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FJ184280.1__ACI32407.1__X__00072
Bact-VirFJ184280.1__ACI32407.1__X__00072
Identity
- Accession:
- FJ184280 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Taxonomy
TaxID: 564886
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 69-156
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06416.19 best | T3SS_NleG | 137.5 | 2.40e-40 | 100.0% | 77.9% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kkxA00 | 3.30.40.80 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Effector protein NleG | 0.90 | 84.0 | 7.98e-01 | 100.0% | 86.3% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.77 | 51.0 | 5.37e-01 | 72.7% | 75.0% |
| 2lxhC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.75 | 49.0 | 5.81e-01 | 77.3% | 100.0% |
| 5dinA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.73 | 49.0 | 4.40e-01 | 76.1% | 50.0% |
| 4wz2C00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.73 | 48.0 | 5.16e-01 | 73.9% | 79.7% |
| 3ztgA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.72 | 50.0 | 4.96e-01 | 73.9% | 68.5% |
| 2y43A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.72 | 49.0 | 4.94e-01 | 75.0% | 69.3% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.71 | 47.0 | 5.15e-01 | 75.0% | 85.5% |
| 1rmdA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.70 | 50.0 | 5.08e-01 | 76.1% | 75.6% |
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.70 | 51.0 | 4.77e-01 | 77.3% | 67.9% |
| 1wgmA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 46.0 | 4.97e-01 | 81.8% | 83.6% |
| 2fd4A00 | 3.30.40.110 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain | 0.68 | 54.0 | 5.08e-01 | 85.2% | 88.6% |
| 2ma6A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 43.0 | 4.92e-01 | 73.9% | 93.4% |
| 3hctA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 48.0 | 4.57e-01 | 86.4% | 66.3% |
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.52 | 35.0 | 3.08e-01 | 70.5% | 71.8% |
| 1ybiA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 44.0 | 3.78e-01 | 100.0% | 83.2% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2327296 | 376.1.1.10 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › T3SS_NleG | 0.97 | 94.0 | 8.55e-01 | 100.0% | 80.0% |
| 3577683 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.81 | 51.0 | 5.54e-01 | 70.5% | 74.7% |
| 4025085 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.81 | 50.0 | 5.57e-01 | 71.6% | 78.6% |
| 3902772 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.80 | 50.0 | 5.58e-01 | 71.6% | 80.0% |
| 3196677 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.79 | 52.0 | 5.96e-01 | 75.0% | 92.3% |
| 3655044 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.77 | 49.0 | 5.80e-01 | 72.7% | 95.0% |
| 3250122 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.77 | 56.0 | 5.39e-01 | 76.1% | 68.0% |
| 3596219 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.77 | 51.0 | 5.17e-01 | 73.9% | 68.2% |
| 3691750 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.77 | 51.0 | 4.19e-01 | 73.9% | 39.6% |
| 3264295 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.77 | 52.0 | 5.78e-01 | 76.1% | 88.6% |
| 3844071 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.76 | 51.0 | 5.48e-01 | 75.0% | 81.3% |
| 3886602 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.75 | 50.0 | 4.37e-01 | 75.0% | 46.2% |
| 3848188 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.75 | 50.0 | 4.43e-01 | 76.1% | 48.0% |
| 4944275 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.75 | 51.0 | 5.66e-01 | 80.7% | 88.6% |
| 3256523 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.75 | 47.0 | 5.06e-01 | 70.5% | 74.7% |
| 3473204 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.74 | 50.0 | 5.65e-01 | 75.0% | 93.8% |
| 3481026 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.74 | 49.0 | 4.95e-01 | 75.0% | 66.7% |
| 4024500 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.74 | 53.0 | 5.12e-01 | 83.0% | 66.0% |
| 4013209 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.74 | 49.0 | 4.73e-01 | 76.1% | 60.0% |
| 3324521 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.74 | 48.0 | 5.43e-01 | 77.3% | 89.2% |
| 3431652 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.74 | 48.0 | 4.85e-01 | 73.9% | 65.6% |
| 3882753 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.73 | 51.0 | 4.43e-01 | 84.1% | 47.4% |
| 3651050 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.73 | 48.0 | 4.81e-01 | 75.0% | 65.6% |
| 3594777 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.73 | 53.0 | 5.20e-01 | 76.1% | 80.0% |
| 3817884 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.73 | 47.0 | 5.41e-01 | 77.3% | 92.1% |
| 4996272 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.73 | 49.0 | 5.70e-01 | 70.5% | 100.0% |
| 3249325 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.72 | 48.0 | 4.57e-01 | 75.0% | 57.1% |
| 3765926 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.72 | 50.0 | 4.42e-01 | 80.7% | 50.4% |
| 3821195 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.72 | 48.0 | 4.72e-01 | 75.0% | 63.2% |
| 3557730 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.72 | 49.0 | 4.46e-01 | 75.0% | 53.0% |
| 3687508 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.72 | 47.0 | 4.20e-01 | 75.0% | 47.2% |
| 3573352 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.71 | 49.0 | 5.45e-01 | 81.8% | 90.0% |
| 3276478 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.71 | 47.0 | 4.83e-01 | 75.0% | 70.6% |
| 3729830 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.70 | 49.0 | 5.20e-01 | 81.8% | 84.0% |
| 4012910 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 46.0 | 4.65e-01 | 80.7% | 65.6% |
| 4027994 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.70 | 46.0 | 5.21e-01 | 73.9% | 90.8% |
| 3430514 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.70 | 49.0 | 4.97e-01 | 77.3% | 74.1% |
| 1489496 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.70 | 51.0 | 4.89e-01 | 76.1% | 70.3% |
| 3499932 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 50.0 | 5.39e-01 | 83.0% | 88.0% |
| 3622838 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 48.0 | 4.74e-01 | 73.9% | 66.3% |
| 4946420 | 376.1.1.180 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ResIII | 0.70 | 49.0 | 5.62e-01 | 77.3% | 100.0% |
| 3621780 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.70 | 48.0 | 5.04e-01 | 81.8% | 78.8% |
| 3494512 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.70 | 49.0 | 5.24e-01 | 81.8% | 85.3% |
| 3449606 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.69 | 52.0 | 5.03e-01 | 79.5% | 88.0% |
| 3919172 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 54.0 | 5.41e-01 | 83.0% | 84.4% |
| 3392386 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.69 | 48.0 | 5.47e-01 | 83.0% | 98.5% |
| 3260323 | 376.1.1.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-MIZ | 0.69 | 50.0 | 5.33e-01 | 83.0% | 89.3% |
| 4946824 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 51.0 | 3.80e-01 | 78.4% | 36.4% |
| 3936791 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 47.0 | 4.79e-01 | 71.6% | 72.9% |
| 3907135 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.69 | 47.0 | 4.96e-01 | 75.0% | 78.8% |
| 3396437 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.69 | 52.0 | 5.42e-01 | 86.4% | 87.5% |
| 3490882 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.68 | 49.0 | 4.60e-01 | 83.0% | 60.9% |
| 4975593 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 54.0 | 5.53e-01 | 85.2% | 95.3% |
| 3492481 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.67 | 50.0 | 4.67e-01 | 84.1% | 62.7% |
| 3550923 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.67 | 51.0 | 4.38e-01 | 85.2% | 51.9% |
| 3250827 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.66 | 49.0 | 5.24e-01 | 85.2% | 90.7% |
| 4011007 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.66 | 50.0 | 4.64e-01 | 86.4% | 63.6% |
| 3913667 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.66 | 49.0 | 4.31e-01 | 84.1% | 53.1% |
| 3263344 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.66 | 50.0 | 4.54e-01 | 84.1% | 60.9% |
| 3266881 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 53.0 | 5.39e-01 | 85.2% | 94.1% |
| 3601630 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 45.0 | 3.04e-01 | 70.5% | 23.0% |
| 3931770 | 376.1.1.14 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › UPF1_Zn_bind | 0.65 | 45.0 | 4.81e-01 | 77.3% | 84.0% |
| 4462955 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.65 | 46.0 | 4.91e-01 | 78.4% | 86.7% |
| 3782443 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 47.0 | 3.79e-01 | 85.2% | 40.6% |
| 3390300 | 375.1.1.187 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zf_2nd_IFT121 | 0.64 | 50.0 | 5.14e-01 | 85.2% | 98.8% |
| 3895601 | 376.1.1.78 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zf_2nd_IFT121 | 0.64 | 52.0 | 5.13e-01 | 90.9% | 95.8% |
| 3601822 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 52.0 | 5.23e-01 | 92.0% | 96.7% |
| None | — | 0.63 | 52.0 | 5.08e-01 | 90.9% | 95.8% | |
| 3720672 | 109.4.1.1591 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U-box | 0.62 | 50.0 | 3.49e-01 | 86.4% | 58.2% |
| 3227922 | 109.4.1.1159 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IFT122 | 0.62 | 44.0 | 2.83e-01 | 75.0% | 23.7% |
| 3533136 | 376.1.1.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-MIZ | 0.59 | 51.0 | 4.29e-01 | 95.5% | 84.0% |
| 3714165 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.59 | 52.0 | 4.01e-01 | 98.9% | 44.2% |
| 3594796 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 49.0 | 4.31e-01 | 95.5% | 90.4% |
| 3369778 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.56 | 43.0 | 3.47e-01 | 85.2% | 47.8% |
| 4929510 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 31.0 | 3.72e-01 | 80.7% | 100.0% |
| 4494566 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.52 | 42.0 | 3.64e-01 | 90.9% | 75.2% |
| 3200375 | 101.1.2.569 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28722 | 0.50 | 37.0 | 2.60e-01 | 77.3% | 35.3% |
D2
medium
residues 5-66
Domain cluster:
representative