F_protein

Euk-Vir

Euproctis_pseudoconspersa_nucleopolyhedrovirus

F_protein__YP_002854744__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467

Identity

70.4 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Euproctis_pseudoconspersa_nucleopolyhedrovirus

TaxID: 307467

View cluster (44 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 57-157_175-272

PDB

Domain cluster: rep: F_protein__YP_009165735__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D49-139_173-272

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	192.5	1.90e-56	100.0%	33.5%

D2 medium residues 31-44_437-503

PDB

Domain cluster: rep: fusion_protein__YP_009117053__Pseudoplusia_includens_SNPV_IE__1592335__D24-36_422-482

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	75.9	3.80e-21	87.6%	11.0%

D3 medium residues 45-56_273-336_377-398

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	73.8	1.70e-20	71.4%	10.7%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4r6uA03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.58	32.0	3.14e-01	70.4%	51.5%
8ediA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.57	33.0	3.31e-01	72.4%	53.8%
3onrJ00	3.30.1660.10	Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin	0.53	34.0	3.91e-01	72.4%	92.6%
1j20A02	3.90.1260.10	Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2	0.52	40.0	3.22e-01	84.7%	98.6%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3740624	101.1.2.111 ↗	alpha arrays › HTH › HTH › winged helix domain › RQC	0.55	44.0	4.07e-01	87.8%	86.4%
4669204	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.54	38.0	2.48e-01	73.5%	97.6%
3167160	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.54	39.0	2.47e-01	76.5%	69.1%
5049779	213.1.1.0 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat)	0.53	32.0	2.74e-01	75.5%	33.7%
3480534	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.53	42.0	3.97e-01	87.8%	89.2%
5079724	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	33.0	3.24e-01	91.8%	59.0%
3834564	387.1.5.15 ↗	few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SLR1-BP	0.52	27.0	3.43e-01	71.4%	98.0%
3249715	101.1.2.111 ↗	alpha arrays › HTH › HTH › winged helix domain › RQC	0.51	40.0	3.77e-01	87.8%	85.6%
4287081	1.1.5.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel	0.51	35.0	3.23e-01	71.4%	55.2%
3928059	327.11.2.14 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_9	0.50	30.0	3.09e-01	71.4%	61.1%
3518019	101.1.2.111 ↗	alpha arrays › HTH › HTH › winged helix domain › RQC	0.50	40.0	3.65e-01	89.8%	87.9%

D4 medium residues 337-376_399-436_542-566

PDB

Domain cluster: rep: envelope_fusion_protein__YP_009345747__Mythimna_unipuncta_granulovirus_B__2169746__D27-50_306-403_477-502

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	58.4	7.70e-16	42.7%	7.1%
PF12259.14	Baculo_F	29.0	6.30e-07	39.8%	5.9%