←Back to structures
FN667788.1__CBJ93912.1__CPT_0103__00103
Bact-VirFN667788.1__CBJ93912.1__CPT_0103__00103
Identity
- Accession:
- FN667788 ↗
- Kingdom:
- phage
Quality
75.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Firehammervirus›
Campylobacter_phage_CP220
TaxID: 2994044
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 386-503
Domain cluster:
rep: SRR1747055_scaffold_2_prodigal-single.1__X__X__00342__D202-325
D2
medium
residues 11-101
Domain cluster:
rep: MT740307.1__QNR53876.1__phiK7A1_088__00086__D24-103
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02839.20 best | CBM_5_12 | 27.0 | 5.00e-06 | 44.0% | 97.7% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.68 | 49.0 | 5.47e-01 | 92.3% | 94.5% |
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.58 | 44.0 | 4.40e-01 | 80.2% | 91.6% |
| 1llaA03 | 1.10.1280.10 | Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase | 0.54 | 42.0 | 3.11e-01 | 86.8% | 98.8% |
| 2p5yA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.53 | 32.0 | 3.00e-01 | 74.7% | 49.5% |
| 3bujA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 47.0 | 3.09e-01 | 100.0% | 47.1% |
| 2i7xA02 | 3.40.50.10890 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 37.0 | 2.93e-01 | 74.7% | 58.0% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.64e-01 | 80.2% | 76.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1291025 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.68 | 49.0 | 5.47e-01 | 92.3% | 94.5% |
| 4525425 | 146.1.1.3 ↗ | alpha arrays › Di-copper centre-containing domain › Di-copper centre-containing domain › Di-copper centre-containing domain › Hemocyanin_M | 0.59 | 47.0 | 3.41e-01 | 87.9% | 98.9% |
| 3281773 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.58 | 43.0 | 2.70e-01 | 78.0% | 21.7% |
| 3679395 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.56 | 42.0 | 3.10e-01 | 78.0% | 81.3% |