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Fascin-like_protein
Euk-VirPandoravirus_neocaledonia
Fascin-like_protein__YP_009482036__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482036 ↗
- Protein ID:
- Fascin-like_protein
- Kingdom:
- euk
Quality
82.6
mean pLDDT
Cluster
View cluster (82 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 317-435
Domain cluster:
rep: AB012112.1__BAA75082.1__X__00004__D18-146
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06229.19 best | FRG1 | 28.7 | 1.50e-06 | 72.3% | 38.1% |
D2
medium
residues 30-60_77-172_303-316
Domain cluster:
rep: KM199771.1__AIK68527.1__Lo5R7ANS_57__00057__D358-488_526-544
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21722.5 best | Gly_rich_2 | 28.9 | 1.60e-06 | 92.2% | 48.2% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5v00B01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 34.0 | 4.43e-01 | 100.0% | 82.9% |
| 3kl0D01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 34.0 | 3.86e-01 | 98.6% | 66.0% |
| 1zx5A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 34.0 | 4.37e-01 | 99.3% | 88.0% |
| 1yllA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 36.0 | 4.45e-01 | 100.0% | 85.9% |
| 2p3yA03 | 2.60.40.1610 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF1254 | 0.61 | 39.0 | 3.87e-01 | 100.0% | 60.1% |
| 4qmaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 31.0 | 3.16e-01 | 100.0% | 48.3% |
| 2xwxA03 | 2.60.40.2550 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 28.0 | 3.27e-01 | 91.5% | 62.2% |
| 1omiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 30.0 | 3.39e-01 | 100.0% | 65.7% |
| 1ne6A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 29.0 | 3.06e-01 | 100.0% | 51.6% |
| 6oauA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.56 | 30.0 | 3.26e-01 | 92.2% | 59.8% |
| 2qjvA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 33.0 | 3.69e-01 | 100.0% | 73.5% |
| 6m9sD01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 30.0 | 3.50e-01 | 99.3% | 73.3% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.55 | 36.0 | 4.18e-01 | 100.0% | 93.9% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 29.0 | 3.62e-01 | 99.3% | 87.3% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 33.0 | 3.19e-01 | 100.0% | 52.8% |
| 2q7nA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 32.0 | 3.79e-01 | 96.5% | 85.7% |
| 3cslA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.53 | 43.0 | 2.78e-01 | 85.1% | 31.4% |
| 3clpC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 31.0 | 3.19e-01 | 100.0% | 59.4% |
| 2qvsB02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 29.0 | 3.08e-01 | 100.0% | 58.0% |
| 8shiI01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 32.0 | 3.62e-01 | 93.6% | 81.7% |
| 2cuhA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 28.0 | 3.38e-01 | 99.3% | 81.8% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 25.0 | 3.45e-01 | 91.5% | 97.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5082492 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.72 | 35.0 | 4.44e-01 | 86.5% | 77.6% |
| 5033870 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 30.0 | 3.92e-01 | 92.2% | 78.7% |
| 3966002 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.64 | 35.0 | 4.67e-01 | 97.2% | 100.0% |
| 5018137 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.63 | 31.0 | 3.87e-01 | 92.2% | 75.3% |
| 4952405 | 10.1.2.194 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like | 0.62 | 35.0 | 4.20e-01 | 97.2% | 82.1% |
| 3677238 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 36.0 | 3.75e-01 | 100.0% | 61.5% |
| 4028554 | 10.30.1.0 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain | 0.60 | 36.0 | 4.43e-01 | 98.6% | 98.8% |
| 3255075 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.59 | 30.0 | 3.17e-01 | 91.5% | 50.0% |
| 3281300 | 4.1.1.426 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31188 | 0.59 | 30.0 | 4.00e-01 | 82.3% | 100.0% |
| 5042218 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 39.0 | 4.64e-01 | 98.6% | 100.0% |
| 3607358 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.58 | 29.0 | 2.64e-01 | 91.5% | 34.6% |
| 3289784 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.57 | 31.0 | 3.13e-01 | 100.0% | 49.7% |
| 3617149 | 10.30.1.1 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin | 0.57 | 39.0 | 4.55e-01 | 98.6% | 98.0% |
| 3563893 | 10.30.1.1 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin | 0.57 | 40.0 | 4.50e-01 | 100.0% | 96.2% |
| 4100425 | 11.1.4.90 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF4550 | 0.55 | 32.0 | 3.33e-01 | 100.0% | 60.8% |
| 3943625 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.55 | 31.0 | 3.21e-01 | 100.0% | 57.0% |
| 3599140 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.55 | 36.0 | 4.34e-01 | 100.0% | 98.9% |
| 3540762 | 11.1.1.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind | 0.54 | 29.0 | 3.20e-01 | 97.2% | 61.7% |
| 4999573 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 32.0 | 3.74e-01 | 95.0% | 85.3% |
| 5014299 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 32.0 | 3.81e-01 | 97.9% | 88.4% |
| 4424937 | 11.1.1.1150 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › InlK_D3 | 0.53 | 29.0 | 3.82e-01 | 75.2% | 100.0% |
| 5073601 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 31.0 | 3.68e-01 | 97.2% | 86.3% |
| 3660959 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 31.0 | 3.48e-01 | 100.0% | 73.9% |
| 3994426 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.51 | 27.0 | 2.97e-01 | 90.8% | 59.2% |
| 3525968 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.51 | 33.0 | 3.76e-01 | 99.3% | 87.6% |
| 4943896 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 31.0 | 3.46e-01 | 95.0% | 75.7% |
| 3481210 | 10.30.1.0 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain | 0.50 | 38.0 | 4.10e-01 | 99.3% | 92.5% |
D3
medium
residues 61-76_173-302
Domain cluster:
rep: Fascin-like_protein__YP_009165023__Mollivirus_sibericum_Viruses.__X__D59-76_138-277