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F_protein

Euk-Vir

Mount_Mabu_Lophuromys_virus_1

F_protein__YP_009666844__Mount_Mabu_Lophuromys_virus_1__2116559

Identity

Accession:
YP_009666844 ↗
Protein ID:
F_protein
Kingdom:
euk

Quality

75.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 25-44_293-371_436-448
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00523.24 best Fusion_gly 65.2 5.30e-18 96.4% 18.5%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g5gA01 2.40.490.10 Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain 0.86 70.0 7.11e-01 84.8% 100.0%
1ztmA01 2.40.490.10 Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain 0.86 71.0 7.28e-01 86.6% 99.1%
2b9bA01 2.40.490.10 Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain 0.86 81.0 8.04e-01 98.2% 100.0%
2de6A02 2.20.25.680 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.50 24.0 3.24e-01 94.6% 87.9%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1737404 5093.1.1.1 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly 0.98 84.0 5.70e-01 88.4% 99.4%
4871079 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.96 80.0 5.60e-01 86.6% 99.7%
4873341 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.93 79.0 5.40e-01 87.5% 99.4%
1738158 5093.1.1.1 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly 0.92 76.0 5.14e-01 84.8% 100.0%
4872787 5093.1.1.1 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly 0.91 64.0 4.70e-01 72.3% 30.8%
4871594 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.91 67.0 4.53e-01 75.0% 27.7%
4884487 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.89 65.0 4.42e-01 75.0% 27.0%
4881664 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.86 70.0 5.10e-01 84.8% 58.7%
1175806 5093.1.1.1 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly 0.84 68.0 4.87e-01 84.8% 52.9%
3237142 5093.1.1.0 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein 0.64 49.0 3.51e-01 81.2% 83.4%
D2 medium residues 45-64_223-292
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00523.24 best Fusion_gly 62.7 2.90e-17 77.8% 14.2%
D3 medium residues 65-100_124-222
PDB
D4 medium residues 372-435
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00523.24 best Fusion_gly 46.5 2.40e-12 100.0% 12.3%
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g5gA03 2.60.40.1690 Mainly Beta › Sandwich › Immunoglobulin-like › Head and neck region of the ectodomain of NDV fusion glycoprotein 0.90 77.0 7.92e-01 90.6% 96.7%
4gipD03 2.60.40.1690 Mainly Beta › Sandwich › Immunoglobulin-like › Head and neck region of the ectodomain of NDV fusion glycoprotein 0.88 73.0 7.65e-01 89.1% 100.0%
1ztmA03 2.60.40.1690 Mainly Beta › Sandwich › Immunoglobulin-like › Head and neck region of the ectodomain of NDV fusion glycoprotein 0.85 66.0 7.14e-01 82.8% 100.0%
3un0A00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.65 52.0 4.42e-01 90.6% 55.0%
2ed8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 50.0 4.61e-01 90.6% 100.0%
2x1wO01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 53.0 4.72e-01 96.9% 97.9%
3obaA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 49.0 4.52e-01 92.2% 91.0%
3a21A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 42.0 3.76e-01 71.9% 95.6%
4dohE02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 49.0 4.31e-01 93.8% 97.2%
3s98A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 48.0 4.35e-01 95.3% 93.7%
2edyA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 48.0 4.21e-01 93.8% 88.3%
4n68A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 46.0 4.12e-01 92.2% 92.9%
1j0hA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 41.0 3.83e-01 75.0% 92.8%
3cu7A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.58 45.0 4.01e-01 92.2% 95.3%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 44.0 3.74e-01 89.1% 89.3%
3rbsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 4.33e-01 93.8% 97.7%
7o52U01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 4.46e-01 87.5% 100.0%
3a5vA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 45.0 3.95e-01 89.1% 94.9%
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.56 32.0 3.10e-01 96.9% 48.6%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 38.0 3.49e-01 75.0% 94.5%
3cc1A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 38.0 3.51e-01 75.0% 93.2%
1dfxA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.54 40.0 3.42e-01 85.9% 65.6%
2covG00 2.60.40.2450 Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain 0.54 44.0 4.09e-01 96.9% 96.6%
1wzlA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 38.0 3.62e-01 79.7% 95.2%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.86e-01 82.8% 86.8%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.85e-01 81.2% 84.7%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 40.0 3.97e-01 82.8% 93.9%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 3.70e-01 76.6% 92.4%
7v4mB01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.52 43.0 3.29e-01 96.9% 81.1%
3bn6A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 36.0 2.85e-01 79.7% 88.6%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2163015 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.91 84.0 8.15e-01 100.0% 91.3%
4871069 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.91 85.0 8.27e-01 100.0% 95.7%
4881664 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.89 82.0 5.26e-01 100.0% 24.4%
1175806 5093.1.1.1 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly 0.88 81.0 5.11e-01 100.0% 22.0%
4887145 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.87 63.0 6.55e-01 75.0% 81.4%
1760669 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.87 79.0 7.58e-01 100.0% 91.7%
1737321 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.86 71.0 7.32e-01 87.5% 93.3%
1737113 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.86 71.0 7.37e-01 89.1% 95.0%
2868232 5093.1.1.1 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly 0.76 67.0 4.05e-01 100.0% 15.3%
4874199 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.75 67.0 3.98e-01 100.0% 14.6%
4922053 5093.1.1.4 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly, Fibritin_C 0.73 63.0 3.86e-01 100.0% 16.4%
1770149 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.72 63.0 6.03e-01 100.0% 89.3%
2756984 11.40.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly 0.72 59.0 5.68e-01 92.2% 80.0%
2722705 5093.1.1.1 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly 0.72 62.0 3.75e-01 100.0% 14.8%
5011691 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 53.0 4.47e-01 92.2% 80.0%
3572304 11.1.1.129 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.61 50.0 4.03e-01 95.3% 75.4%
3179498 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.61 49.0 3.87e-01 96.9% 51.2%
4026913 243.6.1.4 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.61 30.0 2.78e-01 71.9% 35.3%
3407194 5093.1.1.2 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Baculo_F 0.61 50.0 3.17e-01 100.0% 18.0%
3901601 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 47.0 4.26e-01 90.6% 94.7%
1673887 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.60 47.0 4.29e-01 87.5% 78.4%
3884571 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 46.0 4.11e-01 90.6% 89.5%
5014155 11.1.1.1418 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_14 0.60 46.0 3.95e-01 85.9% 85.2%
3542410 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 3.87e-01 93.8% 67.4%
3910257 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 49.0 4.70e-01 93.8% 100.0%
3901017 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 46.0 4.11e-01 92.2% 93.0%
3583164 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 46.0 4.16e-01 92.2% 91.6%
3504733 12.1.1.50 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd 0.59 43.0 4.08e-01 81.2% 95.0%
3775988 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.58 46.0 3.81e-01 95.3% 67.4%
4635237 12.1.1.52 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GLGE_C 0.56 40.0 3.48e-01 75.0% 87.0%
4950992 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.56 39.0 3.73e-01 76.6% 100.0%
3740180 12.1.1.14 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.56 39.0 3.55e-01 75.0% 81.1%
3610639 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 3.80e-01 89.1% 100.0%
5040888 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.55 40.0 3.76e-01 79.7% 98.8%
3407616 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.54 38.0 3.45e-01 76.6% 71.6%
5070610 4.1.2.2 beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.53 38.0 3.54e-01 81.2% 100.0%
3586008 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.87e-01 81.2% 85.7%
3194190 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.52 39.0 3.10e-01 81.2% 69.1%
4325609 11.1.4.122 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PTR2 0.52 40.0 3.68e-01 87.5% 87.8%
141626 10.12.1.43 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-Fe_Oxy_2 0.51 42.0 2.91e-01 95.3% 71.3%
4936711 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.28e-01 79.7% 86.0%