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FN667788.1__CBJ93973.1__CPT_0164__00164
Bact-VirFN667788.1__CBJ93973.1__CPT_0164__00164
Identity
- Accession:
- FN667788 ↗
- Kingdom:
- phage
Quality
95.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Firehammervirus›
Campylobacter_phage_CP220
TaxID: 2994044
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-22_94-181
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8idpB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 59.0 | 4.22e-01 | 100.0% | 89.8% |
| 8b3yA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 58.0 | 4.21e-01 | 98.2% | 91.8% |
| 1asuA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.65 | 48.0 | 4.15e-01 | 76.4% | 62.3% |
| 8d88A01 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.63 | 56.0 | 4.32e-01 | 99.1% | 94.1% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 56.0 | 4.54e-01 | 98.2% | 77.7% |
| 4dnhA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 54.0 | 3.71e-01 | 96.4% | 72.8% |
| 3zssA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 54.0 | 3.83e-01 | 100.0% | 84.2% |
| 3ug7C00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 53.0 | 3.89e-01 | 95.5% | 92.7% |
| 3cqjA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.61 | 53.0 | 4.07e-01 | 100.0% | 94.2% |
| 5tnvA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.61 | 53.0 | 3.94e-01 | 100.0% | 93.1% |
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 44.0 | 3.90e-01 | 75.5% | 81.9% |
| 1mxsA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 54.0 | 4.33e-01 | 100.0% | 87.0% |
| 1vhcF00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 53.0 | 4.28e-01 | 100.0% | 84.0% |
| 1b4eA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 51.0 | 3.76e-01 | 100.0% | 79.9% |
| 6n8eA04 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 43.0 | 3.41e-01 | 79.1% | 93.4% |
| 1jqdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 42.0 | 3.14e-01 | 80.0% | 29.4% |
| 2acvA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 41.0 | 3.11e-01 | 76.4% | 39.0% |
| 4mp8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 42.0 | 3.56e-01 | 77.3% | 51.4% |
| 1sazA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 46.0 | 3.85e-01 | 90.9% | 88.3% |
| 4mdaA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 50.0 | 4.10e-01 | 100.0% | 93.5% |
| 1vbkA03 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 41.0 | 3.90e-01 | 79.1% | 97.0% |
| 2iw3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.67e-01 | 92.7% | 82.8% |
| 2itmB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 47.0 | 3.76e-01 | 97.3% | 77.8% |
| 4ifeA02 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.54 | 46.0 | 3.63e-01 | 92.7% | 55.9% |
| 2wj6A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 46.0 | 3.74e-01 | 92.7% | 91.7% |
| 3jzmA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 48.0 | 3.72e-01 | 100.0% | 80.2% |
| 3f2kB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 48.0 | 4.08e-01 | 99.1% | 91.3% |
| 4tl8F00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 45.0 | 3.63e-01 | 91.8% | 77.5% |
| 1yt8A02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.53 | 44.0 | 4.50e-01 | 99.1% | 91.7% |
| 4ex6A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.53 | 37.0 | 3.43e-01 | 78.2% | 53.3% |
| 5uzxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 3.53e-01 | 92.7% | 82.7% |
| 6bk0A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 46.0 | 3.54e-01 | 97.3% | 86.4% |
| 1x7dA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 38.0 | 3.34e-01 | 77.3% | 52.4% |
| 3dmyA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.52 | 43.0 | 3.80e-01 | 91.8% | 85.3% |
| 3x0dA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 38.0 | 3.45e-01 | 78.2% | 70.9% |
| 2yhaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 46.0 | 4.27e-01 | 100.0% | 85.6% |
| 1ufvA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 40.0 | 3.54e-01 | 99.1% | 55.2% |
| 3ibtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 43.0 | 3.65e-01 | 95.5% | 81.3% |
| 1xm8A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 38.0 | 2.93e-01 | 80.0% | 55.1% |
| 2i7xA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 43.0 | 3.23e-01 | 93.6% | 97.5% |
| 1fuuB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 3.45e-01 | 93.6% | 86.6% |
| 2zwrB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 38.0 | 3.12e-01 | 80.0% | 82.1% |
| 1yt8A04 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.50 | 39.0 | 4.02e-01 | 99.1% | 88.8% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3689980 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.79 | 55.0 | 4.29e-01 | 71.8% | 100.0% |
| 5019952 | 2002.3.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › DUF2334 | 0.77 | 59.0 | 4.74e-01 | 80.0% | 56.0% |
| 5031548 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.71 | 63.0 | 4.61e-01 | 92.7% | 63.0% |
| 4987917 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.70 | 65.0 | 4.97e-01 | 100.0% | 65.5% |
| 4975065 | 2002.3.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › DUF2334 | 0.70 | 60.0 | 4.45e-01 | 92.7% | 73.0% |
| 5028282 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.69 | 64.0 | 4.66e-01 | 100.0% | 58.9% |
| 5082189 | 7576.1.1.0 ↗ | a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain | 0.67 | 50.0 | 4.47e-01 | 79.1% | 100.0% |
| 3183015 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 49.0 | 4.54e-01 | 77.3% | 87.9% |
| 3210952 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 41.0 | 3.67e-01 | 77.3% | 45.2% |
| 3638395 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 45.0 | 5.20e-01 | 92.7% | 100.0% |
| 3283209 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 46.0 | 4.71e-01 | 75.5% | 98.1% |
| 3926417 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.62 | 45.0 | 3.99e-01 | 75.5% | 65.0% |
| 5022883 | 2002.1.1.112 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_114 | 0.62 | 55.0 | 4.05e-01 | 99.1% | 91.2% |
| 4264624 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.59 | 50.0 | 3.52e-01 | 93.6% | 72.7% |
| 4984720 | 2484.1.1.333 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1464 | 0.59 | 50.0 | 3.50e-01 | 94.5% | 85.8% |
| 3462514 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.58 | 48.0 | 4.05e-01 | 88.2% | 64.4% |
| 3830852 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.58 | 50.0 | 3.67e-01 | 94.5% | 92.7% |
| 5017867 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.58 | 41.0 | 3.57e-01 | 72.7% | 71.0% |
| 4997517 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.58 | 49.0 | 3.76e-01 | 94.5% | 95.5% |
| 3672736 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.57 | 46.0 | 3.97e-01 | 87.3% | 65.1% |
| 5079358 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.57 | 50.0 | 3.83e-01 | 96.4% | 76.7% |
| 3269597 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.57 | 45.0 | 4.21e-01 | 94.5% | 67.9% |
| 3462300 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.57 | 36.0 | 3.41e-01 | 76.4% | 53.1% |
| 3520429 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.56 | 46.0 | 3.98e-01 | 88.2% | 65.7% |
| 3924869 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 46.0 | 3.99e-01 | 88.2% | 62.9% |
| 3216765 | 2484.1.1.297 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3, PF29688 | 0.56 | 44.0 | 3.78e-01 | 83.6% | 58.3% |
| 4255352 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.56 | 48.0 | 3.87e-01 | 96.4% | 84.6% |
| 3939156 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.56 | 43.0 | 3.58e-01 | 82.7% | 55.4% |
| 4028474 | 247.1.1.44 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, RMMBL, Lactamase_B_6 | 0.55 | 47.0 | 3.35e-01 | 95.5% | 83.6% |
| 3926535 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.55 | 44.0 | 4.26e-01 | 85.5% | 84.0% |
| 3282818 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 45.0 | 4.41e-01 | 94.5% | 81.7% |
| 3939083 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 42.0 | 3.68e-01 | 82.7% | 59.4% |
| 185388 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.54 | 43.0 | 3.56e-01 | 86.4% | 98.5% |
| 4928272 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.54 | 35.0 | 3.21e-01 | 74.5% | 46.4% |
| 3937782 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.54 | 44.0 | 3.84e-01 | 87.3% | 63.0% |
| 3993571 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.54 | 48.0 | 4.23e-01 | 98.2% | 85.0% |
| 4083092 | 2005.1.1.21 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Pantoate_ligase | 0.54 | 44.0 | 3.76e-01 | 98.2% | 54.4% |
| 3592422 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 45.0 | 3.22e-01 | 95.5% | 75.4% |
| 4979221 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.53 | 46.0 | 3.65e-01 | 95.5% | 92.3% |
| 3424158 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.53 | 48.0 | 3.71e-01 | 98.2% | 94.2% |
| 4150748 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 43.0 | 3.80e-01 | 87.3% | 64.4% |
| 3740291 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.53 | 44.0 | 3.52e-01 | 92.7% | 66.8% |
| 4299575 | 2005.1.1.21 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Pantoate_ligase | 0.52 | 44.0 | 3.77e-01 | 98.2% | 56.1% |
| 4460785 | 2006.1.1.39 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › DUF2608 | 0.52 | 44.0 | 3.32e-01 | 90.9% | 84.5% |
| 4412868 | 2005.1.1.21 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Pantoate_ligase | 0.52 | 45.0 | 3.77e-01 | 98.2% | 54.7% |
| 3935131 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.52 | 45.0 | 3.90e-01 | 94.5% | 61.8% |
| 429078 | 7512.1.1.27 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › O-FucT | 0.52 | 43.0 | 3.64e-01 | 90.0% | 69.8% |
| 4259515 | 2005.1.1.21 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Pantoate_ligase | 0.52 | 44.0 | 3.65e-01 | 98.2% | 52.3% |
| 4943774 | 2484.1.1.94 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C_2 | 0.52 | 44.0 | 4.34e-01 | 93.6% | 98.3% |
| 4194158 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.52 | 44.0 | 4.12e-01 | 95.5% | 79.3% |
| 3609439 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.52 | 46.0 | 3.93e-01 | 98.2% | 87.8% |
| 4285791 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.51 | 43.0 | 3.35e-01 | 91.8% | 80.8% |
| 3458229 | 2005.1.1.21 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Pantoate_ligase | 0.51 | 46.0 | 3.75e-01 | 99.1% | 60.0% |
| 3699846 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.51 | 45.0 | 3.83e-01 | 98.2% | 86.7% |
| 3700367 | 2003.1.5.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 | 0.51 | 42.0 | 2.81e-01 | 90.0% | 47.1% |
| 3626065 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.50 | 41.0 | 2.74e-01 | 90.9% | 60.4% |
D2
medium
residues 23-93
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yk4A01 | 3.30.370.20 | Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › | 0.65 | 41.0 | 3.95e-01 | 98.6% | 56.1% |
| 1booA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 36.0 | 2.43e-01 | 100.0% | 14.2% |
| 1txgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 43.0 | 3.16e-01 | 74.6% | 46.7% |
| 1iugA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 39.0 | 2.72e-01 | 73.2% | 28.3% |
| 2culA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 45.0 | 3.20e-01 | 88.7% | 88.4% |
| 3u7vA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 42.0 | 2.71e-01 | 100.0% | 16.6% |
| 2g17A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 38.0 | 2.89e-01 | 76.1% | 48.6% |
| 4a0gD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 38.0 | 2.63e-01 | 100.0% | 20.4% |
| 4xr9B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 40.0 | 2.91e-01 | 81.7% | 48.8% |
| 2y0cB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 40.0 | 2.93e-01 | 81.7% | 46.5% |
| 1dgmA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 41.0 | 2.88e-01 | 90.1% | 47.1% |
| 3ujpB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 38.0 | 3.16e-01 | 83.1% | 39.2% |
| 3ojoA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 39.0 | 2.85e-01 | 78.9% | 47.4% |
| 1ozhB03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.52 | 42.0 | 3.15e-01 | 100.0% | 33.7% |
| 5vyqA01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.52 | 36.0 | 2.80e-01 | 74.6% | 53.7% |
| 3ktdC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 35.0 | 2.54e-01 | 71.8% | 32.5% |
| 4uopA02 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.51 | 37.0 | 2.48e-01 | 77.5% | 92.0% |
| 2fa8B00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 36.0 | 3.43e-01 | 74.6% | 73.6% |
| 2blnA01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.51 | 39.0 | 2.86e-01 | 83.1% | 100.0% |
| 3busB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 44.0 | 3.06e-01 | 100.0% | 29.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3201759 | 2003.1.3.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FMO-like | 0.56 | 45.0 | 2.79e-01 | 87.3% | 88.0% |
| 3286442 | 2003.1.1.45 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N | 0.53 | 39.0 | 2.79e-01 | 78.9% | 47.1% |
| 4088622 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.52 | 37.0 | 2.73e-01 | 77.5% | 100.0% |
| 3311160 | 2003.1.1.70 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N_2 | 0.52 | 43.0 | 3.32e-01 | 94.4% | 96.0% |
| 3955919 | 2003.1.3.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 | 0.52 | 45.0 | 3.11e-01 | 97.2% | 83.6% |
| 4980052 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.52 | 40.0 | 2.73e-01 | 87.3% | 61.4% |
| 5039765 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.52 | 42.0 | 2.80e-01 | 90.1% | 73.4% |
| 3362809 | 7591.1.1.1 ↗ | a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK | 0.51 | 35.0 | 3.06e-01 | 73.2% | 65.2% |
| 3601565 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.50 | 37.0 | 3.24e-01 | 81.7% | 70.8% |