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Fascin-like_protein
Euk-VirPandoravirus_quercus
Fascin-like_protein__YP_009483608__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483608 ↗
- Protein ID:
- Fascin-like_protein
- Kingdom:
- euk
Quality
85.2
mean pLDDT
Cluster
View cluster (82 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 309-425
Domain cluster:
rep: AB012112.1__BAA75082.1__X__00004__D18-146
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25490.1 best | DUF7910 | 42.6 | 8.90e-11 | 98.3% | 80.0% |
| PF06229.19 | FRG1 | 27.1 | 4.60e-06 | 50.4% | 25.4% |
D2
medium
residues 33-147
Domain cluster:
rep: OQ326496.2__WDQ45474.1__X__00114__D23-48_76-131
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21722.5 best | Gly_rich_2 | 47.3 | 3.70e-12 | 98.3% | 41.1% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oqbA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 32.0 | 3.31e-01 | 90.4% | 54.6% |
| 1sh8B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 46.0 | 4.23e-01 | 99.1% | 86.6% |
| 2essA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 37.0 | 3.98e-01 | 92.2% | 89.9% |
| 1y7uA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 44.0 | 3.90e-01 | 94.8% | 69.5% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 29.0 | 3.54e-01 | 94.8% | 95.5% |
| 4kc5C03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.50 | 44.0 | 3.30e-01 | 98.3% | 39.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078225 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.68 | 31.0 | 4.38e-01 | 92.2% | 87.9% |
| 3380828 | 5.1.3.131 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Det1 | 0.57 | 39.0 | 2.63e-01 | 94.8% | 18.6% |
| 5072612 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.53 | 46.0 | 4.13e-01 | 94.8% | 88.3% |
| 4308717 | 825.1.1.0 ↗ | beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins | 0.53 | 43.0 | 3.45e-01 | 90.4% | 83.5% |
| 3423296 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.53 | 37.0 | 2.85e-01 | 98.3% | 32.4% |
| 3195296 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.53 | 45.0 | 3.71e-01 | 93.9% | 72.9% |
| 3391001 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.52 | 36.0 | 2.90e-01 | 96.5% | 37.3% |
| 4259027 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.52 | 32.0 | 3.14e-01 | 92.2% | 56.1% |
| 3283629 | 222.1.1.11 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › DUF4442 | 0.51 | 45.0 | 4.16e-01 | 99.1% | 90.7% |
| 4209113 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.51 | 44.0 | 4.16e-01 | 97.4% | 95.7% |
| 4038084 | 76.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Endotoxin_M | 0.50 | 43.0 | 3.64e-01 | 94.8% | 70.5% |
| 3923367 | 11.1.5.34 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › LAG1-DNAbind | 0.50 | 39.0 | 3.48e-01 | 82.6% | 87.3% |
| 3929950 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.50 | 43.0 | 3.75e-01 | 93.0% | 61.8% |
| 4085005 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.50 | 43.0 | 4.03e-01 | 97.4% | 90.0% |
| 4451012 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.50 | 44.0 | 3.91e-01 | 98.3% | 85.9% |
| 3407700 | 11.1.1.536 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 | 0.50 | 36.0 | 3.25e-01 | 74.8% | 97.5% |
D3
medium
residues 148-204
D4
medium
residues 205-306
Domain cluster:
rep: Fascin-like_incomplete_domain_containing_protein__YP_009483562__Pandoravirus_quercus__2107709__D207-297
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21722.5 best | Gly_rich_2 | 36.7 | 6.50e-09 | 97.1% | 39.7% |