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FJ236310.1__ACO83191.1__X__00028

Bact-Vir

FJ236310.1__ACO83191.1__X__00028

Identity

Accession:
FJ236310 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aliceevansviridae› Moineauvirus› Streptococcus_phage_Abc2

TaxID: 2919544

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-54
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 58.0 4.82e-01 100.0% 59.6%
3llcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 54.0 3.50e-01 98.0% 82.4%
3kzgA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 47.0 3.51e-01 82.4% 82.9%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.60 44.0 2.70e-01 84.3% 71.2%
5undA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.59 31.0 3.05e-01 94.1% 44.4%
2mdgA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.59 29.0 2.87e-01 92.2% 41.8%
1nktA02 3.90.1440.10 Alpha Beta › Alpha-Beta Complex › Pre-protein croslinking domain of SecA › SecA, preprotein cross-linking domain 0.58 42.0 3.35e-01 80.4% 33.6%
4ijdA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 31.0 3.81e-01 96.1% 80.6%
8d3mA02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.56 45.0 3.03e-01 100.0% 39.6%
3cexA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.55 46.0 3.31e-01 98.0% 90.0%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.84e-01 86.3% 76.4%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 44.0 4.00e-01 92.2% 65.3%
2ctdA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.54 32.0 2.66e-01 100.0% 28.1%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.65e-01 90.2% 77.6%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.66e-01 96.1% 55.1%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.04e-01 90.2% 37.7%
1yuiA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.52 30.0 2.95e-01 98.0% 48.1%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 44.0 3.28e-01 100.0% 68.6%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 35.0 2.27e-01 72.5% 20.4%
4f03A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 43.0 3.48e-01 100.0% 72.4%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.51 39.0 3.32e-01 96.1% 48.4%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.50 38.0 2.94e-01 100.0% 92.0%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5027627 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.75 64.0 6.29e-01 100.0% 90.9%
3980161 101.1.9.45 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA 0.73 57.0 5.62e-01 90.2% 81.8%
3952885 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.72 57.0 5.80e-01 94.1% 92.0%
4031520 101.1.9.64 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_23 0.70 60.0 5.63e-01 100.0% 86.2%
3596092 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.65 53.0 4.57e-01 98.0% 56.7%
3775644 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.57 32.0 2.70e-01 74.5% 30.6%
3491614 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.56 46.0 4.09e-01 98.0% 78.8%
3484387 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.55 31.0 3.20e-01 98.0% 56.0%
3800233 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.55 37.0 3.67e-01 70.6% 81.8%
3348850 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.55e-01 82.4% 80.0%
3652603 101.1.2.516 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25895 0.54 43.0 3.51e-01 96.1% 47.3%
4015831 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.54 43.0 4.24e-01 98.0% 93.1%
3941508 148.1.3.57 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF5375 0.53 42.0 3.64e-01 96.1% 81.1%
3302118 327.16.1.16 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Myb_DNA-bind_3 0.52 37.0 3.45e-01 82.4% 57.1%
None — 0.52 40.0 2.32e-01 90.2% 54.5%
3503111 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.19e-01 84.3% 49.5%
5049200 7573.1.1.13 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › PRTase-CE 0.51 38.0 2.32e-01 84.3% 25.3%
4107841 101.1.2.46 ↗ alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg 0.51 39.0 3.40e-01 92.2% 55.6%