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FR751545.1__CBY88548.1__X__00017
Bact-VirFR751545.1__CBY88548.1__X__00017
Identity
- Accession:
- FR751545 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Waewaevirus›
Pantoea_phage_LIMEzero
TaxID: 943335
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-63
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8hmcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.78 | 50.0 | 3.05e-01 | 81.1% | 11.1% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.73 | 49.0 | 2.95e-01 | 81.1% | 11.9% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.72 | 53.0 | 4.09e-01 | 81.1% | 37.6% |
| 4upkA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.71 | 61.0 | 3.60e-01 | 100.0% | 26.3% |
| 1evjC02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.68 | 51.0 | 3.50e-01 | 81.1% | 70.2% |
| 2bolB02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 52.0 | 3.88e-01 | 84.9% | 64.8% |
| 1qhuA01 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.65 | 45.0 | 3.12e-01 | 81.1% | 21.3% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.65 | 54.0 | 3.76e-01 | 100.0% | 27.1% |
| 5kvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.65 | 48.0 | 3.41e-01 | 81.1% | 61.1% |
| 3ed4A02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.64 | 47.0 | 4.01e-01 | 81.1% | 49.4% |
| 4cc9A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 42.0 | 2.63e-01 | 81.1% | 12.1% |
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.63 | 42.0 | 4.08e-01 | 77.4% | 60.7% |
| 2kb3A01 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.63 | 52.0 | 4.09e-01 | 96.2% | 64.2% |
| 1oq1B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 47.0 | 3.21e-01 | 86.8% | 58.9% |
| 5hkeA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.62 | 53.0 | 3.34e-01 | 100.0% | 53.1% |
| 2lc1A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.61 | 50.0 | 4.20e-01 | 96.2% | 75.0% |
| 1ntvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 46.0 | 3.38e-01 | 83.0% | 50.0% |
| 3qcwA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 3.25e-01 | 86.8% | 53.3% |
| 5e50A01 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.61 | 51.0 | 4.23e-01 | 96.2% | 80.0% |
| 2jozA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 46.0 | 3.81e-01 | 83.0% | 47.9% |
| 1e88A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.60 | 42.0 | 4.51e-01 | 81.1% | 92.9% |
| 1jgtB01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.60 | 50.0 | 3.37e-01 | 94.3% | 47.8% |
| 1wlnA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.60 | 50.0 | 3.92e-01 | 96.2% | 70.8% |
| 5ff5A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 46.0 | 2.97e-01 | 84.9% | 44.0% |
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.59 | 50.0 | 3.31e-01 | 100.0% | 34.5% |
| 1hxnA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.59 | 40.0 | 2.71e-01 | 81.1% | 18.1% |
| 1r21A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.59 | 49.0 | 4.05e-01 | 96.2% | 79.0% |
| 2z15A00 | 3.90.640.90 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Anti-proliferative protein, N-terminal domain | 0.58 | 49.0 | 3.88e-01 | 98.1% | 90.8% |
| 4v0hD00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 43.0 | 2.90e-01 | 83.0% | 92.8% |
| 1boxA00 | 3.10.450.30 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases | 0.57 | 48.0 | 4.09e-01 | 100.0% | 82.1% |
| 3a7sA00 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.57 | 46.0 | 3.16e-01 | 92.5% | 67.2% |
| 5jciA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.55 | 41.0 | 3.50e-01 | 81.1% | 58.4% |
| 4wj7D00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 40.0 | 3.17e-01 | 79.2% | 59.3% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 42.0 | 2.68e-01 | 86.8% | 28.0% |
| 6hgcA01 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.55 | 44.0 | 3.11e-01 | 92.5% | 71.7% |
| 1xd3C00 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.55 | 44.0 | 2.99e-01 | 92.5% | 70.0% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 46.0 | 3.59e-01 | 100.0% | 55.8% |
| 1m3qA01 | 3.30.310.40 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.55 | 44.0 | 3.76e-01 | 90.6% | 70.8% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 47.0 | 3.53e-01 | 100.0% | 59.0% |
| 1twfI02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 42.0 | 3.89e-01 | 96.2% | 86.8% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.53 | 46.0 | 3.99e-01 | 98.1% | 92.8% |
| 2ojhA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 40.0 | 2.60e-01 | 83.0% | 23.5% |
| 3kljA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.53 | 39.0 | 3.43e-01 | 81.1% | 55.4% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 45.0 | 2.76e-01 | 94.3% | 90.2% |
| 1v89A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 39.0 | 3.07e-01 | 81.1% | 38.1% |
| 1k32A01 | 2.120.10.60 | Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain | 0.52 | 44.0 | 2.87e-01 | 100.0% | 94.5% |
| 3ottA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 2.84e-01 | 100.0% | 86.6% |
| 4lqzA00 | 2.40.128.570 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 | 0.52 | 43.0 | 3.25e-01 | 94.3% | 64.9% |
| 4j4hA01 | 3.40.50.12150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 42.0 | 3.13e-01 | 90.6% | 57.0% |
| 1shyB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 41.0 | 2.47e-01 | 96.2% | 39.3% |
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.51 | 37.0 | 3.95e-01 | 100.0% | 95.6% |
| 4a2lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 2.76e-01 | 100.0% | 87.1% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3786743 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.80 | 52.0 | 3.22e-01 | 81.1% | 13.5% |
| None | — | 0.80 | 49.0 | 2.93e-01 | 81.1% | 9.4% | |
| 4558923 | 865.1.1.2 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › TilS_C | 0.79 | 54.0 | 4.24e-01 | 92.5% | 36.2% |
| 4817067 | 5.1.4.323 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_1st | 0.77 | 48.0 | 3.32e-01 | 79.2% | 19.4% |
| 3950424 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.77 | 48.0 | 4.68e-01 | 83.0% | 56.7% |
| 3619889 | 331.23.1.7 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF73-100_C | 0.77 | 47.0 | 4.31e-01 | 81.1% | 47.1% |
| 3992641 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.76 | 47.0 | 4.31e-01 | 81.1% | 47.1% |
| 4957121 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 55.0 | 5.13e-01 | 81.1% | 66.2% |
| 3602976 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 56.0 | 5.54e-01 | 83.0% | 80.0% |
| 3574641 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.72 | 48.0 | 3.15e-01 | 81.1% | 16.8% |
| 3726970 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.70 | 53.0 | 3.14e-01 | 81.1% | 11.2% |
| 3882452 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.70 | 48.0 | 3.27e-01 | 81.1% | 20.5% |
| 4356813 | 6043.2.1.0 ↗ | a+b two layers › yfeY-like › Teichoic acid transporter subunit TagH C-terminal domain › Teichoic acid transporter subunit TagH C-terminal domain | 0.70 | 54.0 | 4.02e-01 | 83.0% | 100.0% |
| 3263503 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.69 | 45.0 | 3.99e-01 | 79.2% | 46.7% |
| 4239781 | 3006.1.1.6 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C | 0.69 | 45.0 | 4.17e-01 | 79.2% | 51.4% |
| 4027923 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 51.0 | 2.88e-01 | 81.1% | 9.5% |
| 3166905 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.69 | 45.0 | 2.75e-01 | 81.1% | 11.6% |
| 3178555 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 49.0 | 2.72e-01 | 77.4% | 7.4% |
| 4951973 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 51.0 | 5.12e-01 | 83.0% | 80.0% |
| 3998597 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.68 | 50.0 | 3.49e-01 | 81.1% | 24.3% |
| 3672926 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 46.0 | 3.01e-01 | 81.1% | 16.9% |
| 1003930 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.67 | 52.0 | 4.53e-01 | 84.9% | 55.7% |
| 4029107 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 43.0 | 2.75e-01 | 83.0% | 12.7% |
| 3517350 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.67 | 44.0 | 2.71e-01 | 81.1% | 11.1% |
| 3575058 | 5.1.5.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › ELYS-bb | 0.66 | 49.0 | 3.08e-01 | 81.1% | 16.1% |
| 3169459 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.66 | 50.0 | 2.91e-01 | 81.1% | 10.7% |
| 3960091 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 56.0 | 3.65e-01 | 100.0% | 27.8% |
| 3931704 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.65 | 50.0 | 3.89e-01 | 81.1% | 42.7% |
| 3520661 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 40.0 | 2.33e-01 | 79.2% | 6.5% |
| 3224618 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 43.0 | 2.61e-01 | 81.1% | 10.4% |
| 3556708 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.64 | 42.0 | 3.76e-01 | 79.2% | 46.7% |
| 4011362 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.64 | 49.0 | 3.06e-01 | 84.9% | 73.8% |
| 5004274 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.63 | 41.0 | 3.73e-01 | 79.2% | 48.0% |
| 3899940 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.63 | 40.0 | 3.59e-01 | 79.2% | 43.8% |
| 3967552 | 375.1.1.71 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2387 | 0.63 | 45.0 | 4.78e-01 | 79.2% | 95.6% |
| 3228567 | 2484.1.1.162 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box | 0.63 | 57.0 | 4.11e-01 | 100.0% | 49.3% |
| 3875841 | 5.1.4.619 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF27600, PF27601 | 0.62 | 41.0 | 2.28e-01 | 81.1% | 4.3% |
| 3890750 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 47.0 | 3.91e-01 | 81.1% | 47.8% |
| 1291143 | 9.1.1.17 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF | 0.62 | 52.0 | 3.86e-01 | 98.1% | 72.3% |
| 4029623 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 44.0 | 2.57e-01 | 79.2% | 19.3% |
| 4900147 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.61 | 45.0 | 2.84e-01 | 81.1% | 14.4% |
| 3175498 | 5.1.4.332 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29748 | 0.61 | 46.0 | 2.77e-01 | 81.1% | 12.1% |
| 3818615 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.61 | 44.0 | 2.74e-01 | 79.2% | 13.6% |
| 3490378 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.61 | 40.0 | 3.57e-01 | 79.2% | 46.3% |
| 2736140 | 5.1.5.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N,Dpp_8_9_N | 0.61 | 40.0 | 2.29e-01 | 79.2% | 6.2% |
| 3593656 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.61 | 51.0 | 3.04e-01 | 100.0% | 11.4% |
| 3717097 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.60 | 49.0 | 2.91e-01 | 100.0% | 11.0% |
| 3687353 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 39.0 | 2.73e-01 | 79.2% | 18.9% |
| 3591016 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 43.0 | 3.93e-01 | 81.1% | 58.7% |
| 3713703 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 45.0 | 3.53e-01 | 83.0% | 49.6% |
| 3484776 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 40.0 | 3.08e-01 | 100.0% | 31.7% |
| 3975917 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.58 | 48.0 | 3.96e-01 | 94.3% | 80.0% |
| 3445390 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.58 | 46.0 | 3.60e-01 | 100.0% | 40.9% |
| 3929384 | 219.1.1.9 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 | 0.58 | 46.0 | 3.12e-01 | 92.5% | 70.2% |
| 3439608 | 5.1.4.219 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N | 0.57 | 44.0 | 2.67e-01 | 86.8% | 33.1% |
| 3786078 | 109.4.1.1764 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 | 0.57 | 44.0 | 2.57e-01 | 100.0% | 9.1% |
| 3747619 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 50.0 | 3.01e-01 | 100.0% | 94.8% |
| 5080337 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.57 | 41.0 | 3.49e-01 | 79.2% | 46.1% |
| 3563385 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.57 | 49.0 | 2.97e-01 | 100.0% | 91.3% |
| 3171576 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.56 | 42.0 | 3.71e-01 | 81.1% | 56.2% |
| 3595832 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.56 | 37.0 | 3.68e-01 | 100.0% | 65.5% |
| 5031337 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.56 | 36.0 | 3.95e-01 | 98.1% | 89.7% |
| 3819668 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.56 | 36.0 | 3.82e-01 | 98.1% | 79.5% |
| 1414015 | 5.1.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin | 0.55 | 42.0 | 2.87e-01 | 84.9% | 87.7% |
| 3896010 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.55 | 45.0 | 3.21e-01 | 100.0% | 28.9% |
| 3308887 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.55 | 40.0 | 2.44e-01 | 83.0% | 34.5% |
| 3482645 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.55 | 35.0 | 3.98e-01 | 98.1% | 100.0% |
| 4932308 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.54 | 35.0 | 3.90e-01 | 96.2% | 100.0% |
| 4463837 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.54 | 38.0 | 3.15e-01 | 100.0% | 39.0% |
| None | — | 0.53 | 40.0 | 2.49e-01 | 83.0% | 53.8% | |
| 3775455 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 42.0 | 2.43e-01 | 100.0% | 12.5% |
| 5038830 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.53 | 39.0 | 3.23e-01 | 100.0% | 43.0% |
| 5009180 | 5.1.3.127 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Tricorn_N | 0.53 | 45.0 | 2.85e-01 | 100.0% | 88.6% |
| 4968405 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.52 | 37.0 | 3.00e-01 | 100.0% | 37.3% |
| 5033222 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.52 | 37.0 | 3.03e-01 | 100.0% | 39.0% |
| 3821398 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.52 | 43.0 | 2.76e-01 | 100.0% | 90.5% |
| 3357726 | 386.1.1.207 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 | 0.51 | 35.0 | 3.16e-01 | 77.4% | 52.0% |
| 4478971 | 4.1.1.174 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF951 | 0.50 | 37.0 | 3.58e-01 | 92.5% | 69.2% |
D2
high
residues 83-232
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01008__D941-1111
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oe4A00 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.67 | 47.0 | 3.94e-01 | 71.3% | 84.5% |
| 5mx4A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.62 | 43.0 | 3.66e-01 | 70.0% | 85.4% |
| 1p5jA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 26.0 | 3.17e-01 | 70.0% | 70.8% |
| 2f6uA00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.53 | 37.0 | 3.18e-01 | 72.7% | 46.8% |
| 3g8qA01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 31.0 | 3.50e-01 | 87.3% | 77.0% |
| 6fjxA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 47.0 | 3.87e-01 | 99.3% | 95.6% |
| 3e35A01 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.51 | 41.0 | 3.60e-01 | 86.0% | 66.7% |
| 2l3fA00 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.50 | 42.0 | 4.16e-01 | 88.7% | 83.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4275547 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.70 | 44.0 | 4.74e-01 | 73.3% | 73.1% |
| 2722071 | 2010.1.1.4 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › FakA-like_C | 0.67 | 43.0 | 4.60e-01 | 88.7% | 73.8% |
| 5027900 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.59 | 38.0 | 3.85e-01 | 88.0% | 64.7% |
| 5016612 | 7574.1.1.4 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › POR_N | 0.58 | 52.0 | 4.12e-01 | 98.0% | 93.5% |
| None | — | 0.54 | 41.0 | 3.45e-01 | 78.7% | 51.9% | |
| 3250890 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 39.0 | 3.82e-01 | 88.0% | 68.8% |
| 4036017 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 36.0 | 3.73e-01 | 88.0% | 72.1% |
| 3402586 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 37.0 | 3.43e-01 | 88.0% | 54.4% |
| 4957455 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.54 | 36.0 | 3.72e-01 | 88.0% | 71.0% |
| 4282347 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 37.0 | 3.71e-01 | 88.7% | 69.7% |
| 3351875 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 37.0 | 3.58e-01 | 88.0% | 62.9% |
| 1157890 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 36.0 | 3.44e-01 | 88.7% | 59.3% |
| 3636565 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 38.0 | 3.51e-01 | 88.0% | 60.0% |
| 3569927 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 37.0 | 3.65e-01 | 89.3% | 68.5% |
| 3961453 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 38.0 | 3.58e-01 | 88.0% | 63.2% |
| 4928866 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.51 | 35.0 | 3.79e-01 | 70.7% | 100.0% |