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FJ799680.1__ACN90707.1__X__00004
Bact-VirFJ799680.1__ACN90707.1__X__00004
Identity
- Accession:
- FJ799680 ↗
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Taxonomy
Orthornavirae›
Lenarviricota›
Leviviricetes›
Norzivirales›
Fiersviridae›
Emesvirus›
Escherichia_phage_MS2
TaxID: 12022
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-78
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03431.19 best | RNA_replicase_B | 44.6 | 1.10e-11 | 100.0% | 9.4% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lfrA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.61 | 43.0 | 3.57e-01 | 83.6% | 41.4% |
| 4cq4B00 | 6.10.340.10 | Special › Helix non-globular › hypothetical protein mp506/mpn330, domain 1 › | 0.60 | 35.0 | 3.02e-01 | 72.1% | 34.3% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.58 | 47.0 | 4.03e-01 | 91.8% | 59.8% |
| 6xy4A01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.57 | 38.0 | 3.10e-01 | 70.5% | 35.0% |
| 4kh7B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 38.0 | 3.14e-01 | 77.0% | 37.3% |
| 6u0m401 | 3.30.1640.10 | Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1 | 0.55 | 39.0 | 3.24e-01 | 75.4% | 62.4% |
| 4kf9A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 36.0 | 2.87e-01 | 72.1% | 85.8% |
| 2d6yA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 40.0 | 2.91e-01 | 83.6% | 76.9% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 37.0 | 3.51e-01 | 82.0% | 62.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4524125 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.62 | 46.0 | 3.08e-01 | 80.3% | 21.2% |
| 3329061 | 5050.1.1.2 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 | 0.57 | 41.0 | 3.14e-01 | 78.7% | 51.3% |
| 3446958 | 109.4.1.349 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIX1 | 0.52 | 39.0 | 2.55e-01 | 85.2% | 48.8% |
| 3727885 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.51 | 40.0 | 3.55e-01 | 86.9% | 88.9% |