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Fascin-like_protein

Euk-Vir

Pandoravirus_neocaledonia

Fascin-like_protein__YP_009482541__Pandoravirus_neocaledonia__2107708

Identity

Accession:: YP_009482541 ↗
Protein ID:: Fascin-like_protein
Kingdom:: euk

Quality

70.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-108

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4chjA00	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.64	46.0	3.86e-01	74.7%	88.7%
4g2sA00	2.60.200.20	Mainly Beta › Sandwich › Tumour Suppressor Smad4 ›	0.61	53.0	4.75e-01	97.3%	97.2%
4ckbD03	2.40.50.830	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.59	48.0	3.98e-01	89.3%	70.1%
1w4bA01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.54	42.0	3.04e-01	85.3%	70.4%
3pl2A02	2.20.150.10	Mainly Beta › Single Sheet › putative 5-dehydro-2- deoxygluconokinase like fold › putative 5-dehydro-2- deoxygluconokinase	0.54	32.0	3.80e-01	97.3%	97.7%
1ohfA03	2.60.270.70	Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 ›	0.54	43.0	3.56e-01	89.3%	81.6%
2vseA03	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.53	44.0	3.73e-01	98.7%	96.5%
3dr2A00	2.120.10.30	Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain	0.53	42.0	2.96e-01	94.7%	82.6%
1rerA01	2.60.98.10	Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1	0.53	42.0	3.60e-01	89.3%	70.6%
4hr6C01	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.51	43.0	3.64e-01	97.3%	91.2%
4kc3A00	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.51	41.0	3.52e-01	96.0%	96.4%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4090709	101.1.2.8 ↗	alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C	0.66	38.0	3.36e-01	98.7%	40.4%
4029445	252.2.1.1 ↗	a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2	0.63	37.0	4.26e-01	94.7%	80.0%
3821287	4.1.1.17 ↗	beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19	0.61	42.0	3.47e-01	73.3%	52.1%
4044986	391.1.2.3 ↗	few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › SVWC	0.58	33.0	3.31e-01	70.7%	54.7%
3501894	2.1.1.39 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25	0.58	45.0	3.82e-01	84.0%	92.8%
1171095	3111.1.1.1 ↗	beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › OST_IS	0.55	47.0	4.31e-01	92.0%	90.5%
4668960	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.54	41.0	3.65e-01	82.7%	77.3%
3605358	2004.1.1.250 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd	0.53	37.0	2.38e-01	73.3%	89.2%
3704274	2.1.1.39 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25	0.52	42.0	3.37e-01	88.0%	82.0%
4343546	6.1.1.4 ↗	beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin	0.52	44.0	3.79e-01	98.7%	96.2%
3676956	2004.1.1.26 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin	0.51	36.0	2.59e-01	82.7%	24.6%
3738189	2.1.1.81 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1	0.51	41.0	3.87e-01	90.7%	86.3%

D2 high residues 143-261

PDB

Domain cluster: rep: fgf-2__YP_008720055__Clostera_anastomosis_granulovirus_Henan__1986291__D46-205

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06268.20 best	Fascin	31.3	2.70e-07	85.7%	78.7%