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FFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00201
Bact-VirFFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00201
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-93
Domain cluster:
rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.93 | 80.0 | 8.45e-01 | 97.6% | 100.0% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 55.0 | 6.24e-01 | 84.7% | 87.7% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 53.0 | 5.83e-01 | 87.1% | 83.8% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 43.0 | 5.53e-01 | 82.4% | 91.8% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 51.0 | 5.54e-01 | 83.5% | 78.9% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 54.0 | 5.97e-01 | 87.1% | 88.2% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 51.0 | 5.46e-01 | 88.2% | 77.0% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 53.0 | 5.69e-01 | 85.9% | 82.2% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 61.0 | 5.22e-01 | 91.8% | 54.6% |
| 4m78N00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 50.0 | 5.39e-01 | 87.1% | 78.9% |
| 4c92F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 56.0 | 5.88e-01 | 88.2% | 84.4% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 51.0 | 5.96e-01 | 83.5% | 98.3% |
| 3jb9H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 52.0 | 5.50e-01 | 84.7% | 80.3% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 50.0 | 5.48e-01 | 85.9% | 84.5% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 52.0 | 5.49e-01 | 85.9% | 82.1% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 50.0 | 5.08e-01 | 87.1% | 74.4% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 51.0 | 4.74e-01 | 87.1% | 60.0% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 48.0 | 4.58e-01 | 87.1% | 61.0% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 51.0 | 5.32e-01 | 84.7% | 83.5% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 44.0 | 5.18e-01 | 88.2% | 96.6% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 39.0 | 4.40e-01 | 84.7% | 79.4% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 41.0 | 4.57e-01 | 88.2% | 83.1% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 51.0 | 5.19e-01 | 95.3% | 90.1% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 47.0 | 4.88e-01 | 85.9% | 87.5% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 51.0 | 4.92e-01 | 100.0% | 92.7% |
| 5z8lA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.56 | 49.0 | 4.45e-01 | 100.0% | 89.1% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 4.12e-01 | 84.7% | 84.7% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 39.0 | 4.36e-01 | 82.4% | 95.5% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 35.0 | 3.20e-01 | 84.7% | 47.4% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 47.0 | 3.98e-01 | 100.0% | 74.3% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.76e-01 | 95.3% | 74.7% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 35.0 | 3.89e-01 | 88.2% | 95.2% |
| 2kgtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 36.0 | 3.84e-01 | 87.1% | 86.1% |
| 5nslA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 38.0 | 2.51e-01 | 80.0% | 38.1% |
| 4pz7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 37.0 | 3.20e-01 | 76.5% | 52.6% |
| 3vx8A02 | 3.40.140.70 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain | 0.51 | 35.0 | 2.88e-01 | 70.6% | 82.3% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 41.0 | 2.88e-01 | 90.6% | 87.0% |
| 4hfsA00 | 2.60.120.1270 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 40.0 | 3.11e-01 | 88.2% | 57.1% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 38.0 | 3.96e-01 | 90.6% | 90.8% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932286 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.83 | 57.0 | 6.17e-01 | 87.1% | 83.6% |
| 4559371 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 50.0 | 5.71e-01 | 90.6% | 85.7% |
| 4016022 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 55.0 | 5.85e-01 | 88.2% | 81.3% |
| 4948069 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 58.0 | 6.13e-01 | 92.9% | 88.0% |
| 409205 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.77 | 60.0 | 6.02e-01 | 100.0% | 82.4% |
| 4993070 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 61.0 | 6.49e-01 | 90.6% | 96.0% |
| 3712122 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.75 | 52.0 | 5.26e-01 | 88.2% | 71.8% |
| 3224038 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.75 | 53.0 | 5.68e-01 | 84.7% | 84.0% |
| 3987498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 53.0 | 5.38e-01 | 100.0% | 74.1% |
| 3598832 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 51.0 | 5.71e-01 | 85.9% | 92.3% |
| 4485354 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.74 | 51.0 | 4.95e-01 | 85.9% | 63.8% |
| 4104821 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.74 | 46.0 | 4.89e-01 | 91.8% | 72.0% |
| 4024322 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 52.0 | 5.51e-01 | 85.9% | 84.0% |
| 3995481 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.72 | 52.0 | 4.88e-01 | 87.1% | 63.0% |
| 3712189 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 56.0 | 5.49e-01 | 91.8% | 77.8% |
| 3786067 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 53.0 | 5.45e-01 | 87.1% | 83.7% |
| 4140958 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 48.0 | 5.05e-01 | 91.8% | 80.0% |
| 3328647 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.70 | 46.0 | 4.68e-01 | 91.8% | 68.2% |
| 3168781 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 54.0 | 4.98e-01 | 88.2% | 65.7% |
| 3598052 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 55.0 | 5.40e-01 | 94.1% | 80.0% |
| 3167103 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.68 | 54.0 | 5.13e-01 | 87.1% | 72.0% |
| 3170398 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.68 | 53.0 | 4.97e-01 | 85.9% | 67.6% |
| 3665119 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.68 | 50.0 | 5.21e-01 | 83.5% | 82.5% |
| 3482844 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 55.0 | 5.54e-01 | 95.3% | 87.1% |
| 3341533 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.67 | 54.0 | 5.23e-01 | 87.1% | 76.8% |
| 4225787 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 47.0 | 4.47e-01 | 90.6% | 62.0% |
| 3699736 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 52.0 | 5.04e-01 | 84.7% | 78.7% |
| 3176686 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.67 | 57.0 | 5.74e-01 | 97.6% | 91.8% |
| 3593948 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 54.0 | 5.43e-01 | 87.1% | 85.9% |
| 3730294 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 50.0 | 5.22e-01 | 87.1% | 85.0% |
| 4013487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 52.0 | 4.71e-01 | 83.5% | 63.6% |
| 3618922 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 52.0 | 5.03e-01 | 90.6% | 77.9% |
| 3788817 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 52.0 | 5.22e-01 | 84.7% | 84.7% |
| 3455165 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 52.0 | 5.05e-01 | 87.1% | 77.9% |
| 3509763 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 53.0 | 4.37e-01 | 89.4% | 67.3% |
| 4019995 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 52.0 | 4.76e-01 | 87.1% | 76.4% |
| 3702167 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 54.0 | 4.86e-01 | 91.8% | 71.3% |
| 3555586 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 52.0 | 5.04e-01 | 87.1% | 77.9% |
| 3250542 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.62 | 49.0 | 4.63e-01 | 83.5% | 78.0% |
| 4017204 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.60 | 53.0 | 5.06e-01 | 95.3% | 85.0% |
| 3616622 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 4.63e-01 | 85.9% | 96.8% |
| 3233461 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 40.0 | 4.51e-01 | 82.4% | 96.7% |
| 4397252 | 3523.1.1.3 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptC | 0.59 | 40.0 | 3.46e-01 | 77.6% | 43.7% |
| 3928711 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 46.0 | 4.66e-01 | 100.0% | 90.6% |
| 224086 | 9.18.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.55 | 47.0 | 3.98e-01 | 100.0% | 74.3% |
| 4954455 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 43.0 | 3.94e-01 | 90.6% | 81.7% |
| 4614224 | 2.1.1.60 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N | 0.53 | 26.0 | 3.19e-01 | 94.1% | 74.0% |
| 3272021 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.53 | 42.0 | 3.37e-01 | 87.1% | 69.1% |
| 3243118 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.53 | 41.0 | 3.28e-01 | 84.7% | 48.6% |
| 3744332 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.52 | 41.0 | 3.29e-01 | 87.1% | 65.6% |
| 3926060 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.52 | 44.0 | 3.58e-01 | 90.6% | 56.1% |
| 2464332 | 3523.1.1.1 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG | 0.51 | 39.0 | 3.82e-01 | 83.5% | 89.6% |
| 3788062 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.51 | 33.0 | 3.36e-01 | 74.1% | 66.7% |