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FM207411.1__CAR63405.1__SRSM4_208__00208

Bact-Vir

FM207411.1__CAR63405.1__SRSM4_208__00208

Identity

Accession:
FM207411 ↗
Kingdom:
phage

Quality

92.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Gibbetvirus› Synechococcus_phage_S-RSM4

TaxID: 555387

Cluster

View cluster (51 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-110
PDB
Domain cluster: rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.96 68.0 7.99e-01 86.5% 98.7%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.85 46.0 5.80e-01 76.0% 86.2%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 50.0 4.59e-01 82.7% 55.4%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 40.0 4.11e-01 76.9% 59.0%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 38.0 4.39e-01 73.1% 86.1%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.74e-01 84.6% 88.9%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.62 38.0 4.02e-01 80.8% 68.8%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.59 25.0 3.05e-01 82.7% 57.6%
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.58 51.0 4.91e-01 96.2% 94.0%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.56 34.0 3.78e-01 76.0% 75.9%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 29.0 3.45e-01 70.2% 83.1%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.52 43.0 3.82e-01 91.3% 76.3%
2evrA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.52 33.0 2.95e-01 79.8% 45.3%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.81e-01 86.5% 82.0%
3wodG00 2.30.30.1250 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 3.62e-01 79.8% 66.9%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.51 31.0 2.74e-01 78.8% 41.1%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4813032 4.1.1.328 ↗ beta barrels › SH3 › SH3 › SH3 › Sm_like 0.94 68.0 7.82e-01 89.4% 97.5%
3167351 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.76 43.0 4.72e-01 77.9% 67.0%
3396989 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.71 41.0 4.23e-01 77.9% 60.0%
4030011 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.71 44.0 4.78e-01 75.0% 73.3%
3277139 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.70 42.0 4.09e-01 77.9% 54.8%
2581118 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.70 40.0 3.90e-01 76.9% 51.8%
3971321 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.70 37.0 4.50e-01 77.9% 78.3%
4293453 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 41.0 4.70e-01 91.3% 77.5%
3712189 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 45.0 4.83e-01 81.7% 76.7%
3922676 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.69 47.0 4.81e-01 77.9% 73.0%
3249844 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.68 44.0 4.73e-01 77.9% 76.7%
3699819 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.67 45.0 4.72e-01 76.9% 74.7%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 34.0 4.14e-01 76.9% 78.5%
3992026 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.63 36.0 4.35e-01 91.3% 89.2%
3700770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 35.0 4.40e-01 79.8% 95.0%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 38.0 4.18e-01 76.9% 76.5%
3741267 207.1.1.454 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DIPSY 0.60 30.0 3.97e-01 92.3% 94.0%
3069457 1053.1.1.0 ↗ beta barrels › Factor H-binding protein (fHbp) N-terminal beta-barrel domain › Factor H-binding protein (fHbp) N-terminal beta-barrel domain › Factor H-binding protein (fHbp) N-terminal beta-barrel domain 0.60 28.0 3.49e-01 85.6% 73.7%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 33.0 4.01e-01 76.9% 89.2%
3497683 4.1.1.309 ↗ beta barrels › SH3 › SH3 › SH3 › MRP-S34 0.57 41.0 3.63e-01 86.5% 51.3%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 35.0 3.93e-01 85.6% 80.0%
4982958 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.55 40.0 4.14e-01 88.5% 80.0%
3828823 3324.1.1.2 ↗ extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases 0.54 46.0 3.45e-01 94.2% 42.3%
3422852 4.1.1.85 ↗ beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.53 46.0 4.33e-01 94.2% 85.6%
3365658 3324.1.1.1 ↗ extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › MTR4_beta-barrel 0.53 45.0 3.46e-01 94.2% 45.7%
3515127 4.1.1.280 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4176 0.53 37.0 3.91e-01 76.9% 81.1%
4371403 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.52 27.0 2.69e-01 97.1% 44.5%