←Back to structures

FM163528.1__CAQ57823.1__X__00028

Bact-Vir

FM163528.1__CAQ57823.1__X__00028

Identity

Accession:
FM163528 ↗
Kingdom:
phage

Quality

80.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aliceevansviridae› Streptococcus_phage_PH15

TaxID: 537874

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-72
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07116.17 best DUF1372 59.8 3.50e-16 94.4% 44.9%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x8nA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.66 45.0 4.07e-01 70.8% 80.4%
2e1bA02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.55 38.0 3.12e-01 72.2% 45.0%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 3.11e-01 75.0% 37.9%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 34.0 2.80e-01 70.8% 70.5%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2546576 3740.1.1.1 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C 0.86 37.0 2.34e-01 90.3% 10.3%
4950628 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.74 39.0 2.56e-01 83.3% 13.6%
4962768 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.69 48.0 3.83e-01 72.2% 65.2%
3196317 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.66 49.0 3.86e-01 80.6% 42.5%
4972712 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.63 43.0 3.71e-01 70.8% 74.8%
5020059 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.63 43.0 3.84e-01 70.8% 83.0%
4980465 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 43.0 4.01e-01 73.6% 70.0%
4003370 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 42.0 4.23e-01 72.2% 78.7%
4982692 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.61 42.0 3.57e-01 70.8% 73.9%
4391637 245.2.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd 0.59 40.0 3.81e-01 72.2% 58.9%
3425564 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 39.0 2.41e-01 73.6% 96.4%
4963561 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.56 42.0 2.79e-01 80.6% 69.5%
4011957 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 44.0 3.70e-01 81.9% 79.1%
5051015 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 45.0 3.51e-01 90.3% 66.5%
5051694 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.53 36.0 3.23e-01 72.2% 84.5%
5045528 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 36.0 2.40e-01 75.0% 32.9%
None — 0.51 36.0 2.55e-01 76.4% 44.5%
3661053 5.1.5.132 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF7899 0.50 34.0 2.12e-01 70.8% 24.3%