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FN667788.1__CBJ93942.1__CPT_0133__00133
Bact-VirFN667788.1__CBJ93942.1__CPT_0133__00133
Identity
- Accession:
- FN667788 ↗
- Kingdom:
- phage
Quality
75.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Firehammervirus›
Campylobacter_phage_CP220
TaxID: 2994044
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-81
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hz8A00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.80 | 58.0 | 4.97e-01 | 76.7% | 49.6% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.76 | 58.0 | 5.83e-01 | 82.2% | 87.8% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.75 | 57.0 | 5.69e-01 | 82.2% | 86.5% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.73 | 50.0 | 4.77e-01 | 72.6% | 62.1% |
| 3zgxA02 | 6.10.140.1720 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 56.0 | 5.24e-01 | 86.3% | 89.0% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 51.0 | 4.67e-01 | 76.7% | 66.0% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 50.0 | 5.15e-01 | 76.7% | 87.3% |
| 3nkzA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.69 | 53.0 | 4.84e-01 | 82.2% | 68.0% |
| 2jdiG01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.69 | 49.0 | 5.26e-01 | 75.3% | 98.4% |
| 2yb5F01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.68 | 46.0 | 4.42e-01 | 71.2% | 61.6% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 50.0 | 5.34e-01 | 80.8% | 100.0% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 52.0 | 5.34e-01 | 86.3% | 97.2% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.67 | 53.0 | 5.50e-01 | 87.7% | 97.0% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 52.0 | 5.39e-01 | 91.8% | 100.0% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.63 | 44.0 | 4.79e-01 | 72.6% | 91.4% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.63 | 43.0 | 4.38e-01 | 71.2% | 74.3% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 47.0 | 4.23e-01 | 86.3% | 64.5% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 48.0 | 4.50e-01 | 100.0% | 74.5% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3221478 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.72 | 53.0 | 4.76e-01 | 78.1% | 65.0% |
| 3371182 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.71 | 49.0 | 4.37e-01 | 80.8% | 50.5% |
| 3391978 | 3812.1.1.0 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE | 0.70 | 53.0 | 5.35e-01 | 83.6% | 84.0% |
| 5053329 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.69 | 51.0 | 4.38e-01 | 79.5% | 49.2% |
| 4993526 | 101.11.1.13 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › EMC6_arch | 0.69 | 51.0 | 4.84e-01 | 86.3% | 65.9% |
| 3213282 | 616.1.1.21 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF4473 | 0.68 | 49.0 | 4.91e-01 | 76.7% | 76.0% |
| 3520009 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.67 | 53.0 | 5.18e-01 | 86.3% | 100.0% |
| 3290879 | 3922.1.1.155 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF4349 | 0.66 | 52.0 | 5.28e-01 | 86.3% | 95.7% |
| 3657595 | 3826.1.1.30 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF3755 | 0.66 | 47.0 | 4.58e-01 | 80.8% | 68.8% |
| 4620002 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.65 | 47.0 | 4.51e-01 | 78.1% | 80.0% |
| 3699098 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.64 | 54.0 | 5.33e-01 | 95.9% | 91.3% |
| 5001217 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 51.0 | 5.13e-01 | 90.4% | 86.7% |
| 3737505 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.63 | 52.0 | 5.20e-01 | 91.8% | 96.0% |
| 5026881 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.63 | 53.0 | 5.34e-01 | 95.9% | 96.0% |
| 4062183 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.63 | 53.0 | 5.33e-01 | 95.9% | 94.7% |
| 4024277 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 52.0 | 5.22e-01 | 95.9% | 96.0% |
| 3619435 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.62 | 50.0 | 4.69e-01 | 91.8% | 71.6% |
| 4219218 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.62 | 50.0 | 4.43e-01 | 90.4% | 64.5% |
| 3627873 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.61 | 51.0 | 5.08e-01 | 100.0% | 93.3% |
| 5050139 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.61 | 51.0 | 5.15e-01 | 95.9% | 94.7% |
| 3940087 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.59 | 49.0 | 4.85e-01 | 95.9% | 91.3% |
| 2075294 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.58 | 49.0 | 4.54e-01 | 100.0% | 73.7% |
| 3762384 | 601.16.1.9 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › PF31076 | 0.57 | 48.0 | 3.93e-01 | 97.3% | 89.0% |