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FP25K

Euk-Vir

Euproctis_pseudoconspersa_nucleopolyhedrovirus

FP25K__YP_002854640__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467

Identity

Accession:
YP_002854640 ↗
Protein ID:
FP25K
Kingdom:
euk

Quality

76.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Euproctis_pseudoconspersa_nucleopolyhedrovirus

TaxID: 307467

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-130
PDB
Domain cluster: rep: FP__YP_003422485__Pseudalatia_unipuncta_granulovirus__36355__D5-69
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03258.21 best Baculo_FP 96.4 1.30e-27 100.0% 97.7%
D2 medium residues 133-200
PDB
Domain cluster: rep: FP25K__YP_009330236__Plodia_interpunctella_granulovirus__262175__D95-146
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25298.2 best Baculo_FP_2nd 71.2 6.30e-20 76.5% 96.2%
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4uoyA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.73 61.0 4.47e-01 97.1% 50.5%
3nx3A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.73 57.0 4.54e-01 86.8% 63.8%
1ohvA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.71 55.0 4.19e-01 85.3% 54.8%
2pb2B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.70 53.0 4.20e-01 82.4% 66.2%
3i4jB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.68 56.0 4.52e-01 92.6% 65.7%
4l7nA01 1.20.142.10 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain 0.66 49.0 3.82e-01 77.9% 48.3%
1zodA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.66 53.0 4.31e-01 92.6% 75.9%
2lpuA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.66 50.0 3.99e-01 85.3% 95.9%
5yrzA01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 47.0 4.10e-01 76.5% 55.2%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 41.0 3.69e-01 75.0% 45.8%
2drvA00 3.30.1960.10 Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like 0.65 47.0 3.39e-01 76.5% 66.0%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 46.0 3.46e-01 75.0% 39.4%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.63 51.0 3.15e-01 86.8% 20.7%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 42.0 3.68e-01 70.6% 45.0%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 45.0 4.19e-01 77.9% 59.6%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.62 47.0 3.77e-01 82.4% 73.9%
3isxA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.62 51.0 3.56e-01 95.6% 92.3%
6sc4A00 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.61 45.0 3.29e-01 77.9% 53.7%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 40.0 3.55e-01 72.1% 45.6%
3zm6A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.60 39.0 2.71e-01 85.3% 20.2%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 42.0 3.73e-01 76.5% 51.9%
3r1wA00 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.59 43.0 3.14e-01 77.9% 52.8%
3ewgA00 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.58 41.0 3.88e-01 73.5% 62.5%
3gv5B01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.57 43.0 3.40e-01 82.4% 40.2%
2js3A01 1.10.287.780 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ITPase-like domains 0.56 33.0 3.22e-01 97.1% 52.6%
2pa8D01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.55 49.0 4.51e-01 98.5% 90.9%
1xxaC00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.55 39.0 3.89e-01 77.9% 71.2%
6r8gB02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.55 40.0 3.00e-01 83.8% 31.2%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 40.0 3.96e-01 82.4% 76.1%
2j0nB00 1.20.1710.10 Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like 0.53 45.0 3.29e-01 94.1% 62.0%
3v3kD00 1.20.1260.90 Mainly Alpha › Up-down Bundle › Ferritin › 0.53 43.0 3.20e-01 86.8% 62.2%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 37.0 3.34e-01 76.5% 64.8%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 36.0 3.18e-01 72.1% 58.7%
3mahA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 36.0 3.66e-01 73.5% 81.2%
1vx7H01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.52 45.0 4.16e-01 95.6% 100.0%
4a17E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.51 44.0 4.13e-01 97.1% 100.0%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3928803 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.72 59.0 4.19e-01 89.7% 34.5%
4462924 7577.1.1.2 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 0.72 55.0 3.36e-01 85.3% 20.2%
4498125 3016.1.1.2 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.71 59.0 4.84e-01 94.1% 73.1%
3515993 220.1.1.13 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.71 44.0 3.59e-01 75.0% 35.8%
3949260 4120.1.1.0 ↗ few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.69 48.0 4.10e-01 79.4% 45.5%
3706686 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.68 43.0 4.45e-01 75.0% 67.7%
3250819 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.68 46.0 3.65e-01 72.1% 44.1%
3516025 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 47.0 4.16e-01 75.0% 54.3%
3578693 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.67 47.0 3.59e-01 73.5% 33.8%
3476418 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 47.0 3.82e-01 75.0% 38.5%
3388895 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.67 42.0 3.53e-01 75.0% 39.1%
3940847 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.67 46.0 3.95e-01 76.5% 44.5%
3224950 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 47.0 4.09e-01 76.5% 48.6%
3887088 4070.1.1.0 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.65 47.0 3.40e-01 76.5% 33.2%
3838957 3439.1.1.0 ↗ a+b two layers › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain 0.65 50.0 4.98e-01 85.3% 95.7%
5081361 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 45.0 3.95e-01 75.0% 49.0%
3741445 241.4.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 0.65 50.0 4.50e-01 86.8% 80.0%
3165355 206.1.1.17 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo 0.64 46.0 3.16e-01 76.5% 29.2%
3533574 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 44.0 3.53e-01 73.5% 36.6%
3414272 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.63 38.0 3.40e-01 72.1% 43.2%
3510148 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 43.0 3.49e-01 73.5% 36.9%
3611878 314.1.1.12 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.63 51.0 3.49e-01 92.6% 35.8%
4202176 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.63 42.0 3.12e-01 72.1% 25.3%
5061231 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.62 43.0 4.48e-01 72.1% 83.3%
3365178 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.62 50.0 5.09e-01 92.6% 95.4%
4225185 220.1.1.154 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_EXO84 0.62 44.0 3.37e-01 75.0% 31.8%
3972746 306.6.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › CT_C_D 0.62 43.0 4.06e-01 73.5% 61.3%
5015133 4100.1.1.9 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 0.61 41.0 4.30e-01 70.6% 81.7%
3931122 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 42.0 3.83e-01 73.5% 52.6%
5020788 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.59 40.0 4.14e-01 75.0% 75.4%
3882796 1021.1.1.2 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD 0.59 41.0 3.89e-01 75.0% 60.0%
3403609 247.1.1.38 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.59 40.0 3.84e-01 70.6% 60.8%
3620293 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 3.95e-01 92.6% 57.7%
4972215 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.58 42.0 2.95e-01 76.5% 25.7%
3186404 3441.1.1.2 ↗ alpha bundles › Bc28.1 › Bc28.1 › Bc28.1 › Pescadillo_N 0.57 46.0 3.68e-01 89.7% 65.7%
4969162 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.57 39.0 4.11e-01 75.0% 83.3%
4929483 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.57 45.0 3.84e-01 97.1% 51.7%
3344139 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 40.0 4.34e-01 79.4% 94.5%
4952130 3714.1.1.1 ↗ a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical 0.56 41.0 2.83e-01 77.9% 25.7%
3483955 386.1.1.6 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 0.56 42.0 3.87e-01 79.4% 76.5%
3893875 386.1.1.64 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_12 0.55 46.0 4.36e-01 91.2% 91.3%
4028520 192.4.1.34 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Pescadillo_N 0.55 47.0 3.67e-01 95.6% 62.7%
3971560 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.55 38.0 3.94e-01 75.0% 93.8%
3588365 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 35.0 3.34e-01 80.9% 52.9%
4997639 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 46.0 3.91e-01 91.2% 77.1%
2834165 3740.1.1.1 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C 0.53 47.0 3.09e-01 97.1% 92.7%
4032017 2004.1.1.301 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 0.52 42.0 2.52e-01 92.6% 14.7%
3675412 386.1.1.6 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 0.52 37.0 3.58e-01 77.9% 67.5%
3523516 5063.1.1.11 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › TSTD2_N 0.52 34.0 3.40e-01 73.5% 64.3%
4163139 304.48.1.10 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS 0.52 45.0 3.58e-01 94.1% 67.7%
4590724 3291.1.1.163 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Pescadillo_N 0.52 37.0 2.95e-01 76.5% 51.7%
4992898 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.52 45.0 2.97e-01 97.1% 87.2%
4024657 109.4.1.235 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 0.52 46.0 2.70e-01 100.0% 52.6%
None — 0.51 38.0 2.82e-01 82.4% 36.9%
4531300 327.19.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.51 38.0 3.64e-01 85.3% 83.5%
5044090 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.50 44.0 3.36e-01 98.5% 44.4%