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FJ713816.1__ACR54241.1__CUR052__00056
Bact-VirFJ713816.1__ACR54241.1__CUR052__00056
Identity
- Accession:
- FJ713816 ↗
- Kingdom:
- phage
Quality
80.4
mean pLDDT
Taxonomy
TaxID: 648017
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-65
Domain cluster:
representative
CATH (85)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.79 | 58.0 | 5.22e-01 | 86.2% | 57.0% |
| 2d37A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.78 | 65.0 | 4.70e-01 | 91.4% | 57.4% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.77 | 61.0 | 5.28e-01 | 89.7% | 56.0% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.77 | 63.0 | 4.45e-01 | 91.4% | 51.7% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.76 | 63.0 | 4.47e-01 | 91.4% | 57.0% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.75 | 61.0 | 4.24e-01 | 91.4% | 47.2% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.75 | 62.0 | 4.45e-01 | 91.4% | 57.3% |
| 3bwlB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.74 | 60.0 | 4.71e-01 | 89.7% | 79.7% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.74 | 61.0 | 4.76e-01 | 91.4% | 54.4% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.74 | 60.0 | 4.79e-01 | 91.4% | 63.9% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.73 | 61.0 | 5.07e-01 | 91.4% | 63.0% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.73 | 59.0 | 5.96e-01 | 98.3% | 89.5% |
| 4hh3A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.72 | 58.0 | 4.69e-01 | 89.7% | 84.2% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.72 | 49.0 | 5.01e-01 | 74.1% | 74.5% |
| 4gj4D00 | 3.30.450.260 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem NO binding associated domain | 0.72 | 59.0 | 4.73e-01 | 93.1% | 86.3% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.72 | 60.0 | 5.18e-01 | 93.1% | 59.3% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.71 | 56.0 | 4.74e-01 | 91.4% | 52.1% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.71 | 57.0 | 4.31e-01 | 91.4% | 61.8% |
| 1d06A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.70 | 56.0 | 4.39e-01 | 91.4% | 80.0% |
| 1zboA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.69 | 59.0 | 4.81e-01 | 98.3% | 85.8% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 53.0 | 5.00e-01 | 84.5% | 76.4% |
| 2r78C00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.69 | 54.0 | 4.41e-01 | 89.7% | 81.9% |
| 3oloA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.68 | 54.0 | 4.45e-01 | 89.7% | 83.8% |
| 3e4pA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.68 | 54.0 | 4.47e-01 | 89.7% | 89.0% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.68 | 57.0 | 3.68e-01 | 100.0% | 20.5% |
| 2veaA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.67 | 59.0 | 4.56e-01 | 100.0% | 70.0% |
| 3licA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.67 | 58.0 | 5.13e-01 | 100.0% | 96.6% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 46.0 | 4.67e-01 | 75.9% | 72.9% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.66 | 53.0 | 4.42e-01 | 91.4% | 65.1% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 4.62e-01 | 79.3% | 71.0% |
| 1s67L00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.65 | 52.0 | 4.22e-01 | 91.4% | 87.4% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.65 | 53.0 | 4.34e-01 | 91.4% | 64.9% |
| 3mfxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.65 | 51.0 | 4.22e-01 | 91.4% | 85.1% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 52.0 | 4.18e-01 | 93.1% | 51.6% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 41.0 | 4.36e-01 | 72.4% | 77.1% |
| 3by9B01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.64 | 52.0 | 4.00e-01 | 89.7% | 72.5% |
| 5dm6S01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.64 | 50.0 | 4.51e-01 | 89.7% | 75.6% |
| 4j3cA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.63 | 51.0 | 4.98e-01 | 96.6% | 82.8% |
| 1feuA01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.63 | 49.0 | 4.33e-01 | 89.7% | 70.3% |
| 3askA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 44.0 | 4.40e-01 | 75.9% | 72.6% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.62 | 49.0 | 3.80e-01 | 89.7% | 39.9% |
| 2budA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 45.0 | 3.92e-01 | 79.3% | 58.7% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 47.0 | 4.74e-01 | 93.1% | 84.2% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.61 | 52.0 | 3.57e-01 | 93.1% | 68.3% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 3.90e-01 | 77.6% | 56.2% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 45.0 | 3.67e-01 | 82.8% | 43.8% |
| 2vtfA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 47.0 | 3.39e-01 | 94.8% | 28.2% |
| 4q9cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 45.0 | 3.81e-01 | 94.8% | 45.7% |
| 6psyA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 50.0 | 3.42e-01 | 94.8% | 40.1% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 40.0 | 3.88e-01 | 70.7% | 60.0% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 49.0 | 4.17e-01 | 100.0% | 99.1% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 3.79e-01 | 91.4% | 47.1% |
| 1oj5A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 51.0 | 4.27e-01 | 98.3% | 98.1% |
| 6r77A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.59 | 45.0 | 3.38e-01 | 87.9% | 33.7% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 46.0 | 4.14e-01 | 89.7% | 65.5% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 42.0 | 2.71e-01 | 75.9% | 45.2% |
| 4l68A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 46.0 | 3.75e-01 | 87.9% | 45.5% |
| 6j7cA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.59 | 44.0 | 3.36e-01 | 87.9% | 100.0% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 44.0 | 4.07e-01 | 94.8% | 61.4% |
| 4lb0A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.58 | 45.0 | 3.43e-01 | 91.4% | 33.5% |
| 2i2lA01 | 2.10.70.50 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.58 | 36.0 | 3.74e-01 | 77.6% | 69.2% |
| 2gefA01 | 2.30.42.30 | Mainly Beta › Roll › Pdz3 Domain › | 0.58 | 49.0 | 3.98e-01 | 96.6% | 84.8% |
| 8gn6A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 45.0 | 2.84e-01 | 87.9% | 40.7% |
| 6hmjA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 46.0 | 3.98e-01 | 98.3% | 99.0% |
| 4aw8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 40.0 | 2.89e-01 | 75.9% | 24.2% |
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 40.0 | 3.77e-01 | 74.1% | 60.3% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 41.0 | 3.76e-01 | 89.7% | 56.8% |
| 5xd6B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 44.0 | 3.79e-01 | 87.9% | 53.2% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 3.92e-01 | 82.8% | 66.7% |
| 4kqdB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 44.0 | 3.77e-01 | 98.3% | 85.3% |
| 2v4dE01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.55 | 41.0 | 3.77e-01 | 86.2% | 63.1% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 3.40e-01 | 82.8% | 90.7% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 36.0 | 3.02e-01 | 72.4% | 36.0% |
| 4h40A02 | 2.60.40.3740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 3.23e-01 | 87.9% | 50.7% |
| 8ciwA02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.54 | 44.0 | 3.44e-01 | 93.1% | 71.4% |
| 3zqsA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.54 | 40.0 | 3.50e-01 | 79.3% | 64.8% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.54 | 45.0 | 3.53e-01 | 100.0% | 82.6% |
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 42.0 | 3.58e-01 | 91.4% | 84.0% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 42.0 | 3.29e-01 | 93.1% | 76.7% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 3.99e-01 | 87.9% | 75.4% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.52 | 43.0 | 3.27e-01 | 93.1% | 57.4% |
| 6s6yD02 | 3.30.70.520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 3.21e-01 | 93.1% | 37.1% |
| 7fisA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 42.0 | 2.73e-01 | 94.8% | 44.1% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.52 | 42.0 | 3.35e-01 | 98.3% | 50.4% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.50 | 40.0 | 3.09e-01 | 93.1% | 75.7% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033712 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.97 | 78.0 | 6.68e-01 | 84.5% | 57.6% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.90 | 72.0 | 5.94e-01 | 91.4% | 51.6% |
| 5056905 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.84 | 71.0 | 6.08e-01 | 91.4% | 60.0% |
| 4523548 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.82 | 55.0 | 4.79e-01 | 70.7% | 47.1% |
| 5012011 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.82 | 69.0 | 5.33e-01 | 93.1% | 56.0% |
| 4983682 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.78 | 64.0 | 4.84e-01 | 91.4% | 66.4% |
| 4933308 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.78 | 64.0 | 4.68e-01 | 91.4% | 57.4% |
| 3801941 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.77 | 65.0 | 5.10e-01 | 91.4% | 60.9% |
| 3725498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 56.0 | 5.24e-01 | 75.9% | 62.9% |
| 3965594 | 1.1.13.53 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_3 | 0.77 | 63.0 | 5.37e-01 | 91.4% | 56.8% |
| 3980899 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 68.0 | 5.44e-01 | 98.3% | 69.1% |
| 3788348 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.76 | 64.0 | 5.12e-01 | 93.1% | 62.6% |
| 3946849 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 59.0 | 6.22e-01 | 87.9% | 98.0% |
| 4081025 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.75 | 62.0 | 3.99e-01 | 91.4% | 26.8% |
| 2989727 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.75 | 59.0 | 4.81e-01 | 86.2% | 48.1% |
| 4313132 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.75 | 61.0 | 4.00e-01 | 91.4% | 30.0% |
| 3237442 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 61.0 | 5.16e-01 | 93.1% | 58.0% |
| 4366483 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 60.0 | 5.31e-01 | 93.1% | 61.2% |
| 3243970 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 61.0 | 5.14e-01 | 93.1% | 57.0% |
| 3720023 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 61.0 | 5.11e-01 | 93.1% | 54.0% |
| 3501754 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.73 | 60.0 | 4.99e-01 | 93.1% | 52.4% |
| 3793962 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.73 | 51.0 | 4.42e-01 | 77.6% | 47.8% |
| 3064449 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.72 | 59.0 | 4.79e-01 | 89.7% | 88.2% |
| 3389361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 57.0 | 4.90e-01 | 93.1% | 53.7% |
| 3585538 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.72 | 54.0 | 4.46e-01 | 82.8% | 46.0% |
| 3747392 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.72 | 56.0 | 5.46e-01 | 86.2% | 75.4% |
| 3582876 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.71 | 52.0 | 4.27e-01 | 81.0% | 42.9% |
| 4980683 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.71 | 55.0 | 3.60e-01 | 86.2% | 38.5% |
| 5059044 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 56.0 | 4.73e-01 | 93.1% | 52.6% |
| 4172288 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.71 | 59.0 | 5.11e-01 | 93.1% | 60.0% |
| 5033694 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.70 | 56.0 | 4.48e-01 | 91.4% | 76.8% |
| 3907200 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.70 | 51.0 | 2.88e-01 | 79.3% | 7.0% |
| 4989092 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.70 | 60.0 | 4.98e-01 | 98.3% | 85.7% |
| 4361348 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.69 | 59.0 | 4.52e-01 | 98.3% | 77.1% |
| 3415634 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.69 | 55.0 | 4.46e-01 | 89.7% | 88.7% |
| 3688604 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 58.0 | 4.75e-01 | 93.1% | 53.3% |
| 4945536 | 223.1.1.24 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 | 0.69 | 55.0 | 4.44e-01 | 89.7% | 85.2% |
| 3490245 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 54.0 | 4.69e-01 | 86.2% | 72.2% |
| 4553723 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.68 | 53.0 | 4.54e-01 | 87.9% | 52.6% |
| 3714670 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.68 | 55.0 | 4.62e-01 | 93.1% | 82.9% |
| 4950559 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.68 | 58.0 | 4.66e-01 | 98.3% | 86.7% |
| 352473 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.68 | 54.0 | 3.58e-01 | 89.7% | 38.0% |
| 3286635 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.68 | 55.0 | 4.42e-01 | 91.4% | 83.3% |
| 3596677 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.68 | 54.0 | 4.71e-01 | 91.4% | 89.5% |
| 4205711 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.68 | 58.0 | 4.35e-01 | 100.0% | 69.7% |
| 4944871 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.68 | 53.0 | 4.26e-01 | 87.9% | 80.0% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.68 | 57.0 | 4.74e-01 | 96.6% | 62.9% |
| 3255683 | 223.1.1.24 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 | 0.67 | 57.0 | 4.47e-01 | 100.0% | 79.3% |
| 5063922 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.67 | 57.0 | 4.59e-01 | 98.3% | 90.8% |
| 4980698 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.67 | 58.0 | 4.56e-01 | 98.3% | 84.0% |
| 4958334 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 52.0 | 3.91e-01 | 89.7% | 32.5% |
| 3978877 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 50.0 | 4.43e-01 | 91.4% | 54.4% |
| 5007989 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.66 | 56.0 | 4.62e-01 | 98.3% | 91.8% |
| 4980685 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.66 | 57.0 | 4.60e-01 | 98.3% | 86.1% |
| 3839955 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.66 | 51.0 | 5.25e-01 | 98.3% | 90.9% |
| 3290055 | 223.1.1.36 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD | 0.66 | 56.0 | 4.07e-01 | 98.3% | 85.3% |
| 3953578 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.66 | 54.0 | 4.18e-01 | 91.4% | 47.7% |
| 3702154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 45.0 | 4.18e-01 | 74.1% | 56.0% |
| 4957638 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.65 | 54.0 | 4.46e-01 | 98.3% | 89.6% |
| 3968741 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.65 | 56.0 | 4.14e-01 | 100.0% | 66.9% |
| 4519111 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.65 | 50.0 | 4.43e-01 | 87.9% | 56.7% |
| 3491615 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.64 | 50.0 | 3.35e-01 | 87.9% | 28.8% |
| 3247872 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.64 | 53.0 | 4.15e-01 | 93.1% | 43.2% |
| 3495447 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.64 | 50.0 | 4.01e-01 | 87.9% | 59.2% |
| 4949933 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.63 | 53.0 | 3.46e-01 | 98.3% | 35.6% |
| 4098005 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.63 | 48.0 | 4.30e-01 | 87.9% | 58.9% |
| 3366352 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.63 | 51.0 | 4.48e-01 | 93.1% | 78.9% |
| 3659859 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.62 | 48.0 | 3.22e-01 | 82.8% | 41.4% |
| 4205951 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 47.0 | 4.15e-01 | 87.9% | 54.7% |
| 3688038 | 2.1.1.194 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Mit_ribos_Mrp51 | 0.61 | 46.0 | 3.63e-01 | 82.8% | 95.4% |
| 3507146 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 47.0 | 4.18e-01 | 84.5% | 82.4% |
| 3383246 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.61 | 48.0 | 4.30e-01 | 93.1% | 61.2% |
| 4598668 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.60 | 46.0 | 4.16e-01 | 87.9% | 78.8% |
| 4928031 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 50.0 | 4.23e-01 | 98.3% | 54.9% |
| 5050324 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.58 | 50.0 | 3.16e-01 | 98.3% | 33.3% |
| 3685453 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.57 | 48.0 | 3.42e-01 | 100.0% | 97.6% |
| 4370678 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.56 | 45.0 | 2.93e-01 | 100.0% | 56.9% |
| 1310612 | 223.1.1.91 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › TraJ | 0.56 | 44.0 | 3.77e-01 | 98.3% | 85.3% |
| 4048745 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.56 | 39.0 | 3.46e-01 | 75.9% | 50.0% |
| 3255870 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.55 | 39.0 | 3.28e-01 | 77.6% | 41.9% |
| 3614175 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 41.0 | 3.40e-01 | 82.8% | 54.5% |
| 4285674 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.54 | 38.0 | 3.39e-01 | 75.9% | 50.0% |
| 4058606 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.54 | 38.0 | 3.38e-01 | 75.9% | 50.0% |
| 4248149 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.54 | 38.0 | 3.43e-01 | 77.6% | 51.8% |
| 4330501 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.54 | 38.0 | 3.07e-01 | 75.9% | 36.7% |
| 4046343 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.54 | 37.0 | 3.35e-01 | 75.9% | 48.9% |
| 3945427 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.53 | 38.0 | 3.43e-01 | 77.6% | 52.9% |
| 4447486 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.53 | 37.0 | 3.43e-01 | 77.6% | 55.0% |
| 3641525 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.51 | 40.0 | 3.04e-01 | 100.0% | 92.7% |
| 4385529 | 1.1.7.83 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › YknX_C | 0.51 | 38.0 | 3.48e-01 | 86.2% | 69.4% |
| 4091312 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.51 | 36.0 | 3.26e-01 | 75.9% | 51.8% |
D2
high
residues 70-150
Domain cluster:
rep: NC_047925.1__YP_009798321.1__HOS79_gp108__00101__D161-239
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26674.1 best | Prophage_tail_N2 | 26.7 | 8.50e-06 | 96.3% | 82.4% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m0nA02 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.75 | 61.0 | 6.29e-01 | 100.0% | 93.5% |
| 1wruA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.75 | 66.0 | 6.46e-01 | 100.0% | 88.6% |
| 7pmpA01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.74 | 62.0 | 6.40e-01 | 100.0% | 100.0% |
| 3gs9A02 | 3.55.50.40 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.74 | 64.0 | 6.11e-01 | 100.0% | 82.6% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.71 | 62.0 | 5.85e-01 | 98.8% | 90.9% |
| 5uayA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.59 | 44.0 | 4.42e-01 | 90.1% | 77.1% |
| 4k3bA05 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.57 | 41.0 | 4.18e-01 | 75.3% | 92.4% |
| 1l3iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 39.0 | 3.08e-01 | 76.5% | 91.9% |
| 5uayA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 35.0 | 3.49e-01 | 90.1% | 63.4% |
| 6j09A02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 41.0 | 4.23e-01 | 90.1% | 85.9% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 45.0 | 3.94e-01 | 92.6% | 69.6% |
| 4h3uA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 3.24e-01 | 71.6% | 87.7% |
| 4k3bA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 41.0 | 4.09e-01 | 90.1% | 81.0% |
| 4bqhA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 42.0 | 2.66e-01 | 91.4% | 49.3% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 39.0 | 3.93e-01 | 90.1% | 81.9% |
| 5efrA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 39.0 | 3.99e-01 | 90.1% | 86.4% |
| 6j09A01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 37.0 | 3.96e-01 | 77.8% | 97.0% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033374 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.82 | 73.0 | 7.18e-01 | 98.8% | 90.6% |
| 3966286 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.82 | 66.0 | 6.85e-01 | 100.0% | 93.3% |
| 185652 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.79 | 64.0 | 5.47e-01 | 100.0% | 55.5% |
| 4954564 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.77 | 70.0 | 6.41e-01 | 100.0% | 86.7% |
| 1070142 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.74 | 63.0 | 6.37e-01 | 100.0% | 93.8% |
| 4846239 | 3070.1.1.12 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd | 0.74 | 62.0 | 6.19e-01 | 100.0% | 89.3% |
| 185292 | 3070.1.1.18 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF26674 | 0.74 | 64.0 | 6.18e-01 | 100.0% | 85.4% |
| 2883219 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.73 | 61.0 | 5.90e-01 | 98.8% | 82.2% |
| 3968711 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.71 | 63.0 | 6.15e-01 | 100.0% | 90.0% |
| 4034461 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.67 | 60.0 | 5.63e-01 | 100.0% | 86.0% |
| 3238115 | 389.1.1.145 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF29138 | 0.65 | 30.0 | 3.52e-01 | 74.1% | 60.0% |
| 3733936 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.65 | 45.0 | 3.49e-01 | 72.8% | 98.3% |
| 5072501 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.59 | 42.0 | 3.96e-01 | 74.1% | 99.0% |
| 5048329 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.58 | 48.0 | 3.95e-01 | 91.4% | 69.7% |
| 3164685 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.57 | 47.0 | 3.95e-01 | 92.6% | 71.0% |
| 3972480 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.56 | 47.0 | 3.93e-01 | 92.6% | 71.0% |
| 4957408 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.56 | 40.0 | 3.73e-01 | 75.3% | 98.1% |
| 4930178 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.56 | 40.0 | 3.70e-01 | 76.5% | 93.6% |
| 4937870 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.56 | 40.0 | 3.81e-01 | 75.3% | 100.0% |
| 5040415 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.56 | 40.0 | 3.73e-01 | 76.5% | 100.0% |
| 5080834 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.55 | 39.0 | 3.67e-01 | 75.3% | 96.2% |
| 3965223 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.55 | 37.0 | 3.89e-01 | 88.9% | 77.3% |
| 3934824 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.53 | 35.0 | 3.98e-01 | 91.4% | 91.7% |
| 5082425 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.53 | 37.0 | 3.52e-01 | 74.1% | 100.0% |
| 5064953 | 873.1.1.13 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase | 0.53 | 46.0 | 3.76e-01 | 100.0% | 70.0% |
| 4661963 | 7579.1.1.32 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › FrsA-like | 0.53 | 36.0 | 2.36e-01 | 71.6% | 78.1% |
| 4990211 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.52 | 36.0 | 3.45e-01 | 72.8% | 98.0% |
| 5079022 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.51 | 37.0 | 3.40e-01 | 76.5% | 91.8% |
| 5074387 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.51 | 32.0 | 3.76e-01 | 81.5% | 96.2% |
| 3204747 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 45.0 | 3.14e-01 | 100.0% | 85.3% |
| 5003912 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 3.11e-01 | 81.5% | 98.1% |
| 3482620 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 40.0 | 2.92e-01 | 88.9% | 68.8% |
| 5025078 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.50 | 36.0 | 3.36e-01 | 76.5% | 96.2% |
| 3602264 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.50 | 37.0 | 3.66e-01 | 97.5% | 75.3% |
D3
high
residues 159-173_248-294
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.73 | 63.0 | 4.56e-01 | 100.0% | 34.3% |
| 3i8nB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.57 | 39.0 | 3.18e-01 | 100.0% | 36.5% |
| 3g7kA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 44.0 | 3.22e-01 | 100.0% | 54.0% |
| 1x5hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.27e-01 | 90.3% | 44.7% |
| 7co7D03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 42.0 | 3.72e-01 | 91.9% | 75.5% |
| 7w6yA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 41.0 | 3.74e-01 | 98.4% | 66.7% |
| 4fgmA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 44.0 | 3.77e-01 | 98.4% | 78.6% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 43.0 | 3.73e-01 | 100.0% | 60.0% |
| 3regA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 35.0 | 2.64e-01 | 74.2% | 46.8% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.50 | 41.0 | 2.89e-01 | 100.0% | 27.7% |
| 4xr7F02 | 1.10.287.3700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 38.0 | 3.46e-01 | 87.1% | 80.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033714 | 1.1.13.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail | 0.98 | 94.0 | 7.91e-01 | 100.0% | 69.5% |
| 3590379 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 74.0 | 6.48e-01 | 100.0% | 73.3% |
| 3931783 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.61 | 53.0 | 4.65e-01 | 100.0% | 70.5% |
| 3869660 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.60 | 48.0 | 2.87e-01 | 91.9% | 11.5% |
| 3293552 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.58 | 50.0 | 3.76e-01 | 96.8% | 75.2% |
| 3253366 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 46.0 | 3.87e-01 | 85.5% | 81.0% |
| 3257101 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 38.0 | 2.97e-01 | 74.2% | 38.6% |
| 3919902 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.53 | 41.0 | 2.48e-01 | 93.5% | 10.3% |
| 3579861 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 37.0 | 2.75e-01 | 75.8% | 59.2% |
| 4950602 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 3.62e-01 | 93.5% | 53.6% |
| 3945875 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 42.0 | 3.43e-01 | 100.0% | 75.7% |
| 3827943 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.51 | 37.0 | 3.40e-01 | 82.3% | 67.8% |
| 3948544 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.51 | 41.0 | 3.31e-01 | 100.0% | 44.6% |
| 3906455 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 4.17e-01 | 95.2% | 91.7% |
| 4124695 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 3.66e-01 | 93.5% | 72.2% |
D4
high
residues 182-244
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.62 | 39.0 | 3.94e-01 | 92.1% | 63.1% |
| 3w1yB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 35.0 | 2.96e-01 | 90.5% | 34.6% |
| 1j0gA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 41.0 | 3.72e-01 | 90.5% | 50.0% |
| 4d2kB00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 33.0 | 3.11e-01 | 92.1% | 43.8% |
| 5xpcA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 32.0 | 2.96e-01 | 88.9% | 40.0% |
| 5c6dA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 38.0 | 3.25e-01 | 92.1% | 40.2% |
| 6kykA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 35.0 | 3.20e-01 | 92.1% | 45.2% |
| 1zxhA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 35.0 | 3.66e-01 | 90.5% | 69.6% |
| 2xigA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.53 | 36.0 | 3.74e-01 | 71.4% | 87.3% |
| 7x4oB01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 44.0 | 3.81e-01 | 100.0% | 82.9% |
| 3hbaA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 43.0 | 3.69e-01 | 100.0% | 93.0% |
| 6mptA01 | 3.30.420.590 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.52 | 43.0 | 3.32e-01 | 100.0% | 79.9% |
| 4mtdA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.51 | 34.0 | 3.49e-01 | 71.4% | 77.8% |
| 1oeyL00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 35.0 | 3.05e-01 | 71.4% | 88.8% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 44.0 | 2.86e-01 | 100.0% | 85.5% |
| 4rayA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.51 | 35.0 | 3.69e-01 | 73.0% | 92.0% |
| 2fe3A02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.51 | 34.0 | 3.55e-01 | 71.4% | 84.2% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.50 | 43.0 | 3.17e-01 | 93.7% | 88.5% |
| 2yn0A00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.50 | 35.0 | 2.48e-01 | 76.2% | 94.0% |
| 3lmmA03 | 3.30.565.60 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › | 0.50 | 38.0 | 2.98e-01 | 90.5% | 86.0% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034618 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 1.00 | 97.0 | 9.28e-01 | 100.0% | 90.0% |
| 5002661 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.72 | 58.0 | 5.81e-01 | 100.0% | 87.7% |
| 3709956 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.61 | 36.0 | 3.46e-01 | 88.9% | 49.3% |
| 3308941 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 52.0 | 3.66e-01 | 100.0% | 81.5% |
| 3399114 | 2008.1.1.80 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › FAST_2 | 0.58 | 47.0 | 3.82e-01 | 90.5% | 99.2% |
| 3504015 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 38.0 | 3.54e-01 | 100.0% | 50.6% |
| 4982816 | 221.1.1.75 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SAMP2 | 0.58 | 33.0 | 3.25e-01 | 84.1% | 49.3% |
| 3241250 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 39.0 | 3.34e-01 | 90.5% | 43.8% |
| 4003645 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 29.0 | 3.42e-01 | 74.6% | 82.9% |
| 5074442 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.55 | 37.0 | 3.02e-01 | 73.0% | 36.3% |
| 4946386 | 806.1.1.1 ↗ | a+b four layers › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › AFOR_N | 0.54 | 36.0 | 2.54e-01 | 81.0% | 18.9% |
| 4441863 | 221.1.1.109 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Sde2_N_Ubi_vert | 0.54 | 31.0 | 3.07e-01 | 88.9% | 48.6% |
| 5038626 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.54 | 37.0 | 2.88e-01 | 73.0% | 33.1% |
| 5064561 | 806.1.1.1 ↗ | a+b four layers › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › AFOR_N | 0.53 | 36.0 | 2.59e-01 | 71.4% | 49.3% |
| 4135088 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.53 | 38.0 | 3.01e-01 | 79.4% | 42.0% |
| 4985167 | 806.1.1.1 ↗ | a+b four layers › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › AFOR_N | 0.52 | 36.0 | 2.65e-01 | 88.9% | 22.4% |
| 3588171 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.52 | 36.0 | 2.88e-01 | 74.6% | 34.5% |
| None | — | 0.52 | 36.0 | 2.93e-01 | 73.0% | 38.0% | |
| 3966575 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 44.0 | 2.98e-01 | 100.0% | 96.5% |
| 3704848 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.51 | 38.0 | 3.47e-01 | 100.0% | 58.9% |
| 3308207 | 5.1.3.22 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH | 0.50 | 42.0 | 2.86e-01 | 98.4% | 49.6% |