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FFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00270
Bact-VirFFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00270
Identity
- Kingdom:
- phage
Quality
90.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-104
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jnrB02 | 6.20.260.10 | Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain | 0.69 | 29.0 | 3.16e-01 | 100.0% | 45.8% |
| 1odhA01 | 2.20.25.670 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain | 0.61 | 34.0 | 3.90e-01 | 73.0% | 74.6% |
| 2p0wA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 49.0 | 4.44e-01 | 88.0% | 69.2% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.60 | 43.0 | 3.83e-01 | 75.0% | 99.3% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 31.0 | 3.28e-01 | 88.0% | 55.1% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 32.0 | 3.92e-01 | 85.0% | 89.7% |
| 2x5gA00 | 3.30.720.60 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.58 | 47.0 | 4.88e-01 | 86.0% | 96.7% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 45.0 | 3.91e-01 | 89.0% | 84.6% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 44.0 | 4.04e-01 | 87.0% | 84.3% |
| 1dpgA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 42.0 | 2.97e-01 | 82.0% | 66.0% |
| 1ikpA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 39.0 | 3.09e-01 | 79.0% | 69.5% |
| 1bqgA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 39.0 | 3.52e-01 | 90.0% | 57.2% |
| 3n40P02 | 2.60.40.3200 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain | 0.52 | 41.0 | 3.22e-01 | 85.0% | 79.7% |
| 3g5kA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.51 | 40.0 | 3.31e-01 | 83.0% | 85.2% |
| 5iroD00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 4.07e-01 | 96.0% | 84.3% |
| 2pofA00 | 3.30.428.30 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT family - CDH-like | 0.50 | 35.0 | 2.77e-01 | 86.0% | 32.7% |
| 5vawA01 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.50 | 40.0 | 3.86e-01 | 88.0% | 82.8% |
| 1xdiA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 40.0 | 3.07e-01 | 84.0% | 97.7% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3260066 | 1129.1.1.1 ↗ | a+b three layers › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit › NDUFA12 | 0.64 | 35.0 | 3.59e-01 | 70.0% | 54.0% |
| 3574409 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.59 | 42.0 | 4.36e-01 | 94.0% | 81.1% |
| 3959531 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 28.0 | 3.25e-01 | 79.0% | 61.4% |
| 396038 | 4221.1.1.2 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › PHA01746 | 0.58 | 47.0 | 4.88e-01 | 86.0% | 96.7% |
| 4378664 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 43.0 | 3.28e-01 | 81.0% | 87.7% |
| 4502878 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.58 | 32.0 | 3.87e-01 | 86.0% | 88.3% |
| 4038195 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.57 | 41.0 | 4.42e-01 | 75.0% | 95.3% |
| 3788662 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 38.0 | 4.22e-01 | 85.0% | 85.0% |
| 3924597 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.57 | 38.0 | 4.30e-01 | 90.0% | 95.7% |
| 4037619 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.57 | 41.0 | 4.43e-01 | 76.0% | 95.3% |
| 3288021 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.57 | 40.0 | 3.35e-01 | 74.0% | 41.7% |
| 3607721 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.56 | 46.0 | 3.76e-01 | 91.0% | 71.6% |
| 3761723 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.53 | 43.0 | 3.50e-01 | 90.0% | 51.5% |
| 4882977 | 10.1.1.29 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Exotox-A_bind | 0.53 | 42.0 | 3.08e-01 | 85.0% | 74.5% |
| 3255320 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.53 | 42.0 | 3.45e-01 | 86.0% | 47.6% |
| 3536886 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.53 | 43.0 | 3.34e-01 | 90.0% | 43.0% |
| 3834895 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.52 | 43.0 | 3.39e-01 | 90.0% | 52.1% |
| 3839768 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 36.0 | 2.50e-01 | 72.0% | 44.6% |
| 4429412 | 274.1.1.1 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › Pilin | 0.52 | 40.0 | 3.69e-01 | 83.0% | 94.6% |
| 4028996 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 35.0 | 3.20e-01 | 100.0% | 48.3% |
| 5015845 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.52 | 37.0 | 3.15e-01 | 74.0% | 60.0% |
| 5001279 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.51 | 39.0 | 2.64e-01 | 79.0% | 48.9% |
| 5053329 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 41.0 | 3.87e-01 | 86.0% | 80.0% |
| 4999507 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.51 | 30.0 | 3.45e-01 | 82.0% | 81.4% |
| 4931190 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.51 | 36.0 | 2.84e-01 | 74.0% | 47.6% |
| 4185890 | 274.1.1.1 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › Pilin | 0.50 | 38.0 | 3.58e-01 | 83.0% | 95.3% |