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FR751545.1__CBY88552.1__X__00021

Bact-Vir

FR751545.1__CBY88552.1__X__00021

Identity

Accession:
FR751545 ↗
Kingdom:
phage

Quality

89.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Waewaevirus› Pantoea_phage_LIMEzero

TaxID: 943335

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-55
PDB
Domain cluster: rep: NC_014636.1__YP_003969343.1__phiAS5_ORF0054__00054__D13-67
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 5.39e-01 84.9% 75.0%
2pb2B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.73 37.0 2.68e-01 90.6% 19.0%
5dm6H00 2.40.150.20 Mainly Beta › Beta Barrel › Ribosomal Protein L14 › Ribosomal protein L14/L23 0.69 57.0 4.31e-01 94.3% 70.9%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 3.94e-01 79.2% 55.3%
2m9uA00 2.30.30.850 Mainly Beta › Roll › SH3 type barrels. › 0.66 50.0 4.30e-01 84.9% 51.7%
5nmxB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 51.0 4.21e-01 98.1% 65.6%
2xveA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 51.0 4.10e-01 98.1% 68.0%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.57 51.0 3.99e-01 100.0% 62.2%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 46.0 4.02e-01 96.2% 69.0%
1v61A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.50e-01 100.0% 53.8%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.53 42.0 3.46e-01 92.5% 64.5%
3h8lA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 3.26e-01 98.1% 74.2%
2zg2A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.78e-01 100.0% 91.0%
2rjqA02 3.40.1620.60 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › 0.51 34.0 3.18e-01 77.4% 52.1%
5tipA01 2.70.9.10 Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Adenovirus Type 2 Hexon, domain 4 0.50 42.0 2.99e-01 100.0% 86.2%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3935534 375.1.9.2 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › SANTA 0.72 65.0 4.73e-01 100.0% 45.9%
3504834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.26e-01 90.6% 84.5%
3928050 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 4.13e-01 96.2% 48.1%
4517008 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.64 52.0 4.66e-01 94.3% 75.0%
3587629 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.69e-01 88.7% 83.1%
1866049 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.78e-01 90.6% 90.2%
3433881 5.3.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.59 41.0 3.11e-01 94.3% 28.9%
3591052 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 49.0 4.62e-01 96.2% 98.5%
3839768 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 52.0 3.15e-01 100.0% 18.6%
1270114 2003.1.2.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.57 51.0 4.05e-01 98.1% 66.7%
3313853 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.55 41.0 2.47e-01 81.1% 12.3%
4569015 508.1.1.1 ↗ a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 0.55 41.0 3.06e-01 81.1% 76.9%
4632710 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 38.0 3.99e-01 79.2% 88.9%
3333660 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.53 46.0 3.25e-01 98.1% 61.3%
3471756 316.1.1.40 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_7 0.51 37.0 2.65e-01 84.9% 63.4%