 5.23e-01 71.2% 100.0%
4527355 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 51.0 5.40e-01 78.8% 92.8%
3638174 4.1.1.320 beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.68 50.0 4.72e-01 78.8% 65.3%
3729666 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 49.0 4.41e-01 76.2% 69.1%
3727542 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 50.0 4.84e-01 78.8% 75.6%
4093911 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 50.0 5.14e-01 78.8% 90.7%
3721973 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 47.0 4.83e-01 72.5% 88.0%
3721116 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 47.0 4.68e-01 75.0% 74.1%
3342430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 48.0 4.96e-01 77.5% 89.3%
4017956 109.1.1.35 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › PF25907 0.66 48.0 3.28e-01 76.2% 24.7%
3696482 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.74e-01 78.8% 75.3%
3390230 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.65 50.0 4.14e-01 83.7% 78.6%
3818428 4.1.1.66 beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.65 47.0 4.82e-01 76.2% 84.0%
3824346 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.63e-01 75.0% 78.8%
3423337 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.64 46.0 4.60e-01 75.0% 77.5%
4025002 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.62 51.0 4.41e-01 91.3% 80.8%
3938291 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.62 50.0 4.22e-01 88.7% 78.5%
3339169 4.1.1.415 beta barrels › SH3 › SH3 › SH3 › PNPOx_N 0.59 40.0 4.00e-01 71.2% 85.9%
3625177 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.58 49.0 4.12e-01 92.5% 74.8%
3574613 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.58 38.0 3.55e-01 80.0% 54.0%
3679910 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 36.0 2.72e-01 80.0% 27.6%