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FJ449752.1__ACM16062.1__X__00003

Bact-Vir

FJ449752.1__ACM16062.1__X__00003

Identity

Accession:
FJ449752 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Taxonomy

Loebvirae› Hofneiviricota› Faserviricetes› Tubulavirales› Inoviridae› Affertcholeramvirus› Affertcholeramvirus_CTXphi

TaxID: 141904

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-36_93-155
PDB
Domain cluster: rep: NC_015297.1__YP_004327588.1__RaPhPE226_gp9__00009__D74-176
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5amhA00 2.170.150.20 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. 0.67 54.0 4.87e-01 94.7% 63.2%
1usyC00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.66 50.0 3.43e-01 81.6% 66.1%
3shpA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 49.0 3.86e-01 82.9% 72.5%
6hmjA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 44.0 4.00e-01 78.9% 98.1%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.59 45.0 3.53e-01 82.9% 55.9%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.59 53.0 4.33e-01 100.0% 63.1%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.59 52.0 4.54e-01 100.0% 71.6%
1rvjH02 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.59 45.0 3.77e-01 82.9% 76.5%
4k22A02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.59 43.0 3.87e-01 100.0% 55.6%
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.58 44.0 3.38e-01 81.6% 88.5%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.58 46.0 3.49e-01 86.8% 72.7%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.58 49.0 4.36e-01 93.4% 71.3%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.58 40.0 2.91e-01 73.7% 71.1%
3ctkA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.58 43.0 3.37e-01 82.9% 36.5%
1sqhA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 45.0 3.86e-01 88.2% 97.7%
2yzyA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.57 45.0 3.57e-01 86.8% 74.2%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.57 44.0 3.10e-01 82.9% 82.5%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 50.0 4.09e-01 100.0% 90.3%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 49.0 4.16e-01 100.0% 86.4%
2m47A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 49.0 3.92e-01 100.0% 82.2%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 47.0 3.84e-01 100.0% 83.9%
1lp8A01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.56 41.0 3.17e-01 82.9% 33.1%
4mbrA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 49.0 3.96e-01 98.7% 60.7%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 3.70e-01 88.2% 69.9%
5ywwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 40.0 3.11e-01 77.6% 45.5%
3au0A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 49.0 3.93e-01 100.0% 64.4%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 41.0 2.75e-01 81.6% 85.9%
2ky6A00 2.40.290.30 Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › Mediator complex subunit 25, ACID domain 0.55 40.0 3.15e-01 77.6% 82.5%
2pofA00 3.30.428.30 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT family - CDH-like 0.54 38.0 2.85e-01 76.3% 55.9%
3girA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.53 45.0 4.37e-01 98.7% 98.8%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 37.0 3.30e-01 72.4% 52.3%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 42.0 3.20e-01 86.8% 78.1%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.53 41.0 3.20e-01 89.5% 74.9%
3gniB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 36.0 3.50e-01 94.7% 61.8%
3irpX01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 47.0 3.73e-01 100.0% 59.9%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.53 46.0 4.33e-01 100.0% 93.8%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 37.0 2.74e-01 77.6% 36.4%
1r17B01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 45.0 3.60e-01 100.0% 57.4%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.51 43.0 4.12e-01 97.4% 98.9%
2ej9A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 46.0 3.45e-01 100.0% 59.6%
1f89A00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.51 38.0 2.69e-01 82.9% 59.4%
2y3mB01 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 37.0 3.73e-01 100.0% 76.6%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.51 37.0 3.18e-01 81.6% 62.3%
4je0B01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 44.0 3.59e-01 100.0% 62.5%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964191 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.84 79.0 6.73e-01 100.0% 86.1%
2522075 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.69 56.0 4.96e-01 98.7% 60.7%
3998091 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.69 54.0 5.76e-01 89.5% 100.0%
3972141 881.1.1.25 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 0.66 51.0 4.07e-01 84.2% 61.3%
3230428 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.66 56.0 4.66e-01 93.4% 70.0%
3214909 708.1.2.3 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 0.66 54.0 4.79e-01 94.7% 62.7%
3973908 881.1.1.25 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 0.65 51.0 4.04e-01 84.2% 61.3%
5013461 314.1.1.9 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.65 53.0 3.72e-01 92.1% 65.0%
3290096 244.2.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 0.65 48.0 4.87e-01 100.0% 80.0%
3926920 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.64 53.0 4.68e-01 94.7% 60.9%
4056328 314.1.1.9 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.64 53.0 3.52e-01 92.1% 60.3%
5075303 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.64 55.0 3.93e-01 97.4% 79.6%
4398790 708.1.2.3 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 0.64 53.0 4.55e-01 94.7% 57.3%
3980088 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.64 55.0 4.93e-01 97.4% 83.3%
3329674 708.1.2.12 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › At4g08330 0.63 54.0 4.64e-01 93.4% 67.5%
4988847 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 45.0 4.52e-01 73.7% 88.0%
3267039 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.63 48.0 3.64e-01 82.9% 76.2%
3213025 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.62 49.0 3.69e-01 86.8% 84.7%
3487487 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.62 55.0 4.09e-01 100.0% 89.5%
3056895 71.1.1.7 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 0.61 47.0 3.52e-01 82.9% 73.7%
5006751 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.61 44.0 3.34e-01 76.3% 77.4%
3830571 844.1.1.5 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › DUF3527 0.61 52.0 3.75e-01 93.4% 91.4%
4278307 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.61 47.0 3.49e-01 82.9% 69.5%
3789092 60.1.1.3 ↗ beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Sld7_N 0.60 41.0 3.41e-01 71.1% 76.3%
3196091 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.60 51.0 4.59e-01 94.7% 70.5%
4016769 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.59 52.0 3.86e-01 100.0% 84.2%
3707456 223.2.1.10 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.59 45.0 3.58e-01 81.6% 74.2%
4012738 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.59 46.0 3.87e-01 85.5% 80.0%
3491998 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 45.0 3.74e-01 82.9% 74.1%
1107912 71.1.1.7 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 0.58 46.0 3.49e-01 86.8% 72.7%
4011619 708.1.2.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.58 45.0 3.78e-01 97.4% 47.8%
3910034 708.1.2.9 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › YPEH2ZP 0.58 50.0 4.35e-01 98.7% 70.8%
4948927 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.58 45.0 3.36e-01 86.8% 80.5%
3746311 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.58 51.0 3.75e-01 100.0% 90.6%
3995898 301.8.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.58 43.0 3.45e-01 80.3% 90.0%
166902 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.58 40.0 2.91e-01 73.7% 71.1%
4951146 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.58 45.0 3.34e-01 86.8% 78.6%
3189888 708.1.2.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.57 44.0 3.87e-01 85.5% 55.0%
5080210 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.57 44.0 3.18e-01 82.9% 81.8%
5033737 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.57 44.0 3.33e-01 82.9% 82.4%
1548777 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.57 44.0 3.10e-01 82.9% 82.5%
3392909 213.1.1.19 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 0.56 46.0 3.79e-01 93.4% 86.0%
4967383 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.56 48.0 3.69e-01 100.0% 93.2%
4015558 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.56 43.0 3.44e-01 85.5% 40.2%
3335638 708.1.2.11 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › STEEP1 0.56 45.0 4.16e-01 89.5% 78.0%
2516764 71.1.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB 0.56 43.0 3.30e-01 84.2% 67.9%
3528541 708.1.2.9 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › YPEH2ZP 0.56 49.0 4.29e-01 100.0% 82.6%
3408978 213.1.1.19 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 0.56 45.0 3.73e-01 93.4% 85.3%
3971310 71.1.1.13 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF1329 0.56 46.0 3.07e-01 90.8% 72.4%
3699717 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 42.0 3.30e-01 82.9% 71.8%
5019857 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.55 43.0 3.23e-01 86.8% 77.5%
4638995 71.1.1.15 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › UCP033729 0.55 42.0 3.24e-01 86.8% 75.8%
5061411 213.1.1.27 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.54 41.0 3.40e-01 82.9% 82.1%
3163979 71.1.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB 0.54 42.0 3.21e-01 86.8% 75.3%
4959370 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.54 43.0 3.39e-01 89.5% 89.3%
3196254 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.54 40.0 3.38e-01 84.2% 85.5%
3512614 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 41.0 3.58e-01 82.9% 73.9%
5046813 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 42.0 3.61e-01 82.9% 70.4%
2363 4200.1.1.1 ↗ beta barrels › YmcC-like › YmcC-like › YmcC-like › YjbF 0.53 41.0 3.20e-01 89.5% 74.9%
3632159 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.53 42.0 3.39e-01 89.5% 62.5%
2774803 11.1.5.48 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Big_8 0.53 47.0 3.73e-01 100.0% 60.0%
5037370 4200.1.1.0 ↗ beta barrels › YmcC-like › YmcC-like › YmcC-like 0.53 42.0 3.42e-01 86.8% 92.3%
5052178 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 41.0 3.65e-01 84.2% 73.6%
4958640 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.52 41.0 3.20e-01 86.8% 90.2%
3931732 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 38.0 2.50e-01 80.3% 27.9%
4013994 708.1.2.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.52 44.0 3.89e-01 97.4% 67.8%
4350660 5087.1.1.0 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 0.52 39.0 2.69e-01 82.9% 38.3%
166794 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.51 37.0 2.73e-01 77.6% 35.7%
4873643 11.1.5.48 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Big_8 0.51 44.0 3.58e-01 100.0% 62.3%
3942064 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.50 43.0 3.59e-01 98.7% 77.9%
3406827 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 38.0 2.99e-01 82.9% 65.9%
D2 medium residues 37-92
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d3aA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 44.0 2.88e-01 92.9% 47.3%
1aipA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 3.16e-01 100.0% 60.8%
3qqaA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 40.0 3.16e-01 96.4% 37.6%