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F
Euk-VirSucra_jujuba_nucleopolyhedrovirus
F__YP_009186806__Sucra_jujuba_nucleopolyhedrovirus__1563660
Identity
- Accession:
- YP_009186806 ↗
- Protein ID:
- F
- Kingdom:
- euk
Quality
70.4
mean pLDDT
Taxonomy
TaxID: 1563660
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 32-53_346-358_414-561
Domain cluster:
rep: efp__YP_004376238__Clostera_anachoreta_granulovirus__283675__D22-47_387-525
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 176.1 | 1.80e-51 | 80.3% | 23.3% |
D2
medium
residues 54-72_262-345_359-413
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 168.2 | 4.40e-49 | 89.2% | 24.3% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 25.0 | 3.23e-01 | 77.8% | 61.1% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.57 | 21.0 | 3.02e-01 | 82.3% | 70.4% |
| 6wy9B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.55 | 24.0 | 3.00e-01 | 75.3% | 63.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932468 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 24.0 | 3.22e-01 | 76.6% | 62.4% |
| 5028044 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 27.0 | 3.02e-01 | 79.7% | 59.7% |
| 2063291 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.51 | 23.0 | 2.56e-01 | 83.5% | 51.6% |
D3
medium
residues 73-154_171-261
Domain cluster:
rep: F_protein__YP_009165735__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D49-139_173-272
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 155.8 | 2.50e-45 | 100.0% | 30.9% |