CBX88968.1

Arc-Vir

FR725450__CBX88968.1__X__00024

Identity

94.5 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Nitrososphaera_phage_Pro-Nvie1

TaxID: 927392

View cluster (20 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-69

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1hkqA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	42.0	3.44e-01	84.7%	100.0%
3c8uA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.55	44.0	3.15e-01	93.2%	60.7%
5k9fA00	3.30.70.100	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.52	46.0	3.84e-01	100.0%	89.3%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3783047	376.1.1.5 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP	0.62	48.0	3.76e-01	88.1%	95.0%
3268630	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.57	41.0	3.64e-01	81.4%	96.8%
3541208	101.1.1.230 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_CHD6-9	0.55	40.0	3.33e-01	78.0%	81.8%
4935477	2008.1.1.15 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N	0.53	43.0	2.98e-01	96.6%	61.7%
4588532	376.1.1.0 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box	0.51	34.0	3.19e-01	71.2%	100.0%
4564000	3273.1.1.7 ↗	alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › GDH_HM3	0.51	36.0	2.38e-01	78.0%	46.2%
3699926	304.51.1.0 ↗	a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related	0.50	41.0	3.35e-01	100.0%	93.8%

D2 medium residues 70-187

PDB

Domain cluster: rep: ON615601.1__UTS51982.1__X__00034__D5-121

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1nh2D02	2.30.18.10	Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain	0.62	27.0	4.08e-01	72.0%	100.0%
1ej8A00	2.60.40.200	Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain	0.60	46.0	4.35e-01	81.4%	94.3%
3d4eA02	3.30.1450.10	Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 ›	0.57	31.0	3.76e-01	74.6%	79.5%
3bgaA05	2.70.98.10	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 ›	0.54	46.0	3.59e-01	94.1%	94.4%
1d6uA03	2.70.98.20	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain	0.54	45.0	3.16e-01	93.2%	90.7%
1odhA01	2.20.25.670	Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain	0.54	27.0	3.24e-01	98.3%	74.6%
2nncA00	2.60.40.2470	Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain	0.53	36.0	3.77e-01	94.9%	76.4%
3qwnA02	2.60.40.2370	Mainly Beta › Sandwich › Immunoglobulin-like › NigD-like, C-terminal beta sandwich domain	0.52	38.0	3.72e-01	100.0%	68.7%
2d73A01	2.70.98.10	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 ›	0.52	45.0	3.39e-01	94.1%	88.4%
2eefA01	2.60.40.2440	Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain	0.51	39.0	3.90e-01	83.9%	85.0%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4928608	3899.1.1.0 ↗	beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8	1.00	96.0	8.43e-01	98.3%	73.0%
4932865	3899.1.1.0 ↗	beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8	0.93	88.0	8.18e-01	97.5%	87.9%
3536857	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.60	51.0	4.51e-01	91.5%	80.6%
5034526	11.1.4.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like	0.57	34.0	4.04e-01	79.7%	92.0%
3167778	11.1.3.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like	0.54	48.0	4.20e-01	96.6%	93.1%
4173923	1.1.5.33 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2	0.53	39.0	3.15e-01	82.2%	38.7%
4018682	1.1.5.10 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct	0.53	39.0	3.30e-01	79.7%	70.8%
3628368	10.10.1.1 ↗	beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT	0.51	40.0	3.93e-01	83.1%	100.0%