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FJ982340.1__ACT83041.1__X__00049
Bact-VirFJ982340.1__ACT83041.1__X__00049
Identity
- Accession:
- FJ982340 ↗
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Taxonomy
TaxID: 335797
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-107
Domain cluster:
representative
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ad9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 5.62e-01 | 83.8% | 88.1% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 46.0 | 4.80e-01 | 84.8% | 70.4% |
| 5xnsC00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.71 | 47.0 | 5.54e-01 | 81.9% | 100.0% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 48.0 | 4.89e-01 | 85.7% | 69.5% |
| 2fswA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 46.0 | 4.75e-01 | 84.8% | 68.6% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.69 | 50.0 | 5.66e-01 | 82.9% | 97.5% |
| 4esjA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 46.0 | 4.93e-01 | 82.9% | 80.0% |
| 1sfuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 45.0 | 5.22e-01 | 89.5% | 100.0% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 5.40e-01 | 99.0% | 94.1% |
| 2lsoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 5.33e-01 | 85.7% | 94.0% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 45.0 | 4.66e-01 | 84.8% | 72.0% |
| 2di3A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 47.0 | 5.39e-01 | 84.8% | 100.0% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 42.0 | 4.99e-01 | 82.9% | 100.0% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 43.0 | 4.90e-01 | 87.6% | 92.1% |
| 2mbfA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 5.29e-01 | 89.5% | 90.7% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.65 | 48.0 | 5.27e-01 | 77.1% | 97.7% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 40.0 | 4.77e-01 | 78.1% | 100.0% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 43.0 | 4.83e-01 | 83.8% | 92.3% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 43.0 | 4.84e-01 | 86.7% | 90.1% |
| 1xb4B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 44.0 | 5.10e-01 | 81.0% | 100.0% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 48.0 | 4.81e-01 | 84.8% | 80.2% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.20e-01 | 93.3% | 53.0% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 53.0 | 5.37e-01 | 94.3% | 94.3% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 5.30e-01 | 89.5% | 98.9% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 4.87e-01 | 96.2% | 95.3% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 48.0 | 4.27e-01 | 94.3% | 58.9% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 48.0 | 4.24e-01 | 94.3% | 58.2% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 4.95e-01 | 100.0% | 97.7% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 47.0 | 4.35e-01 | 94.3% | 65.2% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 47.0 | 4.45e-01 | 84.8% | 81.9% |
| 7l1iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 4.16e-01 | 98.1% | 58.2% |
| 1jgsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 4.29e-01 | 97.1% | 63.8% |
| 2fbiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 4.33e-01 | 94.3% | 65.4% |
| 2nrlA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 44.0 | 4.04e-01 | 81.9% | 57.9% |
| 1wj5A01 | 1.10.10.980 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CST, Suppressor of Cdc13 homolog, complex subunit STN1, N-terminal domain | 0.59 | 49.0 | 5.12e-01 | 89.5% | 99.0% |
| 1ku9B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 4.79e-01 | 96.2% | 96.6% |
| 1dm1A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 42.0 | 3.83e-01 | 81.0% | 54.8% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 4.25e-01 | 89.5% | 68.7% |
| 4xrfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 4.11e-01 | 91.4% | 62.7% |
| 7wboA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 40.0 | 3.38e-01 | 77.1% | 43.3% |
| 2ntxA02 | 1.20.58.1310 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 2 | 0.56 | 44.0 | 4.45e-01 | 90.5% | 84.5% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.56 | 31.0 | 3.59e-01 | 97.1% | 75.7% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.56 | 40.0 | 2.99e-01 | 74.3% | 82.8% |
| 1o0sA03 | 3.40.50.10380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Malic enzyme, N-terminal domain | 0.55 | 45.0 | 3.56e-01 | 89.5% | 75.1% |
| 2q0iA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 37.0 | 2.70e-01 | 74.3% | 39.0% |
| 1bdgA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.52 | 40.0 | 3.05e-01 | 85.7% | 89.6% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4452846 | 101.1.2.39 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA | 0.79 | 52.0 | 6.22e-01 | 86.7% | 100.0% |
| 5035546 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 53.0 | 5.82e-01 | 86.7% | 89.4% |
| 4976066 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 54.0 | 6.13e-01 | 79.0% | 100.0% |
| 4321924 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.74 | 58.0 | 6.09e-01 | 94.3% | 91.6% |
| 5073218 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 53.0 | 5.72e-01 | 82.9% | 86.7% |
| 4108761 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.73 | 56.0 | 4.89e-01 | 84.8% | 55.3% |
| 5001357 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 60.0 | 6.21e-01 | 94.3% | 92.0% |
| 3715856 | 101.1.2.166 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM6_C | 0.73 | 58.0 | 6.16e-01 | 88.6% | 97.8% |
| 3426878 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.72 | 55.0 | 5.69e-01 | 85.7% | 84.0% |
| 5048985 | 101.1.2.650 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7343 | 0.72 | 45.0 | 5.46e-01 | 100.0% | 100.0% |
| 4943350 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 49.0 | 5.02e-01 | 85.7% | 72.7% |
| 3447799 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.72 | 55.0 | 5.10e-01 | 85.7% | 64.6% |
| 5058906 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 52.0 | 5.90e-01 | 83.8% | 100.0% |
| 5010793 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.72 | 46.0 | 5.30e-01 | 83.8% | 90.7% |
| 5040897 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.71 | 46.0 | 5.33e-01 | 83.8% | 92.0% |
| 5080526 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.71 | 47.0 | 4.57e-01 | 85.7% | 60.9% |
| 5073598 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.71 | 54.0 | 5.83e-01 | 94.3% | 93.3% |
| 4987328 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.71 | 47.0 | 5.13e-01 | 85.7% | 82.4% |
| 5016743 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 49.0 | 5.68e-01 | 86.7% | 100.0% |
| 5058434 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.71 | 47.0 | 4.43e-01 | 88.6% | 55.4% |
| 5039088 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.71 | 48.0 | 4.26e-01 | 88.6% | 49.7% |
| 5054103 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 45.0 | 5.35e-01 | 82.9% | 97.1% |
| 5082589 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.70 | 46.0 | 5.18e-01 | 85.7% | 87.5% |
| 3281670 | 101.1.2.49 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C | 0.70 | 48.0 | 4.07e-01 | 86.7% | 43.5% |
| 4995062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 47.0 | 5.07e-01 | 86.7% | 81.1% |
| 3667879 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.69 | 53.0 | 5.39e-01 | 84.8% | 81.0% |
| 5017399 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 50.0 | 4.41e-01 | 91.4% | 52.7% |
| 3642660 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.69 | 53.0 | 4.63e-01 | 84.8% | 54.8% |
| 3385015 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.69 | 52.0 | 4.74e-01 | 85.7% | 60.0% |
| 5048954 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 53.0 | 5.18e-01 | 91.4% | 74.8% |
| 3466252 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 52.0 | 3.22e-01 | 84.8% | 15.4% |
| 5067775 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 47.0 | 5.17e-01 | 91.4% | 88.2% |
| 3663158 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.68 | 54.0 | 4.53e-01 | 84.8% | 51.4% |
| 3695839 | 101.1.2.160 ↗ | alpha arrays › HTH › HTH › winged helix domain › BLACT_WH | 0.68 | 46.0 | 5.33e-01 | 80.0% | 100.0% |
| 3372061 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.68 | 53.0 | 4.75e-01 | 87.6% | 61.4% |
| 4992272 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 51.0 | 4.91e-01 | 95.2% | 70.0% |
| 3722124 | 101.1.2.165 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC_WH_C | 0.67 | 54.0 | 5.01e-01 | 97.1% | 68.2% |
| 5034077 | 101.1.2.128 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2582 | 0.67 | 42.0 | 4.95e-01 | 81.9% | 94.3% |
| 5013440 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 47.0 | 4.25e-01 | 85.7% | 54.3% |
| 4195125 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 42.0 | 4.98e-01 | 84.8% | 95.7% |
| 3601472 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 58.0 | 5.74e-01 | 94.3% | 90.9% |
| 3464139 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.67 | 50.0 | 4.88e-01 | 84.8% | 72.2% |
| 4452595 | 101.1.2.58 ↗ | alpha arrays › HTH › HTH › winged helix domain › MukE | 0.66 | 53.0 | 4.62e-01 | 85.7% | 65.2% |
| 3551106 | 101.1.2.165 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC_WH_C | 0.66 | 53.0 | 5.13e-01 | 97.1% | 77.4% |
| 3802262 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.66 | 50.0 | 4.51e-01 | 85.7% | 60.0% |
| 3281997 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 43.0 | 4.55e-01 | 84.8% | 74.7% |
| 4973783 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 47.0 | 4.95e-01 | 87.6% | 84.2% |
| 3615162 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 57.0 | 3.74e-01 | 97.1% | 26.6% |
| 3470890 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 52.0 | 5.26e-01 | 86.7% | 89.5% |
| 5028855 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 42.0 | 4.66e-01 | 80.0% | 83.5% |
| 3995560 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 48.0 | 5.12e-01 | 85.7% | 92.2% |
| 4939541 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 47.0 | 4.49e-01 | 100.0% | 68.1% |
| 4929471 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 45.0 | 3.72e-01 | 81.9% | 41.6% |
| 134496 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.63 | 47.0 | 4.26e-01 | 94.3% | 58.5% |
| 3286591 | 101.1.2.612 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27059 | 0.63 | 48.0 | 4.29e-01 | 100.0% | 57.0% |
| 3648804 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 50.0 | 4.86e-01 | 84.8% | 80.0% |
| 1266295 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.62 | 51.0 | 3.70e-01 | 87.6% | 41.8% |
| 4022342 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.62 | 51.0 | 5.12e-01 | 87.6% | 87.6% |
| 3478717 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.62 | 53.0 | 5.15e-01 | 94.3% | 84.3% |
| 4972648 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.62 | 52.0 | 3.80e-01 | 91.4% | 43.9% |
| 4977261 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 46.0 | 4.07e-01 | 83.8% | 54.7% |
| 4999511 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 4.73e-01 | 85.7% | 75.0% |
| 3997528 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.61 | 48.0 | 4.35e-01 | 83.8% | 84.1% |
| 4955353 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 47.0 | 4.63e-01 | 85.7% | 74.8% |
| 3651024 | 101.1.2.65 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 | 0.61 | 56.0 | 5.57e-01 | 100.0% | 95.5% |
| 3250288 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 48.0 | 4.96e-01 | 87.6% | 93.0% |
| 4244937 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.60 | 47.0 | 3.38e-01 | 90.5% | 28.9% |
| 3971712 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.60 | 48.0 | 4.45e-01 | 93.3% | 68.5% |
| 3690599 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.60 | 51.0 | 3.51e-01 | 92.4% | 59.4% |
| 4998818 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.59 | 50.0 | 3.53e-01 | 93.3% | 42.1% |
| 4935902 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.59 | 49.0 | 3.81e-01 | 91.4% | 58.3% |
| 4426232 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.59 | 45.0 | 4.82e-01 | 80.0% | 98.9% |
| 3875839 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.58 | 44.0 | 4.33e-01 | 84.8% | 73.0% |
| 5071162 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.58 | 49.0 | 3.46e-01 | 91.4% | 41.2% |
| 5072417 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 47.0 | 4.57e-01 | 100.0% | 78.3% |
| 3504010 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.58 | 47.0 | 3.37e-01 | 87.6% | 39.7% |
| 3477202 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.57 | 42.0 | 3.72e-01 | 78.1% | 83.2% |
| 3632795 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.56 | 45.0 | 4.44e-01 | 86.7% | 84.5% |
| 4948481 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.56 | 44.0 | 3.32e-01 | 84.8% | 94.6% |
| 3413935 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.56 | 40.0 | 4.28e-01 | 74.3% | 91.1% |
| 4609006 | 101.1.21.0 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase | 0.56 | 48.0 | 3.80e-01 | 97.1% | 85.7% |
| 3194704 | 109.6.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF_N | 0.50 | 44.0 | 3.92e-01 | 99.0% | 81.9% |
D2
high
residues 120-252
Domain cluster:
rep: MK448969.1__QBX29840.1__Javan514_0047__00007__D129-263
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09509.16 best | Hypoth_Ymh | 83.9 | 1.10e-23 | 88.0% | 95.8% |
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.78 | 46.0 | 5.71e-01 | 83.5% | 92.9% |
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.77 | 63.0 | 6.45e-01 | 90.2% | 89.7% |
| 1o3uA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.74 | 60.0 | 6.35e-01 | 91.0% | 95.0% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.72 | 64.0 | 6.19e-01 | 93.2% | 86.2% |
| 2q00B00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.71 | 59.0 | 6.20e-01 | 90.2% | 96.7% |
| 1wolA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.71 | 57.0 | 5.92e-01 | 89.5% | 91.8% |
| 1dkxA02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.70 | 41.0 | 4.97e-01 | 81.2% | 93.8% |
| 3c18A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.66 | 48.0 | 5.04e-01 | 92.5% | 84.7% |
| 2j9wB00 | 1.20.120.1130 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain | 0.63 | 42.0 | 4.66e-01 | 90.2% | 88.9% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 40.0 | 4.39e-01 | 80.5% | 79.6% |
| 4fjvA02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.62 | 46.0 | 4.51e-01 | 97.0% | 71.5% |
| 7ys6A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 54.0 | 4.37e-01 | 98.5% | 97.4% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 51.0 | 3.99e-01 | 94.0% | 93.0% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 44.0 | 4.86e-01 | 88.0% | 98.1% |
| 2jx0A00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.59 | 47.0 | 4.80e-01 | 93.2% | 86.3% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.59 | 39.0 | 4.06e-01 | 85.7% | 72.5% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.59 | 43.0 | 4.26e-01 | 85.7% | 73.2% |
| 1td6A03 | 1.10.472.40 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 | 0.58 | 29.0 | 3.47e-01 | 78.2% | 68.5% |
| 4wjg400 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.58 | 46.0 | 3.68e-01 | 83.5% | 80.1% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.58 | 46.0 | 4.57e-01 | 93.2% | 81.0% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 44.0 | 4.66e-01 | 92.5% | 91.5% |
| 6w08A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.58 | 50.0 | 3.69e-01 | 93.2% | 72.8% |
| 2e87A01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 50.0 | 4.70e-01 | 94.7% | 91.9% |
| 6h2dS01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.57 | 40.0 | 3.41e-01 | 74.4% | 43.5% |
| 8etcb01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 50.0 | 4.90e-01 | 95.5% | 95.2% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.56 | 45.0 | 4.71e-01 | 93.2% | 91.9% |
| 1ug7A00 | 1.20.120.360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Axin interactor, dorsalization-associated protein, N-terminal domain | 0.56 | 38.0 | 3.85e-01 | 85.7% | 69.5% |
| 4yjwA00 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.56 | 48.0 | 4.59e-01 | 92.5% | 81.7% |
| 6t0bc02 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.55 | 49.0 | 4.38e-01 | 98.5% | 96.9% |
| 1n1bB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 40.0 | 3.15e-01 | 77.4% | 60.1% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 48.0 | 3.79e-01 | 97.0% | 84.0% |
| 5ermB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 40.0 | 3.14e-01 | 86.5% | 87.3% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5071980 | 601.7.1.68 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Hypoth_Ymh | 0.90 | 72.0 | 7.91e-01 | 85.7% | 100.0% |
| 5002180 | 601.7.1.68 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Hypoth_Ymh | 0.84 | 73.0 | 7.68e-01 | 91.0% | 100.0% |
| 4183373 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.78 | 65.0 | 6.72e-01 | 91.7% | 92.8% |
| 4948130 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.78 | 66.0 | 6.60e-01 | 93.2% | 87.4% |
| 4968135 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.78 | 65.0 | 6.63e-01 | 88.7% | 90.0% |
| 5074981 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.77 | 68.0 | 6.57e-01 | 93.2% | 91.7% |
| 5071763 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.76 | 67.0 | 6.40e-01 | 93.2% | 85.6% |
| 3602540 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.76 | 63.0 | 6.35e-01 | 92.5% | 86.7% |
| 4941838 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.76 | 66.0 | 6.71e-01 | 91.0% | 100.0% |
| 5011132 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.76 | 66.0 | 6.68e-01 | 92.5% | 93.8% |
| 5051989 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.76 | 66.0 | 6.63e-01 | 92.5% | 91.9% |
| 3603791 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.75 | 66.0 | 6.37e-01 | 93.2% | 88.0% |
| 5013445 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.75 | 66.0 | 6.67e-01 | 92.5% | 94.6% |
| 5031415 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.75 | 66.0 | 6.50e-01 | 92.5% | 91.4% |
| 5051315 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.75 | 66.0 | 6.31e-01 | 93.2% | 84.7% |
| 4934426 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.74 | 60.0 | 6.34e-01 | 89.5% | 94.2% |
| 4967176 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.74 | 60.0 | 6.34e-01 | 89.5% | 95.0% |
| 4967507 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.74 | 65.0 | 6.35e-01 | 93.2% | 88.3% |
| 5006341 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.74 | 61.0 | 6.22e-01 | 87.2% | 90.6% |
| 5030971 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.73 | 64.0 | 6.32e-01 | 93.2% | 89.2% |
| 4994061 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.70 | 61.0 | 5.97e-01 | 92.5% | 92.3% |
| 3226726 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.70 | 46.0 | 4.89e-01 | 85.0% | 76.5% |
| 3636670 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.68 | 45.0 | 4.05e-01 | 76.7% | 49.4% |
| 5072538 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.67 | 58.0 | 5.07e-01 | 93.2% | 97.5% |
| 4017167 | 5001.1.1.85 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Fung_rhodopsin | 0.67 | 61.0 | 4.80e-01 | 100.0% | 94.3% |
| 3484915 | 3890.1.1.0 ↗ | alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins | 0.65 | 52.0 | 4.18e-01 | 93.2% | 44.3% |
| 2329732 | 3718.1.1.1 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT | 0.64 | 40.0 | 3.92e-01 | 82.7% | 56.2% |
| 3721384 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.62 | 54.0 | 4.91e-01 | 93.2% | 92.0% |
| 3972353 | 503.1.1.0 ↗ | extended segments › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein | 0.61 | 38.0 | 4.03e-01 | 91.7% | 69.2% |
| 3593997 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.58 | 40.0 | 4.07e-01 | 93.2% | 71.5% |
| 5060134 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.58 | 50.0 | 4.85e-01 | 94.7% | 96.0% |
| 3997600 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.58 | 51.0 | 3.93e-01 | 100.0% | 92.4% |
| 4947163 | 601.30.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › MMR_HSR1 | 0.58 | 50.0 | 4.78e-01 | 95.5% | 92.5% |
| 4951405 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.58 | 50.0 | 4.92e-01 | 95.5% | 95.2% |
| 3725297 | 3755.4.1.45 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF30922 | 0.57 | 43.0 | 4.15e-01 | 86.5% | 70.0% |
| 5008641 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.57 | 52.0 | 4.86e-01 | 99.2% | 81.9% |
| 5008017 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.56 | 49.0 | 4.86e-01 | 95.5% | 90.7% |
| 3818176 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.55 | 49.0 | 4.21e-01 | 97.0% | 80.0% |
| 3437243 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.55 | 48.0 | 4.81e-01 | 96.2% | 91.9% |
| 3230738 | 5001.1.1.63 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srab | 0.55 | 48.0 | 3.69e-01 | 99.2% | 86.2% |
| 4015573 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.55 | 44.0 | 4.76e-01 | 100.0% | 100.0% |
| 3279913 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 41.0 | 3.59e-01 | 77.4% | 63.7% |
| 4957285 | 192.29.1.306 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4872 | 0.54 | 46.0 | 4.47e-01 | 93.2% | 82.7% |
| 3195066 | 192.29.1.148 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF3433 | 0.54 | 46.0 | 4.31e-01 | 93.2% | 83.5% |
| 3941867 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.54 | 40.0 | 3.44e-01 | 76.7% | 89.0% |
| 3637538 | 601.1.2.63 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › HIP1R | 0.54 | 45.0 | 4.03e-01 | 93.2% | 63.2% |
| 3736715 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.54 | 45.0 | 4.06e-01 | 92.5% | 66.1% |
| 3676620 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.53 | 45.0 | 3.19e-01 | 91.7% | 83.0% |
| 3997336 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 43.0 | 4.44e-01 | 88.7% | 99.2% |
| 4944826 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.52 | 40.0 | 3.18e-01 | 82.0% | 40.7% |
| 4509256 | 3285.1.1.1 ↗ | alpha duplicates or obligate multimers › Alix V domain › Alix V domain › Alix V domain › ALIX_LYPXL_bnd | 0.52 | 46.0 | 3.34e-01 | 97.0% | 87.9% |
| 3608391 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 36.0 | 3.58e-01 | 74.4% | 90.3% |
| 3465693 | 4177.1.1.11 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › DUF632 | 0.50 | 43.0 | 3.86e-01 | 93.2% | 77.3% |