Fascin-like_incomplete_domain

Euk-Vir

Pandoravirus_salinus

Fascin-like_incomplete_domain__YP_008436667__Pandoravirus_salinus__1349410

Identity

77.7 mean pLDDT

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

View cluster (82 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 346-464

PDB

Domain cluster: rep: AB012112.1__BAA75082.1__X__00004__D18-146

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06229.19 best	FRG1	34.5	2.40e-08	71.4%	37.0%

D2 medium residues 28-54_73-106_120-139

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5tz6B02	3.10.129.120	Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A ›	0.61	54.0	4.40e-01	100.0%	74.0%
1yqfB00	3.10.280.10	Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein	0.58	40.0	3.06e-01	98.8%	32.2%
3vvvA00	2.60.40.2840	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.56	40.0	3.68e-01	75.3%	88.0%
1ohfA03	2.60.270.70	Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 ›	0.55	49.0	4.08e-01	100.0%	82.3%
1bcoA02	2.30.30.130	Mainly Beta › Roll › SH3 type barrels. › Transposase, Mu, C-terminal	0.54	41.0	4.42e-01	84.0%	98.5%
1ei5A03	2.40.128.50	Mainly Beta › Beta Barrel › Lipocalin ›	0.53	37.0	3.45e-01	98.8%	56.9%
4k15A00	2.60.40.3860	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.53	38.0	3.23e-01	75.3%	50.0%
8ornD01	2.50.20.10	Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX	0.53	35.0	2.74e-01	92.6%	31.8%
4ntqA00	3.10.380.20	Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain	0.53	32.0	3.31e-01	92.6%	63.2%
6az1E03	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.53	32.0	3.35e-01	93.8%	66.7%
3dueA00	3.40.1420.30	Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy ›	0.51	42.0	3.64e-01	90.1%	76.4%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4938162	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.73	43.0	4.21e-01	98.8%	53.3%
4947515	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.63	31.0	3.63e-01	84.0%	65.0%
3260630	222.1.1.12 ↗	a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH	0.60	54.0	4.19e-01	100.0%	73.9%
5028814	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.60	42.0	3.90e-01	71.6%	96.0%
1031811	222.1.1.12 ↗	a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH	0.58	52.0	4.11e-01	100.0%	66.7%
3286706	10.37.1.1 ↗	beta sandwiches › jelly-roll › TerD › TerD › TerD	0.56	43.0	3.60e-01	86.4%	76.8%
3593777	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.53	45.0	2.77e-01	97.5%	16.8%

D3 medium residues 55-72_107-119_140-302

PDB

Domain cluster: rep: Fascin-like_protein__YP_009165023__Mollivirus_sibericum_Viruses.__X__D59-76_138-277

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21722.5 best	Gly_rich_2	39.8	7.20e-10	87.6%	62.9%