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FN594518.1__CBH51579.1__SBWP25_0009__00009
Bact-VirFN594518.1__CBH51579.1__SBWP25_0009__00009
Identity
- Accession:
- FN594518 ↗
- Kingdom:
- phage
Quality
39.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Tunggulvirus›
Pseudomonas_phage_phi2
TaxID: 1450169
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-107_133-193
D2
medium
residues 263-319
D3
medium
residues 331-375
Domain cluster:
rep: LC667451.1__BDD79631.1__X__00112__D15-58
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ccgA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.93 | 80.0 | 5.07e-01 | 91.1% | 80.4% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.91 | 81.0 | 7.16e-01 | 100.0% | 71.9% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.90 | 69.0 | 5.67e-01 | 88.9% | 47.4% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.90 | 76.0 | 5.70e-01 | 100.0% | 40.8% |
| 4ofzA01 | 1.20.58.1800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 79.0 | 5.76e-01 | 100.0% | 53.1% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.86 | 77.0 | 6.70e-01 | 100.0% | 73.1% |
| 1gnlA01 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.86 | 75.0 | 5.21e-01 | 97.8% | 31.7% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 73.0 | 6.18e-01 | 95.6% | 68.5% |
| 3rklA00 | 6.10.140.1640 | Special › Helix non-globular › Helix Hairpins › | 0.84 | 73.0 | 6.08e-01 | 100.0% | 56.2% |
| 3t5vA00 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.84 | 75.0 | 4.49e-01 | 100.0% | 15.4% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.83 | 74.0 | 5.47e-01 | 100.0% | 41.1% |
| 8kcaB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.83 | 66.0 | 4.33e-01 | 88.9% | 22.8% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 71.0 | 6.67e-01 | 100.0% | 91.2% |
| 3ilxA02 | 1.10.287.2170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 65.0 | 6.60e-01 | 86.7% | 88.6% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.82 | 73.0 | 6.46e-01 | 100.0% | 71.9% |
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.82 | 57.0 | 3.37e-01 | 73.3% | 10.6% |
| 1ak2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.82 | 58.0 | 3.64e-01 | 75.6% | 16.4% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.82 | 71.0 | 5.31e-01 | 100.0% | 40.2% |
| 4c91A03 | 1.20.58.2150 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 72.0 | 4.76e-01 | 100.0% | 34.6% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.81 | 71.0 | 6.33e-01 | 100.0% | 70.3% |
| 1nstA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 56.0 | 3.37e-01 | 77.8% | 11.7% |
| 2ogiB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.80 | 68.0 | 4.36e-01 | 93.3% | 78.2% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.78 | 68.0 | 5.49e-01 | 100.0% | 51.1% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 67.0 | 5.15e-01 | 100.0% | 45.2% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.77 | 67.0 | 5.08e-01 | 100.0% | 72.7% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.77 | 66.0 | 5.98e-01 | 100.0% | 92.2% |
| 2b3tB01 | 6.10.140.1980 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 64.0 | 5.73e-01 | 100.0% | 66.2% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.76 | 63.0 | 5.66e-01 | 100.0% | 65.6% |
| 1st6A04 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.76 | 66.0 | 4.88e-01 | 100.0% | 94.0% |
| 2r1iA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.76 | 56.0 | 3.98e-01 | 80.0% | 34.6% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.74 | 59.0 | 5.30e-01 | 86.7% | 82.0% |
| 4in3B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.74 | 62.0 | 3.47e-01 | 100.0% | 7.6% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 59.0 | 5.21e-01 | 100.0% | 62.2% |
| 2jx4A01 | 6.10.140.460 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 58.0 | 5.76e-01 | 100.0% | 89.6% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.72 | 61.0 | 4.60e-01 | 100.0% | 43.6% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.72 | 59.0 | 5.12e-01 | 100.0% | 96.1% |
| 3bemB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.72 | 55.0 | 3.49e-01 | 82.2% | 23.9% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.72 | 56.0 | 4.58e-01 | 88.9% | 97.7% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.72 | 60.0 | 4.31e-01 | 100.0% | 32.2% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.71 | 58.0 | 4.59e-01 | 100.0% | 46.2% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 62.0 | 4.92e-01 | 100.0% | 63.8% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.71 | 60.0 | 4.83e-01 | 100.0% | 48.9% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.70 | 57.0 | 5.00e-01 | 100.0% | 59.7% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 57.0 | 5.34e-01 | 100.0% | 84.5% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.69 | 57.0 | 5.15e-01 | 93.3% | 98.4% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 55.0 | 5.24e-01 | 100.0% | 79.7% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.69 | 59.0 | 5.02e-01 | 100.0% | 96.1% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.69 | 59.0 | 4.89e-01 | 95.6% | 73.4% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.68 | 61.0 | 4.56e-01 | 100.0% | 72.5% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 56.0 | 4.55e-01 | 100.0% | 50.0% |
| 1lujB01 | 1.10.10.490 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT | 0.67 | 50.0 | 4.73e-01 | 82.2% | 67.9% |
| 2lmgA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.66 | 55.0 | 4.80e-01 | 97.8% | 64.9% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.66 | 58.0 | 4.33e-01 | 97.8% | 45.0% |
| 2mpnA00 | 6.10.140.1340 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 53.0 | 4.80e-01 | 100.0% | 91.2% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.66 | 51.0 | 4.04e-01 | 91.1% | 47.6% |
| 1l3eB00 | 1.20.1020.10 | Mainly Alpha › Up-down Bundle › CREB-binding Protein; Chain A › TAZ domain | 0.65 | 54.0 | 4.26e-01 | 100.0% | 65.3% |
| 3wd6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 52.0 | 4.06e-01 | 100.0% | 39.0% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 50.0 | 4.42e-01 | 100.0% | 62.8% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.63 | 53.0 | 4.60e-01 | 100.0% | 73.0% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 50.0 | 4.46e-01 | 97.8% | 76.7% |
| 5tprA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.60 | 50.0 | 3.31e-01 | 100.0% | 20.8% |
| 4od8D00 | 6.10.140.1880 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 45.0 | 4.43e-01 | 95.6% | 88.2% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 48.0 | 3.79e-01 | 100.0% | 52.5% |
| 2k19A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 48.0 | 3.76e-01 | 100.0% | 85.7% |
| 1t33A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 46.0 | 3.28e-01 | 100.0% | 48.1% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.52 | 47.0 | 3.96e-01 | 100.0% | 86.5% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3306934 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.95 | 87.0 | 6.32e-01 | 100.0% | 40.9% |
| 4946837 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.94 | 88.0 | 5.87e-01 | 100.0% | 30.4% |
| 4177674 | 4992.1.1.23 ↗ | extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N | 0.94 | 86.0 | 6.25e-01 | 100.0% | 40.9% |
| 3450792 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.93 | 85.0 | 5.98e-01 | 100.0% | 36.0% |
| 4000148 | 605.2.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 | 0.93 | 85.0 | 6.48e-01 | 100.0% | 47.4% |
| 3873779 | 2004.1.1.463 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin, Kinesin_assoc, Microtub_bd | 0.92 | 79.0 | 4.49e-01 | 100.0% | 10.2% |
| 3864815 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.92 | 84.0 | 6.17e-01 | 100.0% | 41.7% |
| 2485668 | 7025.1.1.2 ↗ | alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9_C | 0.92 | 82.0 | 6.61e-01 | 100.0% | 53.6% |
| 3734558 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.91 | 82.0 | 4.32e-01 | 100.0% | 4.0% |
| 4015520 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.91 | 82.0 | 5.41e-01 | 100.0% | 27.3% |
| 3315624 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.91 | 81.0 | 5.97e-01 | 100.0% | 40.9% |
| 3587855 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.90 | 81.0 | 7.84e-01 | 100.0% | 90.0% |
| 3297061 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.90 | 80.0 | 5.87e-01 | 100.0% | 39.1% |
| 4209030 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.90 | 81.0 | 5.90e-01 | 100.0% | 39.5% |
| 4058767 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.90 | 80.0 | 5.55e-01 | 100.0% | 32.9% |
| 4026357 | 160.1.1.0 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0.90 | 81.0 | 5.46e-01 | 100.0% | 29.0% |
| 3840952 | 601.19.1.39 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › LIN9_C | 0.90 | 81.0 | 6.77e-01 | 100.0% | 97.3% |
| 3204414 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.90 | 81.0 | 4.67e-01 | 100.0% | 12.1% |
| 4023701 | 148.1.3.261 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small, AAA_lid_9 | 0.90 | 80.0 | 4.73e-01 | 100.0% | 15.0% |
| 3617789 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.90 | 80.0 | 5.05e-01 | 100.0% | 21.4% |
| 3754639 | 150.5.1.106 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › LIN9_C | 0.89 | 79.0 | 6.38e-01 | 100.0% | 52.9% |
| 3295653 | 4268.2.1.0 ↗ | alpha duplicates or obligate multimers › EspA/CesA-like › EspA chaperone CesA › EspA chaperone CesA | 0.89 | 79.0 | 5.75e-01 | 100.0% | 37.5% |
| 4130073 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.89 | 79.0 | 5.84e-01 | 100.0% | 40.9% |
| 4343661 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.88 | 78.0 | 5.74e-01 | 100.0% | 39.5% |
| 4493879 | 4992.1.1.23 ↗ | extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N | 0.88 | 79.0 | 5.84e-01 | 100.0% | 40.9% |
| 4964259 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.88 | 78.0 | 7.34e-01 | 100.0% | 81.8% |
| 3433915 | 109.4.1.148 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1 | 0.88 | 79.0 | 4.38e-01 | 100.0% | 8.8% |
| 4425053 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.87 | 77.0 | 4.27e-01 | 100.0% | 8.1% |
| 3310212 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.87 | 68.0 | 6.15e-01 | 84.4% | 75.0% |
| 4634964 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.87 | 75.0 | 5.66e-01 | 100.0% | 40.9% |
| 4605138 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.87 | 75.0 | 5.58e-01 | 100.0% | 39.1% |
| 3972084 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.86 | 76.0 | 5.48e-01 | 100.0% | 36.0% |
| 3477418 | 4992.1.1.12 ↗ | extended segments › RelB-like › RelB-like › RelB-like › LIN9_C | 0.86 | 75.0 | 5.89e-01 | 100.0% | 47.4% |
| 4124492 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.85 | 74.0 | 5.49e-01 | 100.0% | 39.1% |
| 5068844 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.85 | 73.0 | 5.80e-01 | 100.0% | 47.4% |
| 3363051 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.85 | 74.0 | 5.91e-01 | 100.0% | 65.6% |
| 4066056 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.84 | 73.0 | 5.41e-01 | 100.0% | 39.1% |
| 4137277 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.84 | 71.0 | 5.35e-01 | 100.0% | 39.1% |
| 5020645 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.83 | 73.0 | 4.39e-01 | 100.0% | 15.9% |
| 3191818 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.83 | 72.0 | 5.87e-01 | 100.0% | 52.9% |
| 4453306 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.83 | 71.0 | 5.31e-01 | 100.0% | 39.5% |
| 3398541 | 109.4.1.1492 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_SCC3-SA, PF31007 | 0.83 | 70.0 | 4.00e-01 | 100.0% | 10.2% |
| 3400028 | 3843.1.1.30 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › DUF4781 | 0.82 | 69.0 | 5.72e-01 | 100.0% | 54.1% |
| 3592036 | 3291.1.1.16 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Flagellar_rod | 0.82 | 72.0 | 4.61e-01 | 100.0% | 21.9% |
| 4396754 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.82 | 70.0 | 5.27e-01 | 100.0% | 39.1% |
| 3468553 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.81 | 71.0 | 4.88e-01 | 100.0% | 39.2% |
| 3600887 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.81 | 72.0 | 4.60e-01 | 100.0% | 22.4% |
| 3585354 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.81 | 71.0 | 5.69e-01 | 100.0% | 58.9% |
| 3179180 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.80 | 68.0 | 4.55e-01 | 100.0% | 24.9% |
| 3482539 | 192.8.1.288 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Ada3 | 0.80 | 68.0 | 5.32e-01 | 100.0% | 45.0% |
| 1879027 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.80 | 60.0 | 3.53e-01 | 100.0% | 10.0% |
| 4973477 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.79 | 68.0 | 5.49e-01 | 100.0% | 51.1% |
| 3287986 | 605.8.1.7 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › DUF6374 | 0.79 | 66.0 | 6.46e-01 | 100.0% | 98.0% |
| 4459223 | 605.1.1.162 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › COX4_pro | 0.78 | 66.0 | 5.24e-01 | 97.8% | 54.8% |
| None | — | 0.77 | 65.0 | 3.93e-01 | 100.0% | 15.4% | |
| 4980797 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.77 | 64.0 | 4.52e-01 | 100.0% | 60.0% |
| 4469296 | 3809.1.1.2 ↗ | alpha bundles › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Caudo_TAP | 0.76 | 63.0 | 5.47e-01 | 100.0% | 60.0% |
| 4116939 | 2004.1.1.525 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B | 0.76 | 65.0 | 3.70e-01 | 100.0% | 9.8% |
| 3611632 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.76 | 63.0 | 5.02e-01 | 100.0% | 45.0% |
| 3954540 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.75 | 65.0 | 4.96e-01 | 100.0% | 45.5% |
| 3260684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 59.0 | 5.70e-01 | 100.0% | 89.1% |
| 1290191 | 159.1.3.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › putative NTP pyrophosphohydrolase Exig_1061 › PRA-PH | 0.72 | 61.0 | 4.33e-01 | 100.0% | 31.1% |
| 4522608 | 3812.1.1.15 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › COX4_pro | 0.72 | 56.0 | 4.57e-01 | 88.9% | 61.1% |
| 3686172 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.71 | 56.0 | 3.17e-01 | 100.0% | 10.2% |
| 4323650 | 2004.1.1.45 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V | 0.68 | 61.0 | 3.65e-01 | 100.0% | 16.7% |
| 5039692 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 55.0 | 4.36e-01 | 91.1% | 48.4% |
| 3628378 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.68 | 59.0 | 4.02e-01 | 100.0% | 29.7% |
| 4216245 | 4082.1.1.1 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange | 0.66 | 50.0 | 5.03e-01 | 86.7% | 86.7% |
| 3210948 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.65 | 52.0 | 4.54e-01 | 100.0% | 57.5% |
| 4009690 | 7523.1.1.25 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Phosphonate-bd | 0.64 | 51.0 | 3.51e-01 | 100.0% | 23.6% |
| 3942444 | 5058.1.1.4 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › COX4_pro | 0.59 | 47.0 | 3.97e-01 | 100.0% | 51.1% |
| 4005270 | 3718.1.1.15 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › COX4_pro | 0.58 | 46.0 | 3.85e-01 | 100.0% | 48.4% |
| 3967901 | 192.15.1.91 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › COX4_pro | 0.57 | 44.0 | 3.79e-01 | 100.0% | 52.2% |