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Fascin-like_incomplete_domain_containing_protein

Euk-Vir

Pandoravirus_neocaledonia

Fascin-like_incomplete_domain_containing_protein__YP_009482348__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009482348 ↗
Protein ID:
Fascin-like_incomplete_domain_containing_protein
Kingdom:
euk

Quality

76.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (82 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 344-462
PDB
Domain cluster: rep: AB012112.1__BAA75082.1__X__00004__D18-146
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06229.19 best FRG1 40.2 4.20e-10 74.8% 38.6%
D2 medium residues 36-108_125-145
PDB
Domain cluster: rep: Fascin-like_incomplete_domain__YP_008436667__Pandoravirus_salinus__1349410__D28-54_73-106_120-139
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21722.5 best Gly_rich_2 44.4 2.80e-11 94.7% 29.5%
D3 medium residues 109-124_146-231
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.52 46.0 3.45e-01 100.0% 91.2%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.52 45.0 3.30e-01 100.0% 79.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5040363 5.1.4.87 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD 0.56 48.0 3.29e-01 100.0% 57.2%
D4 medium residues 232-303
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rpcA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 41.0 2.89e-01 91.7% 92.4%
1djsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 38.0 3.54e-01 87.5% 65.7%