Back to structures

FJ822135.1__ACO36935.1__lb338_phage_14__00014

Bact-Vir

FJ822135.1__ACO36935.1__lb338_phage_14__00014

Identity

Accession:
FJ822135 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-87
PDB
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3actA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.71 53.0 3.65e-01 78.8% 87.2%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.69 62.0 5.73e-01 100.0% 94.4%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 53.0 4.49e-01 83.5% 96.5%
1xkpC00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.68 62.0 5.38e-01 100.0% 90.5%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 52.0 4.37e-01 82.4% 97.8%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 50.0 4.31e-01 80.0% 69.5%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 51.0 4.21e-01 82.4% 92.6%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 51.0 4.45e-01 82.4% 100.0%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 51.0 4.43e-01 82.4% 100.0%
4iq0C02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.65 51.0 4.03e-01 84.7% 69.6%
2htaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 47.0 3.29e-01 78.8% 92.9%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 49.0 4.26e-01 82.4% 100.0%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 46.0 3.18e-01 82.4% 23.4%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 51.0 4.17e-01 100.0% 46.6%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.63 45.0 4.31e-01 75.3% 97.0%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.62 47.0 3.93e-01 81.2% 96.7%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.62 48.0 4.69e-01 83.5% 97.9%
4h0oA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 45.0 3.59e-01 80.0% 38.2%
5f7uA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.60 52.0 3.93e-01 100.0% 95.6%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.60 44.0 3.59e-01 76.5% 52.3%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 52.0 3.58e-01 98.8% 96.4%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.60 53.0 4.01e-01 97.6% 98.5%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.60 49.0 4.19e-01 92.9% 73.3%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 47.0 3.99e-01 85.9% 72.7%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 3.99e-01 85.9% 71.0%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 48.0 3.26e-01 91.8% 73.8%
5gm0A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 4.09e-01 87.1% 74.6%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 48.0 3.17e-01 94.1% 36.2%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.57 44.0 4.52e-01 83.5% 98.8%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 48.0 3.03e-01 94.1% 97.3%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 48.0 3.10e-01 94.1% 36.3%
4ozxA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 45.0 3.18e-01 90.6% 98.2%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.05e-01 92.9% 92.0%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 3.57e-01 78.8% 60.5%
1e3hA03 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.55 37.0 2.78e-01 70.6% 80.3%
6fcvB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.15e-01 98.8% 87.7%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.54 49.0 3.88e-01 98.8% 63.7%
3ruyA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 48.0 4.06e-01 100.0% 58.7%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.54 40.0 3.59e-01 82.4% 57.3%
1ohvA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 46.0 3.78e-01 100.0% 55.4%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 3.08e-01 98.8% 37.5%
2cjgA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 45.0 3.77e-01 100.0% 57.8%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 40.0 3.07e-01 83.5% 58.8%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 3.81e-01 98.8% 76.4%
3vm7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 37.0 3.61e-01 95.3% 68.4%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.43e-01 98.8% 62.3%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 38.0 2.86e-01 78.8% 88.6%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.50 43.0 4.27e-01 95.3% 89.9%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4082107 7089.1.1.3 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › MmoD 0.77 49.0 5.36e-01 72.9% 78.6%
3597339 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.72 53.0 3.68e-01 76.5% 68.5%
4988423 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.72 50.0 5.20e-01 72.9% 81.2%
3690594 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.71 50.0 2.99e-01 72.9% 96.4%
3979335 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.70 61.0 5.47e-01 97.6% 89.2%
4487335 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.67 52.0 3.65e-01 83.5% 68.0%
3233897 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 48.0 4.29e-01 75.3% 55.0%
3211176 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.67 44.0 3.12e-01 77.6% 22.7%
2552758 9.1.1.24 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.66 51.0 4.35e-01 82.4% 93.4%
3244243 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.66 42.0 3.18e-01 76.5% 28.2%
3214923 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.66 46.0 3.50e-01 78.8% 31.8%
3999577 4099.1.1.28 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29108 0.66 56.0 5.65e-01 98.8% 95.3%
3225057 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.65 44.0 3.37e-01 78.8% 31.4%
3218903 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.65 45.0 3.37e-01 76.5% 29.0%
3247669 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.65 45.0 3.17e-01 80.0% 23.6%
5030621 241.9.1.2 a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF5655 0.65 57.0 5.29e-01 100.0% 84.5%
3233005 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.65 45.0 3.18e-01 77.6% 23.9%
3276429 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.65 48.0 3.25e-01 77.6% 37.1%
163179 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.64 47.0 3.29e-01 78.8% 92.9%
3224579 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.64 51.0 3.37e-01 83.5% 24.5%
2012 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.64 46.0 3.18e-01 82.4% 23.4%
3462291 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.64 53.0 3.60e-01 90.6% 42.8%
3215166 3180.1.1.0 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related 0.63 47.0 4.57e-01 78.8% 76.8%
4284036 4099.1.1.26 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 0.63 53.0 4.96e-01 94.1% 84.8%
4958733 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 42.0 4.30e-01 82.4% 72.5%
3596915 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 55.0 3.36e-01 98.8% 34.9%
3797677 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 46.0 3.16e-01 77.6% 39.7%
3242542 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.62 43.0 3.01e-01 78.8% 23.5%
3212555 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.62 42.0 3.66e-01 78.8% 45.4%
3221612 12.3.1.42 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.62 43.0 3.12e-01 71.8% 28.9%
3219544 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.62 47.0 3.19e-01 80.0% 22.7%
3228574 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.62 41.0 2.92e-01 77.6% 22.8%
3212404 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 42.0 2.99e-01 78.8% 23.5%
3984091 3180.1.1.1 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG 0.61 46.0 4.28e-01 80.0% 73.3%
None 0.61 53.0 3.26e-01 98.8% 34.9%
3409029 331.23.1.2 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C 0.61 45.0 4.78e-01 91.8% 90.5%
3597489 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 53.0 3.45e-01 97.6% 93.4%
4029170 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.60 42.0 3.99e-01 71.8% 65.0%
3233582 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 48.0 3.18e-01 83.5% 24.8%
3227136 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 41.0 3.05e-01 78.8% 28.1%
3707133 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.60 53.0 4.00e-01 98.8% 94.3%
3242741 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.59 42.0 3.01e-01 77.6% 24.0%
3697524 9.2.1.7 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › PF30970 0.59 49.0 4.81e-01 88.2% 90.0%
4243201 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 50.0 3.85e-01 90.6% 73.5%
3222257 2484.1.1.109 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › bVLRF1 0.59 43.0 3.46e-01 76.5% 60.0%
1952891 9.1.1.9 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeT 0.59 52.0 4.49e-01 100.0% 88.2%
4031750 274.1.1.25 a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.59 47.0 4.45e-01 84.7% 89.9%
3605319 5.1.4.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 0.58 54.0 3.39e-01 98.8% 76.7%
4995145 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.58 47.0 4.71e-01 89.4% 85.9%
5001279 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.58 49.0 3.29e-01 94.1% 33.7%
5015520 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.58 47.0 3.55e-01 88.2% 37.6%
3586827 274.1.1.25 a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.58 43.0 3.96e-01 80.0% 70.4%
3709736 5.1.4.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 0.58 53.0 3.39e-01 100.0% 80.3%
3708791 77.3.1.3 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.58 41.0 3.12e-01 77.6% 30.5%
3601857 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 38.0 3.81e-01 70.6% 93.3%
5022797 12.6.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related 0.56 50.0 3.76e-01 100.0% 79.1%
3264341 5.1.4.147 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N 0.56 46.0 3.19e-01 94.1% 33.2%
3388732 331.1.1.5 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.55 42.0 4.25e-01 96.5% 82.4%
3177260 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.55 48.0 3.47e-01 95.3% 63.0%
3227515 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 49.0 4.21e-01 96.5% 95.3%
4970968 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.54 45.0 4.13e-01 91.8% 80.5%
4975323 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.54 38.0 3.73e-01 95.3% 68.9%
3941131 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.54 46.0 3.12e-01 98.8% 36.6%
4962687 4972.1.1.1 beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C 0.53 40.0 3.52e-01 81.2% 60.8%
4147605 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.53 43.0 3.17e-01 92.9% 76.0%
5076987 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.52 44.0 3.03e-01 95.3% 36.2%
3798404 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 46.0 3.86e-01 98.8% 77.2%
4034422 3425.2.1.3 a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › PF29809 0.52 38.0 2.82e-01 80.0% 76.3%
3598079 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 46.0 3.87e-01 95.3% 88.1%
3889564 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.50 44.0 3.59e-01 97.6% 88.7%