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FR671406.1__CBW39012.1__X__00045
Bact-VirFR671406.1__CBW39012.1__X__00045
Identity
- Accession:
- FR671406 ↗
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Taxonomy
TaxID: 870470
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 69-111
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u78A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 6.14e-01 | 100.0% | 91.1% |
| 6vhyA02 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.74 | 62.0 | 5.46e-01 | 100.0% | 88.2% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 60.0 | 5.24e-01 | 100.0% | 60.3% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 60.0 | 5.12e-01 | 100.0% | 60.0% |
| 1h99A01 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.70 | 56.0 | 4.39e-01 | 95.3% | 89.4% |
| 4etsA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 58.0 | 4.73e-01 | 100.0% | 72.4% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 4.79e-01 | 100.0% | 70.7% |
| 3gz5B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 55.0 | 4.69e-01 | 93.0% | 55.4% |
| 2b4lA02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.67 | 57.0 | 3.94e-01 | 100.0% | 83.4% |
| 3me5A01 | 1.10.260.140 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.67 | 53.0 | 4.73e-01 | 90.7% | 60.9% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 54.0 | 4.42e-01 | 100.0% | 46.7% |
| 2hzdA00 | 6.10.20.40 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain | 0.66 | 54.0 | 4.56e-01 | 100.0% | 70.7% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.40e-01 | 100.0% | 54.4% |
| 4dccA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 51.0 | 4.48e-01 | 100.0% | 83.8% |
| 3ol4A02 | 1.10.10.2390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 50.0 | 4.71e-01 | 100.0% | 86.7% |
| 2b0cA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 49.0 | 4.48e-01 | 100.0% | 71.2% |
| 2ly1A03 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.61 | 48.0 | 4.16e-01 | 100.0% | 59.3% |
| 3jyoA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.61 | 52.0 | 3.72e-01 | 100.0% | 97.8% |
| 3eoqB02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.61 | 48.0 | 3.35e-01 | 100.0% | 77.0% |
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 48.0 | 4.51e-01 | 100.0% | 91.4% |
| 2eggB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.58 | 50.0 | 3.46e-01 | 100.0% | 78.0% |
| 3b0pA02 | 1.20.120.1460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 45.0 | 3.97e-01 | 97.7% | 74.7% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.58 | 48.0 | 3.32e-01 | 100.0% | 56.7% |
| 3uo9C01 | 1.10.238.210 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.56 | 43.0 | 3.72e-01 | 93.0% | 80.5% |
| 3r0vA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 40.0 | 2.58e-01 | 93.0% | 58.0% |
| 4q6bA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 42.0 | 2.84e-01 | 100.0% | 73.6% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.51 | 39.0 | 3.10e-01 | 93.0% | 80.4% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3442072 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.93 | 86.0 | 5.96e-01 | 100.0% | 44.8% |
| 3335282 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.93 | 82.0 | 7.45e-01 | 95.3% | 100.0% |
| 3421266 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 86.0 | 6.02e-01 | 100.0% | 46.7% |
| 3646654 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 86.0 | 6.00e-01 | 100.0% | 46.7% |
| 3420021 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.90 | 81.0 | 5.69e-01 | 100.0% | 45.6% |
| 3909922 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.90 | 80.0 | 7.62e-01 | 100.0% | 92.0% |
| 3198858 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 80.0 | 6.74e-01 | 100.0% | 65.7% |
| 3200422 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 80.0 | 5.93e-01 | 100.0% | 52.4% |
| 3908865 | 101.1.2.536 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 | 0.90 | 79.0 | 7.33e-01 | 100.0% | 83.6% |
| 3680460 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.90 | 81.0 | 6.48e-01 | 100.0% | 71.2% |
| 5052263 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 80.0 | 6.61e-01 | 100.0% | 58.7% |
| 4979322 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.90 | 81.0 | 6.78e-01 | 100.0% | 65.7% |
| 4014657 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 78.0 | 7.25e-01 | 100.0% | 80.0% |
| 3224103 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 79.0 | 5.58e-01 | 100.0% | 51.2% |
| 3715279 | 101.1.1.276 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding, Myb_DNA-bind_6 | 0.88 | 78.0 | 5.06e-01 | 100.0% | 25.0% |
| 3805561 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.88 | 78.0 | 5.54e-01 | 100.0% | 45.6% |
| 3730184 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.88 | 79.0 | 7.24e-01 | 100.0% | 81.8% |
| 3712226 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.88 | 78.0 | 5.96e-01 | 100.0% | 47.4% |
| 3609939 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.88 | 78.0 | 5.78e-01 | 100.0% | 42.9% |
| 3203378 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 76.0 | 6.64e-01 | 100.0% | 70.8% |
| 3597185 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 76.0 | 5.99e-01 | 100.0% | 61.4% |
| 3636036 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 73.0 | 6.66e-01 | 100.0% | 75.0% |
| 3684956 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.85 | 74.0 | 6.46e-01 | 100.0% | 67.7% |
| 4215069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 74.0 | 5.81e-01 | 100.0% | 48.9% |
| 3450546 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 77.0 | 5.50e-01 | 100.0% | 47.5% |
| 3933926 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 75.0 | 6.52e-01 | 100.0% | 70.8% |
| 3962579 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 72.0 | 5.03e-01 | 100.0% | 53.6% |
| 5083383 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 74.0 | 6.63e-01 | 100.0% | 76.7% |
| 3487537 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 72.0 | 6.94e-01 | 100.0% | 88.0% |
| 5065250 | 4156.1.1.7 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DUF5814 | 0.84 | 73.0 | 5.12e-01 | 100.0% | 32.6% |
| 2393452 | 101.43.1.1 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain › TerS_N | 0.84 | 73.0 | 6.70e-01 | 100.0% | 78.6% |
| 3740014 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 71.0 | 6.15e-01 | 100.0% | 62.9% |
| 4105352 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.84 | 74.0 | 4.46e-01 | 100.0% | 16.1% |
| 4190132 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 71.0 | 6.85e-01 | 97.7% | 90.0% |
| 4053154 | 101.1.1.16 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_WhiA | 0.83 | 73.0 | 6.41e-01 | 100.0% | 70.8% |
| 4927588 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 72.0 | 6.03e-01 | 100.0% | 58.7% |
| 4926838 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.83 | 71.0 | 6.29e-01 | 100.0% | 67.7% |
| 3958858 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.83 | 72.0 | 5.11e-01 | 100.0% | 89.2% |
| 3723123 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 69.0 | 6.32e-01 | 100.0% | 75.0% |
| 3618803 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 72.0 | 6.45e-01 | 100.0% | 76.7% |
| 3191996 | 101.1.2.480 ↗ | alpha arrays › HTH › HTH › winged helix domain › Clr5 | 0.82 | 70.0 | 6.51e-01 | 100.0% | 78.2% |
| 5013811 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 71.0 | 6.60e-01 | 100.0% | 80.0% |
| 3958865 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.81 | 69.0 | 6.47e-01 | 100.0% | 78.2% |
| 5023957 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.81 | 71.0 | 5.80e-01 | 100.0% | 58.7% |
| 5006610 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 68.0 | 6.10e-01 | 100.0% | 68.3% |
| 2491473 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 69.0 | 5.50e-01 | 100.0% | 51.6% |
| 4014609 | 101.1.1.79 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N | 0.81 | 68.0 | 6.07e-01 | 100.0% | 72.3% |
| 5079851 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 67.0 | 6.14e-01 | 100.0% | 73.3% |
| 5053360 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 68.0 | 5.51e-01 | 100.0% | 52.9% |
| 5070167 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 69.0 | 6.44e-01 | 100.0% | 81.8% |
| 5049118 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 66.0 | 5.92e-01 | 100.0% | 69.2% |
| 3506369 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.79 | 69.0 | 4.12e-01 | 100.0% | 14.1% |
| 3621586 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 66.0 | 6.17e-01 | 95.3% | 78.2% |
| 4971686 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.79 | 67.0 | 5.14e-01 | 100.0% | 42.9% |
| 5028095 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.79 | 67.0 | 5.13e-01 | 100.0% | 41.9% |
| 4941699 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 69.0 | 5.75e-01 | 100.0% | 58.7% |
| 4596907 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 68.0 | 5.85e-01 | 100.0% | 62.9% |
| 3957333 | 101.43.1.2 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain › Transposase_mut | 0.79 | 67.0 | 6.16e-01 | 100.0% | 77.6% |
| 4274627 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.79 | 67.0 | 6.10e-01 | 100.0% | 73.3% |
| 3980764 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 67.0 | 6.64e-01 | 100.0% | 97.8% |
| 4958656 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.78 | 66.0 | 3.95e-01 | 95.3% | 13.9% |
| 4013698 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 65.0 | 5.82e-01 | 100.0% | 78.5% |
| 3232179 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 66.0 | 6.03e-01 | 100.0% | 85.0% |
| 3959683 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.78 | 65.0 | 3.86e-01 | 93.0% | 13.6% |
| 3350998 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 66.0 | 6.01e-01 | 100.0% | 80.0% |
| 5029224 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 66.0 | 6.00e-01 | 100.0% | 73.3% |
| 4966213 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 65.0 | 5.79e-01 | 100.0% | 70.8% |
| 4959187 | 101.1.2.489 ↗ | alpha arrays › HTH › HTH › winged helix domain › Transposase_mut | 0.78 | 66.0 | 6.39e-01 | 100.0% | 86.0% |
| 3910504 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 64.0 | 6.19e-01 | 100.0% | 88.0% |
| 3243611 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 66.0 | 6.39e-01 | 100.0% | 86.0% |
| 4029357 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 67.0 | 5.04e-01 | 100.0% | 91.4% |
| 5027917 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.77 | 65.0 | 4.09e-01 | 100.0% | 18.3% |
| 3961039 | 101.1.3.13 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut | 0.77 | 66.0 | 6.56e-01 | 100.0% | 95.6% |
| 5049604 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 65.0 | 6.12e-01 | 100.0% | 80.0% |
| 5035624 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.77 | 66.0 | 5.36e-01 | 100.0% | 54.1% |
| 3961415 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.77 | 65.0 | 3.92e-01 | 100.0% | 14.4% |
| 3960847 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.77 | 64.0 | 4.68e-01 | 100.0% | 33.8% |
| 3962597 | 101.1.3.13 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut | 0.77 | 65.0 | 5.76e-01 | 100.0% | 67.7% |
| 4979487 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 65.0 | 4.59e-01 | 100.0% | 35.0% |
| 5070907 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 63.0 | 6.24e-01 | 100.0% | 91.1% |
| 3957316 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.77 | 64.0 | 5.74e-01 | 100.0% | 67.7% |
| 3958338 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.77 | 65.0 | 6.45e-01 | 100.0% | 97.8% |
| 3958041 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 64.0 | 5.73e-01 | 100.0% | 67.7% |
| 4929815 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 63.0 | 5.64e-01 | 100.0% | 67.7% |
| 3450729 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 62.0 | 5.41e-01 | 100.0% | 67.1% |
| 4014593 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 61.0 | 5.71e-01 | 100.0% | 76.4% |
| 4026717 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 61.0 | 5.35e-01 | 100.0% | 65.7% |
| 5056734 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 61.0 | 4.59e-01 | 100.0% | 48.7% |
| 3724068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 58.0 | 5.52e-01 | 100.0% | 81.8% |
| 3225058 | 101.1.2.566 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C | 0.67 | 55.0 | 3.35e-01 | 100.0% | 15.4% |
| 3228613 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 54.0 | 4.21e-01 | 100.0% | 45.7% |
| 5028520 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.63 | 51.0 | 3.56e-01 | 100.0% | 31.4% |
| 3383900 | 108.1.1.1 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 | 0.59 | 51.0 | 4.22e-01 | 100.0% | 58.7% |
| 3611627 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.57 | 46.0 | 3.65e-01 | 100.0% | 68.6% |
| 3819443 | 108.1.1.96 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 | 0.56 | 46.0 | 3.80e-01 | 100.0% | 68.9% |
D2
high
residues 164-256
Domain cluster:
rep: SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00263__D119-214
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13392.13 best | HNH_3 | 56.8 | 1.80e-15 | 49.5% | 95.7% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.84 | 59.0 | 5.63e-01 | 72.0% | 65.1% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 34.0 | 3.44e-01 | 73.1% | 50.5% |
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.64 | 50.0 | 4.14e-01 | 82.8% | 53.7% |
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.59 | 53.0 | 4.64e-01 | 100.0% | 71.1% |
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.56 | 46.0 | 4.89e-01 | 92.5% | 100.0% |
| 3whkA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 31.0 | 3.52e-01 | 94.6% | 73.6% |
| 1te2A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 32.0 | 3.57e-01 | 96.8% | 76.4% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 40.0 | 2.83e-01 | 84.9% | 40.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.84 | 59.0 | 5.48e-01 | 73.1% | 60.9% |
| 3539740 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.82 | 60.0 | 5.37e-01 | 76.3% | 64.0% |
| 5053631 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.77 | 58.0 | 5.49e-01 | 79.6% | 90.0% |
| 4949181 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.62 | 47.0 | 5.21e-01 | 84.9% | 100.0% |
| 3695527 | 378.1.1.6 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon | 0.62 | 45.0 | 4.18e-01 | 77.4% | 68.3% |
| 4313114 | 378.1.1.30 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › PF30178 | 0.62 | 52.0 | 4.79e-01 | 91.4% | 80.0% |
| 3232045 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.59 | 41.0 | 4.24e-01 | 72.0% | 87.5% |
| 4607935 | 378.1.1.29 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › ICEA | 0.58 | 46.0 | 4.13e-01 | 84.9% | 88.5% |
| 2449258 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.57 | 45.0 | 3.71e-01 | 83.9% | 51.2% |