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FJ822135.1__ACO37094.1__lb338_phage_173__00173
Bact-VirFJ822135.1__ACO37094.1__lb338_phage_173__00173
Identity
- Accession:
- FJ822135 ↗
- Kingdom:
- phage
Quality
91.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Mooreparkvirus›
Lactobacillus_phage_Lb338-1
TaxID: 2892342
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-53
Domain cluster:
rep: NC_028671.2__YP_009188814.1__AU086_gp49__00049__D91-138
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gh9A00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.62 | 49.0 | 4.36e-01 | 89.6% | 78.9% |
| 2pvuA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 50.0 | 4.11e-01 | 100.0% | 90.8% |
| 7zdtD02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 39.0 | 2.58e-01 | 70.8% | 21.9% |
| 1x9mA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 49.0 | 3.36e-01 | 100.0% | 66.3% |
| 4a55A01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 36.0 | 2.23e-01 | 79.2% | 10.0% |
| 3k59A02 | 3.30.70.2250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif | 0.56 | 45.0 | 4.13e-01 | 93.8% | 100.0% |
| 1q45A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 39.0 | 2.42e-01 | 87.5% | 85.2% |
| 2hjqA01 | 3.40.5.20 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › YqbF domain | 0.52 | 41.0 | 4.16e-01 | 100.0% | 100.0% |
| 4dbrA02 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 41.0 | 2.69e-01 | 91.7% | 85.9% |
| 1zd0A01 | 3.30.2380.10 | Alpha Beta › 2-Layer Sandwich › PF0523-like › CGI121/TPRKB | 0.51 | 42.0 | 3.21e-01 | 100.0% | 85.4% |
| 5gkxA00 | 3.90.1640.20 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › TON_0340 | 0.50 | 39.0 | 2.58e-01 | 95.8% | 53.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946464 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.54 | 40.0 | 3.22e-01 | 81.2% | 42.1% |
| 3413122 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.53 | 41.0 | 2.52e-01 | 89.6% | 60.1% |
| 5041452 | 303.1.1.1 ↗ | a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC | 0.53 | 45.0 | 3.21e-01 | 100.0% | 31.4% |
| 4973337 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.53 | 44.0 | 4.32e-01 | 100.0% | 92.7% |
| 4994655 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.52 | 43.0 | 4.31e-01 | 95.8% | 98.0% |
| 5040370 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.52 | 43.0 | 3.92e-01 | 100.0% | 91.4% |
| 3589228 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.52 | 41.0 | 2.91e-01 | 100.0% | 26.3% |
| 3657793 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.52 | 41.0 | 3.88e-01 | 100.0% | 95.4% |
| 4991671 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.51 | 41.0 | 4.13e-01 | 93.8% | 98.0% |
| 3476109 | 358.2.1.1 ↗ | a+b complex topology › SRCR-like › A heparin-binding domain › A heparin-binding domain › APP_N | 0.51 | 41.0 | 3.43e-01 | 97.9% | 86.3% |
| 4991338 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.50 | 38.0 | 3.52e-01 | 100.0% | 88.0% |
D2
high
residues 60-107
Domain cluster:
rep: OP869854.1__WBF77449.1__X__00006__D51-96
D3
high
residues 113-169
Domain cluster:
rep: MK448727.1__QBX16903.1__Javan291_0027__00027__D137-191