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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00022

Bact-Vir

Filtrate_w_scaffold_1_prodigal-single.1__X__X__00022

Identity

Kingdom:
phage

Quality

79.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 32-63
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y02A01 1.10.720.140 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.96 81.0 5.94e-01 100.0% 38.5%
2gviA03 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.93 76.0 7.45e-01 90.6% 88.2%
7v8fB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.92 80.0 5.69e-01 100.0% 38.0%
2zetC00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.89 76.0 4.89e-01 100.0% 24.8%
3t7lA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.88 75.0 5.77e-01 100.0% 54.1%
2d8yA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.87 74.0 5.74e-01 100.0% 47.2%
2d8xA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.86 74.0 5.77e-01 100.0% 47.1%
2xjyA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.85 72.0 5.77e-01 96.9% 54.0%
8eb0A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.84 70.0 5.17e-01 100.0% 39.5%
3goxA02 3.30.60.130 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.82 71.0 5.97e-01 100.0% 75.9%
4hi8B00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.82 71.0 5.44e-01 100.0% 45.8%
3m7kA00 3.30.40.220 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.81 69.0 4.46e-01 100.0% 41.5%
1wimA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.81 63.0 4.69e-01 100.0% 37.2%
6u4mA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.79 62.0 5.18e-01 100.0% 50.8%
1x62A01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.76 60.0 5.12e-01 100.0% 55.0%
2cjsC01 3.30.60.120 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.75 59.0 5.74e-01 96.9% 97.4%
2co8A00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.75 59.0 4.60e-01 100.0% 64.6%
1x6aA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.73 59.0 4.93e-01 100.0% 54.8%
2ds5A00 6.20.220.10 Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › ClpX chaperone, C4-type zinc finger domain 0.68 53.0 5.08e-01 100.0% 79.1%
1a7iA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.66 48.0 4.32e-01 100.0% 86.7%
2ysmA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.64 49.0 3.60e-01 100.0% 29.7%
6g80B01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 35.0 2.11e-01 90.6% 8.1%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4941565 377.1.1.135 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF7685 0.97 88.0 8.09e-01 100.0% 82.5%
5004567 376.1.3.96 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › DUF2180 0.94 75.0 6.67e-01 90.6% 62.2%
3468455 376.1.3.16 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › ADD_ATRX 0.93 83.0 7.70e-01 100.0% 87.5%
8199 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.93 76.0 7.53e-01 90.6% 90.9%
4940794 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.93 80.0 6.95e-01 100.0% 66.0%
5021070 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.93 80.0 7.80e-01 96.9% 91.4%
3799902 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.92 82.0 7.31e-01 100.0% 75.6%
4959872 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.92 71.0 6.60e-01 84.4% 70.0%
4054302 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.92 79.0 7.06e-01 96.9% 71.1%
3922147 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.92 74.0 7.53e-01 90.6% 100.0%
3506999 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.92 75.0 7.66e-01 90.6% 100.0%
4941564 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.92 72.0 7.36e-01 87.5% 96.7%
4939301 931.1.1.0 few secondary structure elements › Metallothionein › Metallothionein › Metallothionein 0.91 74.0 7.53e-01 90.6% 100.0%
4998890 377.1.1.7 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR 0.91 74.0 6.62e-01 90.6% 66.7%
4930892 377.1.1.7 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR 0.91 75.0 6.66e-01 90.6% 66.7%
4082146 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.91 80.0 7.14e-01 100.0% 77.8%
3567692 376.1.3.85 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Znf_SCAND3 0.91 80.0 6.89e-01 100.0% 80.0%
5046967 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.91 80.0 7.49e-01 100.0% 80.0%
3511728 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.91 79.0 7.08e-01 100.0% 73.3%
5016275 377.1.1.7 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR 0.90 74.0 7.23e-01 93.8% 88.6%
3928741 376.1.1.27 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.90 78.0 5.69e-01 100.0% 41.2%
3304089 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.90 76.0 6.82e-01 96.9% 71.1%
5065598 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.90 65.0 6.35e-01 78.1% 80.0%
3495690 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.89 78.0 6.32e-01 100.0% 58.3%
4958983 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.89 75.0 6.79e-01 100.0% 73.3%
5008357 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.89 71.0 6.94e-01 90.6% 85.7%
3352595 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.88 70.0 7.17e-01 90.6% 100.0%
3211971 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.88 75.0 7.04e-01 100.0% 87.5%
3617313 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.88 73.0 7.14e-01 96.9% 94.3%
3470972 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.88 72.0 5.94e-01 96.9% 55.0%
5061253 376.1.3.97 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Prok-RING_2 0.88 76.0 5.64e-01 100.0% 40.0%
3607247 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.88 75.0 7.39e-01 100.0% 94.3%
3562587 377.1.1.34 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › FAM76 0.88 70.0 7.16e-01 93.8% 96.7%
3336883 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.88 73.0 6.68e-01 100.0% 73.3%
3211674 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.88 73.0 7.52e-01 93.8% 100.0%
3716795 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.87 75.0 7.37e-01 100.0% 100.0%
4934370 375.1.5.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein Ta0289-C 0.87 69.0 7.09e-01 93.8% 96.7%
4172765 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.87 72.0 7.37e-01 90.6% 100.0%
3435304 376.1.1.52 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › LIM 0.87 74.0 5.90e-01 100.0% 50.8%
3992752 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.87 68.0 7.02e-01 87.5% 100.0%
5053624 377.1.1.7 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR 0.86 65.0 6.60e-01 84.4% 93.3%
3526962 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.86 76.0 7.45e-01 100.0% 97.1%
3697191 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.86 74.0 7.27e-01 100.0% 91.4%
4224305 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.86 76.0 7.41e-01 100.0% 91.4%
3922373 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.86 70.0 7.19e-01 93.8% 100.0%
3515882 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.86 61.0 6.28e-01 78.1% 93.3%
3264824 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.85 68.0 7.00e-01 90.6% 100.0%
3800813 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.85 74.0 7.22e-01 100.0% 94.3%
5045480 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.85 68.0 6.74e-01 96.9% 91.4%
3996684 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.84 73.0 6.11e-01 100.0% 58.2%
3515095 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.84 61.0 6.20e-01 81.2% 93.1%
3898776 376.1.1.92 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › IRF-2BP1_2 0.84 70.0 6.22e-01 100.0% 69.4%
3628874 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.83 71.0 6.98e-01 100.0% 94.3%
4946657 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.83 71.0 5.70e-01 100.0% 92.3%
3529053 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.83 71.0 7.00e-01 100.0% 94.3%
3573660 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.83 69.0 5.13e-01 100.0% 40.0%
3268530 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.83 66.0 6.39e-01 100.0% 82.5%
3472238 376.1.5.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › AN1-like Zinc finger › zf-AN1 0.83 72.0 6.71e-01 100.0% 82.5%
3482300 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.81 66.0 5.01e-01 100.0% 40.0%
3546235 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.81 69.0 6.28e-01 100.0% 71.1%
3561934 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.81 68.0 6.73e-01 100.0% 94.3%
4985634 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.81 69.0 5.60e-01 100.0% 88.9%
3259718 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.81 65.0 4.64e-01 100.0% 33.3%
5067072 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.81 68.0 5.99e-01 100.0% 66.0%
119462 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.81 68.0 4.45e-01 100.0% 41.5%
3891438 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.80 65.0 4.78e-01 100.0% 36.8%
3717337 376.1.1.165 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › FYVE 0.80 67.0 5.16e-01 100.0% 44.0%
8163 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.80 63.0 6.39e-01 96.9% 100.0%
5061512 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.79 68.0 6.41e-01 100.0% 80.0%
3519190 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.79 66.0 6.04e-01 100.0% 73.3%
3473774 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.79 57.0 5.87e-01 78.1% 100.0%
3399653 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.79 65.0 6.44e-01 100.0% 97.1%
3630382 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 61.0 6.18e-01 100.0% 100.0%
3368882 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.78 68.0 6.35e-01 100.0% 80.0%
4000128 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.78 63.0 4.79e-01 100.0% 41.2%
3392056 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.78 64.0 4.83e-01 100.0% 40.0%
3893981 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 59.0 5.98e-01 90.6% 96.7%
3742589 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 59.0 6.01e-01 90.6% 96.7%
3642067 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.77 62.0 5.41e-01 100.0% 61.8%
3313615 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.77 62.0 6.12e-01 100.0% 97.1%
3505175 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.77 56.0 5.77e-01 84.4% 100.0%
2393006 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.75 57.0 5.73e-01 90.6% 96.8%
3914982 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.75 59.0 5.05e-01 100.0% 88.3%
3827269 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.71 53.0 5.39e-01 93.8% 100.0%
3395505 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.71 54.0 5.16e-01 100.0% 75.6%
3491166 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.62 49.0 3.70e-01 100.0% 60.0%
3223097 375.14.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) 0.55 40.0 4.05e-01 90.6% 82.9%