←Back to structures

FJ373894.1__ACO94359.1__X__00125

Bact-Vir

FJ373894.1__ACO94359.1__X__00125

Identity

Accession:
FJ373894 ↗
Kingdom:
phage

Quality

95.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Agtrevirus› Shigella_phage_Ag3

TaxID: 637730

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-93
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bxjA02 1.10.506.20 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › 0.61 50.0 4.58e-01 93.2% 100.0%
1dkxA02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.59 40.0 3.89e-01 100.0% 62.5%
5jajA03 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.58 49.0 4.23e-01 97.3% 59.5%
8agyA01 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.58 47.0 3.36e-01 91.8% 73.4%
2fzlA02 6.10.140.1180 Special › Helix non-globular › Helix Hairpins › 0.56 42.0 4.45e-01 95.9% 100.0%
2dofA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.56 38.0 3.69e-01 71.2% 75.3%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.56 31.0 3.11e-01 100.0% 52.0%
3k53A02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 46.0 4.28e-01 97.3% 78.6%
5n17A01 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.55 47.0 4.27e-01 100.0% 97.1%
1zp2A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 41.0 3.58e-01 82.2% 67.8%
2kr6A01 1.10.472.100 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Presenilin 0.54 42.0 3.76e-01 84.9% 60.4%
7qocA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 45.0 3.44e-01 98.6% 56.7%
2y1vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.05e-01 100.0% 33.0%
3tacB03 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.52 42.0 4.02e-01 90.4% 98.8%
4xaaA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 45.0 3.24e-01 100.0% 33.0%
2lqlA02 1.10.287.2900 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 32.0 3.56e-01 100.0% 100.0%
4lqkA00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.51 42.0 3.62e-01 97.3% 65.2%
1ac1A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 38.0 2.86e-01 79.5% 52.1%
3c7mA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 37.0 2.84e-01 80.8% 55.9%
2h21A02 3.90.1420.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain 0.51 38.0 2.93e-01 79.5% 90.9%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4021017 3266.1.1.1 ↗ alpha arrays › Rap1 C-terminal domain › Rap1 C-terminal domain › Rap1 C-terminal domain › Rap1_C 0.65 43.0 4.48e-01 97.3% 75.4%
3892891 192.17.1.0 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like 0.64 39.0 3.82e-01 91.8% 56.2%
5039478 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.64 52.0 3.32e-01 97.3% 17.6%
4194678 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.61 41.0 4.03e-01 100.0% 63.7%
4300173 633.13.1.1 ↗ alpha bundles › Bromodomain-like › DsbB-like › DsbB-like › DsbB 0.58 50.0 4.09e-01 98.6% 100.0%
3815231 138.1.1.0 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.58 50.0 4.16e-01 100.0% 99.3%
3946717 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.53 31.0 3.18e-01 100.0% 60.0%
4064871 1079.1.1.8 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › LysE 0.53 44.0 3.28e-01 95.9% 72.7%
3673267 592.1.1.0 ↗ alpha arrays › PWI domain-like › PWI domain › PWI domain 0.52 44.0 4.49e-01 100.0% 100.0%
4403721 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.52 46.0 2.75e-01 100.0% 27.2%
3623406 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.51 35.0 3.25e-01 71.2% 65.3%
3957475 191.1.1.22 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_21 0.51 35.0 3.13e-01 74.0% 72.2%
4964445 4049.1.1.0 ↗ alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like 0.50 32.0 3.43e-01 90.4% 78.3%