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FR823450.1__CBZ42285.1__X__00118
Bact-VirFR823450.1__CBZ42285.1__X__00118
Identity
- Accession:
- FR823450 ↗
- Kingdom:
- phage
Quality
78.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Fletchervirus›
Campylobacter_phage_CP81
TaxID: 2927008
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-171
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.77 | 63.0 | 5.85e-01 | 86.4% | 87.7% |
| 1xrsB01 | 3.30.30.60 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain | 0.71 | 33.0 | 4.69e-01 | 77.1% | 100.0% |
| 4evuB00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.70 | 34.0 | 4.30e-01 | 78.8% | 77.9% |
| 3nlcA01 | 3.30.70.2700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 38.0 | 4.60e-01 | 85.6% | 86.8% |
| 1cl7I00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 32.0 | 3.69e-01 | 90.7% | 68.3% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 29.0 | 3.53e-01 | 81.4% | 66.7% |
| 2re1A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 27.0 | 3.35e-01 | 76.3% | 66.2% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 26.0 | 3.13e-01 | 75.4% | 56.8% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 30.0 | 3.64e-01 | 96.6% | 73.3% |
| 2w7vA00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.59 | 28.0 | 3.36e-01 | 80.5% | 64.6% |
| 1in0A02 | 3.30.70.990 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YajQ-like, domain 2 | 0.59 | 32.0 | 3.59e-01 | 89.8% | 67.4% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 31.0 | 3.60e-01 | 84.7% | 72.0% |
| 5h5zA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 33.0 | 3.70e-01 | 90.7% | 72.7% |
| 2khdA00 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 30.0 | 3.13e-01 | 83.9% | 53.7% |
| 3f8uD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 35.0 | 3.72e-01 | 93.2% | 69.8% |
| 4q9cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 34.0 | 3.60e-01 | 90.7% | 68.6% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.56 | 38.0 | 3.91e-01 | 87.3% | 73.5% |
| 2ahoB03 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.55 | 31.0 | 3.45e-01 | 84.7% | 69.3% |
| 2cq4A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 28.0 | 3.09e-01 | 86.4% | 56.7% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.54 | 35.0 | 3.73e-01 | 87.3% | 75.2% |
| 3i9fB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 32.0 | 2.84e-01 | 86.4% | 40.8% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 26.0 | 3.16e-01 | 78.8% | 72.0% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.52 | 30.0 | 3.51e-01 | 84.7% | 83.7% |
| 2pd1A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 27.0 | 3.00e-01 | 81.4% | 62.1% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 28.0 | 3.07e-01 | 86.4% | 63.7% |
| 2od4B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 28.0 | 3.21e-01 | 90.7% | 68.5% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.50 | 32.0 | 2.94e-01 | 100.0% | 45.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838429 | 872.10.1.1 ↗ | a+b two layers › Dodecin subunit-like › Secreted protein HP1454 N-terminal domain › Secreted protein HP1454 N-terminal domain › LPP20 | 0.83 | 72.0 | 6.86e-01 | 94.1% | 79.3% |
| 3839604 | 592.2.1.4 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › Tipalpha | 0.77 | 63.0 | 5.77e-01 | 86.4% | 83.7% |
| 3796360 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.69 | 34.0 | 3.35e-01 | 87.3% | 44.0% |
| 4947074 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.68 | 28.0 | 3.62e-01 | 78.0% | 64.3% |
| 3258439 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 33.0 | 3.68e-01 | 83.9% | 58.9% |
| 1786500 | 304.9.1.75 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF8436 | 0.66 | 39.0 | 4.55e-01 | 86.4% | 84.8% |
| 3591080 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 29.0 | 3.49e-01 | 81.4% | 63.7% |
| 3704224 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.63 | 29.0 | 3.26e-01 | 84.7% | 53.7% |
| 3917225 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.63 | 34.0 | 3.50e-01 | 90.7% | 53.9% |
| 3274732 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 34.0 | 3.72e-01 | 94.1% | 64.2% |
| 4257535 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.62 | 38.0 | 3.91e-01 | 86.4% | 62.6% |
| 5049192 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 27.0 | 3.13e-01 | 81.4% | 55.3% |
| 5072112 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.61 | 35.0 | 3.25e-01 | 96.6% | 41.9% |
| 4959193 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.61 | 33.0 | 3.80e-01 | 86.4% | 71.8% |
| 4945414 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.60 | 40.0 | 4.52e-01 | 90.7% | 88.9% |
| 5064074 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.59 | 33.0 | 3.57e-01 | 87.3% | 63.0% |
| 3881499 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.59 | 33.0 | 3.25e-01 | 90.7% | 49.2% |
| 4936075 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 30.0 | 3.49e-01 | 83.9% | 68.8% |
| 5072589 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.57 | 34.0 | 3.15e-01 | 77.1% | 47.2% |
| 3706819 | 304.49.1.6 ↗ | a+b two layers › Alpha-beta plaits › TRADD, N-terminal domain/Dystroglycan, domain 2 › TRADD, N-terminal domain/Dystroglycan, domain 2 › FAZ1_cons | 0.56 | 34.0 | 3.45e-01 | 86.4% | 58.3% |
| 4937853 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.56 | 25.0 | 3.15e-01 | 80.5% | 68.6% |
| 4983053 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.56 | 29.0 | 3.35e-01 | 84.7% | 67.1% |
| 4678670 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.56 | 27.0 | 3.15e-01 | 86.4% | 62.5% |
| 3599800 | 2003.1.5.165 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11, Methyltransf_23 | 0.55 | 40.0 | 2.86e-01 | 75.4% | 77.2% |
| 3591566 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.54 | 34.0 | 3.69e-01 | 86.4% | 75.0% |
| 5060761 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.53 | 30.0 | 3.21e-01 | 86.4% | 61.9% |
| 5039525 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.52 | 28.0 | 3.16e-01 | 81.4% | 66.7% |
| 3329735 | 327.11.2.37 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st | 0.52 | 27.0 | 3.31e-01 | 81.4% | 80.0% |