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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00065
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00065
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-118
Domain cluster:
rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00487__D19-147
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.72 | 60.0 | 5.86e-01 | 90.8% | 86.0% |
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.69 | 53.0 | 5.35e-01 | 91.8% | 82.3% |
| 2b2hA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.63 | 44.0 | 2.93e-01 | 71.4% | 67.8% |
| 3kzhB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 37.0 | 2.67e-01 | 74.5% | 21.7% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 33.0 | 3.84e-01 | 88.8% | 87.9% |
| 6wb4B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 40.0 | 2.84e-01 | 76.5% | 64.3% |
| 2a2fX02 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.54 | 41.0 | 3.71e-01 | 94.9% | 60.5% |
| 2r7hB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 33.0 | 2.85e-01 | 94.9% | 39.0% |
| 2afbB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 38.0 | 2.69e-01 | 76.5% | 69.6% |
| 1f5qB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 37.0 | 3.65e-01 | 76.5% | 99.1% |
| 1vm7B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 38.0 | 2.72e-01 | 79.6% | 83.2% |
| 2p1gA01 | 1.10.3670.10 | Mainly Alpha › Orthogonal Bundle › Putative xylanase fold › Putative xylanase like domain | 0.51 | 35.0 | 3.29e-01 | 73.5% | 73.6% |
| 3lysA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.50 | 41.0 | 4.07e-01 | 98.0% | 81.9% |
| 2pq7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.50 | 37.0 | 3.13e-01 | 78.6% | 45.1% |
| 3qybA02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.50 | 38.0 | 3.97e-01 | 86.7% | 86.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3586672 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.77 | 67.0 | 6.59e-01 | 94.9% | 87.6% |
| 5039151 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.75 | 61.0 | 6.15e-01 | 87.8% | 100.0% |
| 4954554 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.71 | 60.0 | 5.89e-01 | 93.9% | 85.7% |
| 3944499 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.63 | 50.0 | 5.28e-01 | 92.9% | 98.8% |
| 4537543 | 3103.1.1.4 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_9 | 0.61 | 54.0 | 4.99e-01 | 98.0% | 97.6% |
| 5032019 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.55 | 34.0 | 3.57e-01 | 84.7% | 67.8% |
| 2723920 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.54 | 40.0 | 2.83e-01 | 76.5% | 64.1% |
| 4627737 | 108.2.1.2 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › OBP47_like | 0.54 | 42.0 | 3.57e-01 | 85.7% | 70.9% |
| 3213337 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.51 | 40.0 | 4.33e-01 | 99.0% | 96.5% |
| 4959794 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.51 | 36.0 | 3.01e-01 | 75.5% | 71.4% |
| None | — | 0.50 | 38.0 | 2.70e-01 | 79.6% | 82.6% | |
| 4947312 | 2484.1.1.16 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_HII | 0.50 | 44.0 | 3.49e-01 | 99.0% | 68.1% |