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FJ591093.1__ACL81326.1__X__00058

Bact-Vir

FJ591093.1__ACL81326.1__X__00058

Identity

Accession:
FJ591093 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Aorunvirus› Silicibacter_phage_DSS3phi2

TaxID: 490912

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-141
PDB
Domain cluster: rep: MT889387.1__QOP66146.1__SEA_DANIELLEIGNACE_5__00005__D28-163
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q8rA00 3.30.1330.70 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Holliday junction resolvase RusA 0.79 64.0 6.91e-01 92.1% 99.2%
3oonA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.71 51.0 5.65e-01 93.5% 91.2%
1w5eB02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.68 44.0 4.99e-01 89.9% 85.8%
5hweA01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.67 47.0 5.26e-01 96.4% 93.5%
2zovA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.67 52.0 4.87e-01 93.5% 67.5%
1ofuA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.65 43.0 5.08e-01 89.9% 98.9%
5hy0A01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.65 46.0 5.08e-01 93.5% 92.6%
3cypB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.64 48.0 5.01e-01 90.6% 85.3%
4b45A02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.63 43.0 4.62e-01 89.9% 81.4%
2yxzD01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.62 44.0 4.41e-01 93.5% 70.4%
1ygyB03 3.30.1330.90 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 0.62 44.0 4.50e-01 75.5% 74.8%
1yawB01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.61 43.0 4.42e-01 93.5% 74.6%
6aeoB01 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.61 49.0 5.01e-01 93.5% 88.1%
3mcqA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.60 45.0 4.60e-01 100.0% 80.6%
1vk3A03 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.60 42.0 4.16e-01 93.5% 68.0%
3qvsA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.59 37.0 4.18e-01 88.5% 84.2%
2otmA00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.59 48.0 4.73e-01 92.8% 80.1%
1pf5A00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.59 41.0 4.27e-01 92.1% 76.9%
3kizA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.58 48.0 4.86e-01 97.8% 88.7%
6k96B02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 33.0 3.82e-01 87.1% 81.4%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.56 47.0 4.47e-01 89.9% 87.7%
1dihA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 38.0 4.21e-01 87.1% 88.9%
2rb9A01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.55 43.0 4.32e-01 100.0% 80.6%
2ha9B00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.55 45.0 3.24e-01 89.2% 59.3%
1p9lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 37.0 4.13e-01 84.2% 89.7%
3c8lB00 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.54 43.0 4.64e-01 100.0% 100.0%
1p1jA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 37.0 4.01e-01 88.5% 85.2%
1mgpA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.53 43.0 4.63e-01 92.1% 100.0%
3ldgA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.53 42.0 3.81e-01 90.6% 61.3%
1gx1A00 3.30.1330.50 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 0.52 44.0 4.27e-01 92.8% 99.4%
1ps9A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 44.0 3.26e-01 92.1% 94.6%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4537541 301.4.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA 0.81 67.0 7.18e-01 91.4% 100.0%
318712 301.4.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.79 64.0 6.85e-01 92.1% 97.5%
3982309 301.4.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.78 62.0 6.67e-01 91.4% 96.7%
5032184 301.4.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA 0.77 59.0 6.55e-01 91.4% 100.0%
3963267 301.4.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.76 64.0 6.76e-01 92.1% 98.4%
4156345 301.4.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.73 59.0 6.28e-01 91.4% 98.3%
5081957 301.4.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA 0.67 57.0 5.54e-01 89.9% 98.0%
3967490 301.3.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.65 50.0 5.47e-01 92.1% 97.4%
4987039 298.3.1.2 ↗ a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter 0.64 46.0 4.75e-01 74.8% 76.3%
4954850 304.111.1.1 ↗ a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C 0.64 42.0 3.16e-01 93.5% 28.0%
4047126 298.3.1.2 ↗ a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter 0.64 46.0 4.77e-01 74.8% 79.2%
4558877 301.6.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.63 50.0 5.19e-01 100.0% 89.2%
4987617 301.6.1.3 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › CetZ_C 0.63 49.0 4.62e-01 95.0% 67.9%
4172925 298.1.1.9 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.63 37.0 4.41e-01 87.1% 87.8%
4955742 301.6.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.63 44.0 4.79e-01 100.0% 87.0%
2798318 301.3.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.63 49.0 4.81e-01 92.8% 76.8%
5043912 301.6.1.3 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › CetZ_C 0.62 49.0 4.89e-01 100.0% 81.4%
5052553 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.62 41.0 4.13e-01 92.8% 66.4%
4976519 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 42.0 4.01e-01 93.5% 59.4%
3387251 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 44.0 4.67e-01 92.8% 85.0%
4947587 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 44.0 4.07e-01 93.5% 58.9%
4943512 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 42.0 4.08e-01 93.5% 63.2%
4945507 301.2.1.5 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS_C 0.61 44.0 4.36e-01 93.5% 71.0%
5032540 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 42.0 4.14e-01 92.8% 66.0%
5083251 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 43.0 3.46e-01 93.5% 38.8%
4981267 304.111.1.4 ↗ a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS 0.60 43.0 3.23e-01 93.5% 30.9%
4507920 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 42.0 4.02e-01 92.8% 61.2%
4978823 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.59 38.0 4.48e-01 86.3% 94.7%
4971967 298.1.1.3 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Inos-1-P_synth 0.59 37.0 4.14e-01 87.1% 81.9%
5069344 2485.4.1.1 ↗ a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase 0.59 45.0 4.20e-01 79.9% 88.8%
5083178 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.59 43.0 3.83e-01 93.5% 53.0%
5070713 304.111.1.1 ↗ a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C 0.58 41.0 3.05e-01 92.8% 28.0%
4332452 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.58 41.0 4.46e-01 92.8% 90.0%
4948037 2485.4.1.1 ↗ a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase 0.58 43.0 4.14e-01 78.4% 89.6%
4318787 298.1.1.9 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.57 38.0 4.11e-01 87.1% 80.0%
3987632 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.57 44.0 4.20e-01 93.5% 67.9%
4443992 298.1.1.9 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.57 38.0 4.28e-01 84.9% 88.6%
4961560 298.1.1.3 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Inos-1-P_synth 0.57 36.0 4.03e-01 88.5% 81.9%
5072748 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.57 36.0 3.87e-01 84.9% 74.8%
4950024 298.1.1.3 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Inos-1-P_synth 0.57 37.0 4.09e-01 88.5% 82.7%
4942111 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.57 44.0 3.95e-01 93.5% 58.9%
5054342 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.57 44.0 3.94e-01 93.5% 58.9%
4640361 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.57 36.0 4.25e-01 86.3% 97.8%
5076764 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.56 36.0 4.26e-01 84.9% 97.8%
4999237 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.56 43.0 3.69e-01 93.5% 49.8%
2499495 301.3.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.56 51.0 4.75e-01 99.3% 97.1%
5062518 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.56 36.0 4.09e-01 87.8% 85.7%
4985154 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.56 43.0 3.99e-01 93.5% 62.8%
6760 298.1.1.9 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.56 38.0 4.18e-01 87.1% 87.3%
5045539 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.56 36.0 4.05e-01 86.3% 89.0%
4021134 301.7.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like 0.55 46.0 4.21e-01 92.8% 66.8%
3600044 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.55 38.0 4.08e-01 87.8% 84.3%
None — 0.55 44.0 3.83e-01 93.5% 57.1%
3210036 298.1.1.23 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Semialdhyde_dhC_1 0.55 36.0 3.38e-01 86.3% 54.1%
196945 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.55 43.0 4.33e-01 100.0% 82.4%
4075510 298.1.1.9 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.54 38.0 4.18e-01 84.2% 90.0%
4967330 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.54 41.0 3.59e-01 93.5% 52.4%
3974100 2485.4.1.1 ↗ a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase 0.54 43.0 4.02e-01 84.2% 88.2%
4961816 301.6.1.3 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › CetZ_C 0.54 47.0 4.26e-01 100.0% 69.5%
3290445 298.1.1.9 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.54 38.0 4.11e-01 84.2% 87.0%
5028579 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.54 41.0 3.69e-01 92.8% 56.9%
4163553 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.53 41.0 3.33e-01 93.5% 42.6%
4935322 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.53 44.0 4.09e-01 93.5% 70.9%
5017379 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.53 41.0 3.69e-01 92.8% 58.5%
3308798 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.52 38.0 3.70e-01 90.6% 67.7%
4950990 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.52 40.0 3.65e-01 93.5% 59.0%
5054344 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.52 43.0 3.69e-01 92.8% 56.4%