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FJ799488.1__ACN89972.1__X__00001
Bact-VirFJ799488.1__ACN89972.1__X__00001
Identity
- Accession:
- FJ799488 ↗
- Kingdom:
- phage
Quality
66.5
mean pLDDT
Taxonomy
Orthornavirae›
Lenarviricota›
Leviviricetes›
Norzivirales›
Fiersviridae›
Emesvirus›
Escherichia_phage_MS2
TaxID: 12022
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-65
D2
medium
residues 71-121_162-214
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03863.19 best | Phage_mat-A | 72.9 | 3.40e-20 | 51.9% | 13.7% |
| PF03863.19 | Phage_mat-A | 69.0 | 5.00e-19 | 51.0% | 13.5% |
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lshA03 | 2.20.50.20 | Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 | 0.74 | 43.0 | 4.41e-01 | 93.3% | 60.2% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.73 | 52.0 | 4.63e-01 | 96.2% | 52.4% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.72 | 49.0 | 4.09e-01 | 92.3% | 42.0% |
| 4gf4A00 | 2.40.160.180 | Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB | 0.71 | 58.0 | 4.15e-01 | 94.2% | 30.4% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.71 | 55.0 | 4.83e-01 | 96.2% | 55.5% |
| 1kmoA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.69 | 60.0 | 3.76e-01 | 93.3% | 19.8% |
| 1by5A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.68 | 59.0 | 3.67e-01 | 94.2% | 21.5% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.67 | 57.0 | 3.70e-01 | 92.3% | 21.6% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.67 | 57.0 | 3.45e-01 | 91.3% | 14.8% |
| 6gp1A00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.65 | 32.0 | 4.00e-01 | 78.8% | 75.4% |
| 1fepA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.64 | 54.0 | 3.40e-01 | 91.3% | 17.4% |
| 1t5rB00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.64 | 58.0 | 4.21e-01 | 99.0% | 95.6% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 47.0 | 3.90e-01 | 83.7% | 46.5% |
| 2w16A03 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.63 | 53.0 | 3.37e-01 | 92.3% | 22.8% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.62 | 52.0 | 3.33e-01 | 91.3% | 24.2% |
| 2ervA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.62 | 44.0 | 3.88e-01 | 81.7% | 51.3% |
| 4meeA00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.61 | 54.0 | 3.86e-01 | 96.2% | 51.2% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.61 | 39.0 | 3.64e-01 | 85.6% | 50.4% |
| 1aq3A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.60 | 41.0 | 3.80e-01 | 92.3% | 55.8% |
| 3qq2B00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.60 | 52.0 | 3.99e-01 | 97.1% | 57.6% |
| 1fw3A00 | 2.40.230.10 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 | 0.60 | 42.0 | 3.21e-01 | 92.3% | 30.4% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.59 | 51.0 | 4.12e-01 | 96.2% | 49.8% |
| 4rlcA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 42.0 | 3.86e-01 | 93.3% | 57.8% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.58 | 52.0 | 4.20e-01 | 100.0% | 82.4% |
| 3bghB01 | 3.30.160.180 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Putative neuraminyllactose-binding hemagglutinin homolog like domain | 0.57 | 49.0 | 4.19e-01 | 94.2% | 61.4% |
| 3anzC00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.57 | 50.0 | 3.69e-01 | 99.0% | 84.4% |
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.57 | 50.0 | 4.17e-01 | 100.0% | 65.6% |
| 5azsA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.56 | 42.0 | 4.60e-01 | 82.7% | 97.6% |
| 3zghA00 | 2.60.40.3400 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 50.0 | 4.16e-01 | 97.1% | 98.9% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.56 | 33.0 | 3.67e-01 | 82.7% | 73.5% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.55 | 49.0 | 4.04e-01 | 99.0% | 54.4% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.55 | 44.0 | 3.90e-01 | 85.6% | 64.9% |
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.55 | 44.0 | 4.04e-01 | 89.4% | 65.0% |
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.55 | 44.0 | 4.09e-01 | 88.5% | 68.9% |
| 1ek9A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.54 | 45.0 | 2.98e-01 | 89.4% | 58.4% |
| 1yqzA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.54 | 36.0 | 3.57e-01 | 100.0% | 64.8% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.54 | 46.0 | 4.22e-01 | 97.1% | 72.1% |
| 2vzsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.79e-01 | 75.0% | 77.3% |
| 1q42A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.20e-01 | 92.3% | 47.8% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 43.0 | 3.43e-01 | 93.3% | 84.0% |
| 4gb5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 39.0 | 3.56e-01 | 85.6% | 82.4% |
| 3gzrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 34.0 | 3.14e-01 | 95.2% | 51.8% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4668983 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.77 | 58.0 | 4.94e-01 | 96.2% | 50.6% |
| 3787225 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.74 | 57.0 | 4.61e-01 | 96.2% | 43.6% |
| 3808882 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.74 | 61.0 | 5.04e-01 | 99.0% | 52.0% |
| 4582939 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.73 | 60.0 | 4.08e-01 | 89.4% | 27.5% |
| 4618904 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.71 | 51.0 | 3.42e-01 | 90.4% | 20.3% |
| 4679157 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.71 | 51.0 | 3.40e-01 | 90.4% | 20.4% |
| 4393174 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.71 | 50.0 | 3.36e-01 | 90.4% | 20.0% |
| 3968185 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.71 | 57.0 | 3.64e-01 | 93.3% | 19.8% |
| 3941832 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.70 | 51.0 | 3.40e-01 | 91.3% | 20.5% |
| 4823574 | 4030.1.1.1 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › F_actin_cap_B | 0.69 | 54.0 | 4.71e-01 | 96.2% | 55.1% |
| 3944481 | 5084.1.1.38 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Toluene_X | 0.69 | 53.0 | 4.71e-01 | 89.4% | 57.4% |
| 3398781 | 5087.3.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd | 0.68 | 57.0 | 4.12e-01 | 96.2% | 32.6% |
| 4020798 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.68 | 61.0 | 4.63e-01 | 99.0% | 81.6% |
| 1758278 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.67 | 59.0 | 3.65e-01 | 94.2% | 20.8% |
| 3326287 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.67 | 54.0 | 5.19e-01 | 99.0% | 75.8% |
| 4524066 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.66 | 56.0 | 3.46e-01 | 91.3% | 20.2% |
| 3965126 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.65 | 58.0 | 3.88e-01 | 96.2% | 31.0% |
| 3964265 | 5084.1.1.43 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Autotransporter | 0.65 | 57.0 | 5.13e-01 | 97.1% | 73.8% |
| 4345340 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.65 | 58.0 | 4.15e-01 | 97.1% | 51.0% |
| 4556738 | 7503.1.1.1 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG | 0.65 | 51.0 | 3.92e-01 | 84.6% | 69.7% |
| 1718522 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.65 | 57.0 | 3.52e-01 | 93.3% | 21.8% |
| 3977398 | 5084.1.1.16 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom | 0.64 | 58.0 | 5.04e-01 | 100.0% | 75.0% |
| 2719886 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.64 | 55.0 | 3.28e-01 | 95.2% | 16.4% |
| 4490044 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.63 | 52.0 | 3.67e-01 | 85.6% | 32.6% |
| 4440914 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.63 | 52.0 | 3.14e-01 | 90.4% | 13.6% |
| 2628866 | 7503.1.1.1 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG | 0.63 | 54.0 | 4.11e-01 | 96.2% | 42.8% |
| 4136159 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.62 | 50.0 | 4.20e-01 | 85.6% | 68.0% |
| 3553322 | 5089.1.1.3 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Gasdermin | 0.62 | 55.0 | 4.16e-01 | 96.2% | 55.5% |
| 4195943 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.62 | 56.0 | 3.93e-01 | 100.0% | 53.4% |
| 3236032 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.62 | 53.0 | 3.33e-01 | 94.2% | 20.2% |
| 4093339 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.61 | 53.0 | 3.42e-01 | 91.3% | 60.5% |
| 1294369 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.61 | 54.0 | 3.86e-01 | 96.2% | 51.2% |
| 5056621 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 47.0 | 4.09e-01 | 80.8% | 76.8% |
| 3985117 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.60 | 49.0 | 3.10e-01 | 90.4% | 22.6% |
| 4102065 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.60 | 52.0 | 3.89e-01 | 98.1% | 41.8% |
| 4449332 | 5084.5.1.18 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C | 0.59 | 53.0 | 3.59e-01 | 95.2% | 65.0% |
| 3277579 | 11.13.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like | 0.59 | 54.0 | 3.86e-01 | 100.0% | 84.7% |
| 3514719 | 5084.5.4.6 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › TraF_2 | 0.59 | 51.0 | 3.49e-01 | 94.2% | 46.3% |
| 200662 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.59 | 53.0 | 4.22e-01 | 100.0% | 82.7% |
| 3838722 | 5084.3.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 | 0.59 | 52.0 | 3.68e-01 | 97.1% | 49.4% |
| 4113088 | 5084.1.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane | 0.58 | 47.0 | 3.86e-01 | 100.0% | 46.3% |
| 3976052 | 5084.4.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › PLA1 | 0.57 | 49.0 | 3.70e-01 | 95.2% | 43.2% |
| 2799871 | 5089.1.1.2 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › MACPF | 0.56 | 49.0 | 3.45e-01 | 94.2% | 55.1% |
| 3975660 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.56 | 51.0 | 4.01e-01 | 99.0% | 48.6% |
| 3839653 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.56 | 49.0 | 3.93e-01 | 99.0% | 56.7% |
| 3949218 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.56 | 47.0 | 3.07e-01 | 90.4% | 56.0% |
| 3506521 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 4.25e-01 | 85.6% | 88.3% |
| 3164538 | 5084.1.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane | 0.55 | 50.0 | 4.05e-01 | 100.0% | 64.1% |
| 1502527 | 5089.1.1.4 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › MACPF_1 | 0.55 | 47.0 | 3.39e-01 | 94.2% | 59.7% |
| 3782878 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.54 | 46.0 | 3.21e-01 | 93.3% | 31.0% |
| 4472476 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.54 | 47.0 | 3.38e-01 | 99.0% | 41.5% |
| 3840004 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.53 | 45.0 | 3.54e-01 | 95.2% | 44.1% |
| 3628385 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.53 | 45.0 | 3.41e-01 | 94.2% | 42.4% |
| 3574639 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 43.0 | 3.17e-01 | 91.3% | 61.4% |
| 4383723 | 5087.3.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C | 0.52 | 45.0 | 3.32e-01 | 100.0% | 41.3% |
| 3377619 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.52 | 41.0 | 3.44e-01 | 88.5% | 63.9% |
| 3607231 | 7504.1.1.3 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Maf | 0.51 | 42.0 | 3.29e-01 | 92.3% | 77.2% |
| 1065880 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.51 | 43.0 | 3.43e-01 | 93.3% | 84.0% |
| 4520610 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.51 | 42.0 | 2.87e-01 | 93.3% | 59.3% |
| 3372143 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.51 | 41.0 | 3.86e-01 | 92.3% | 72.8% |
| 3972938 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.50 | 41.0 | 2.82e-01 | 93.3% | 61.4% |
| 3837948 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.50 | 45.0 | 3.70e-01 | 100.0% | 64.7% |
D3
medium
residues 122-161_215-239