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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00068
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00068
Identity
- Kingdom:
- phage
Quality
41.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 450-540
D2
medium
residues 78-98_123-185_292-368
D3
medium
residues 666-740
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.90 | 54.0 | 6.87e-01 | 76.0% | 100.0% |
| 4b8vA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.87 | 61.0 | 6.42e-01 | 86.7% | 80.6% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.82 | 52.0 | 6.22e-01 | 80.0% | 100.0% |
| 1e0gA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.80 | 50.0 | 6.03e-01 | 81.3% | 100.0% |
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.75 | 56.0 | 5.58e-01 | 100.0% | 76.6% |
| 2mtzA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.75 | 49.0 | 5.75e-01 | 89.3% | 100.0% |
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.63 | 43.0 | 3.32e-01 | 70.7% | 65.7% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 46.0 | 4.40e-01 | 82.7% | 65.9% |
| 3sluB01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 45.0 | 4.23e-01 | 98.7% | 68.1% |
| 1rm6A05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.58 | 46.0 | 3.60e-01 | 89.3% | 82.7% |
| 7tvyA01 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.54 | 38.0 | 3.38e-01 | 76.0% | 69.0% |
| 3sszA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 36.0 | 3.09e-01 | 70.7% | 79.7% |
| 4k22B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 38.0 | 2.73e-01 | 78.7% | 31.8% |
| 2d2eA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.12e-01 | 96.0% | 65.7% |
| 6pz0A01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.52 | 36.0 | 2.91e-01 | 74.7% | 79.0% |
| 4iiwA01 | 3.30.1490.480 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Endolytic murein transglycosylase | 0.51 | 36.0 | 3.63e-01 | 86.7% | 73.7% |
| 2d9bA00 | 3.90.1460.10 | Alpha Beta › Alpha-Beta Complex › GTF2I-like repeat › GTF2I-like | 0.51 | 34.0 | 3.14e-01 | 72.0% | 67.0% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3955076 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 54.0 | 6.96e-01 | 70.7% | 100.0% |
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.90 | 64.0 | 7.42e-01 | 85.3% | 100.0% |
| 3979943 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.88 | 57.0 | 6.91e-01 | 76.0% | 100.0% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 62.0 | 7.19e-01 | 86.7% | 100.0% |
| 3349612 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.88 | 57.0 | 6.89e-01 | 84.0% | 100.0% |
| 3452845 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 59.0 | 6.81e-01 | 88.0% | 96.4% |
| 3517460 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 59.0 | 6.85e-01 | 89.3% | 98.2% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.85 | 60.0 | 6.84e-01 | 88.0% | 100.0% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 60.0 | 6.88e-01 | 86.7% | 100.0% |
| 3458171 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 61.0 | 6.58e-01 | 90.7% | 86.2% |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.84 | 61.0 | 6.10e-01 | 85.3% | 74.0% |
| 3898121 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 54.0 | 6.25e-01 | 86.7% | 90.9% |
| 3337080 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.83 | 60.0 | 6.64e-01 | 93.3% | 93.3% |
| 3303205 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 62.0 | 6.83e-01 | 89.3% | 96.7% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 64.0 | 6.94e-01 | 82.7% | 96.8% |
| 2047861 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 61.0 | 6.93e-01 | 89.3% | 100.0% |
| 4492966 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 57.0 | 6.53e-01 | 89.3% | 98.2% |
| 3846469 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 57.0 | 5.36e-01 | 86.7% | 60.0% |
| 3903953 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 52.0 | 6.24e-01 | 86.7% | 98.0% |
| 3413357 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 57.0 | 5.91e-01 | 93.3% | 78.6% |
| 3964920 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 55.0 | 6.13e-01 | 89.3% | 91.4% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.80 | 63.0 | 6.57e-01 | 90.7% | 88.6% |
| 3662672 | 101.15.1.8 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_NFP | 0.80 | 65.0 | 6.79e-01 | 94.7% | 91.4% |
| 3426433 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 60.0 | 6.68e-01 | 93.3% | 100.0% |
| 3969916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 60.0 | 6.24e-01 | 92.0% | 85.7% |
| 3810505 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 62.0 | 4.64e-01 | 93.3% | 37.6% |
| 3641672 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.77 | 59.0 | 5.97e-01 | 93.3% | 80.0% |
| 4613383 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 57.0 | 5.33e-01 | 78.7% | 67.8% |
| 162111 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 56.0 | 5.58e-01 | 100.0% | 76.6% |
| 4180515 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.74 | 51.0 | 5.83e-01 | 84.0% | 100.0% |
| 3973526 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.74 | 61.0 | 5.58e-01 | 88.0% | 69.5% |
| 3320955 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.73 | 58.0 | 6.15e-01 | 94.7% | 96.9% |
| 3375189 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.72 | 61.0 | 6.32e-01 | 90.7% | 97.1% |
| 3963519 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.71 | 51.0 | 5.47e-01 | 81.3% | 87.7% |
| 4555777 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.70 | 56.0 | 5.85e-01 | 94.7% | 91.4% |
| 3305689 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.70 | 62.0 | 5.01e-01 | 97.3% | 89.3% |
| 2124917 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.69 | 62.0 | 4.68e-01 | 94.7% | 98.1% |
| 3365578 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.69 | 59.0 | 5.78e-01 | 96.0% | 85.0% |
| 3367888 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.69 | 57.0 | 5.87e-01 | 94.7% | 94.3% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.69 | 50.0 | 5.42e-01 | 82.7% | 95.0% |
| 3421939 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.69 | 62.0 | 5.13e-01 | 97.3% | 94.4% |
| 3655335 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.69 | 61.0 | 4.59e-01 | 94.7% | 58.8% |
| 3164516 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.66 | 48.0 | 4.59e-01 | 88.0% | 65.9% |
| 2429117 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.65 | 45.0 | 3.49e-01 | 70.7% | 60.9% |
| 1832368 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.65 | 56.0 | 4.14e-01 | 96.0% | 74.6% |
| 3968457 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.64 | 47.0 | 4.53e-01 | 84.0% | 68.2% |
| 3982705 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.63 | 49.0 | 4.60e-01 | 93.3% | 67.0% |
| 1649977 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.63 | 46.0 | 4.36e-01 | 82.7% | 64.4% |
| 2429119 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.62 | 43.0 | 3.30e-01 | 70.7% | 66.9% |
| 2429116 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.62 | 42.0 | 3.35e-01 | 70.7% | 61.5% |
| 3815944 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.60 | 47.0 | 3.47e-01 | 84.0% | 70.0% |
| 1512999 | 3953.1.1.0 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain | 0.55 | 42.0 | 3.90e-01 | 96.0% | 64.4% |
| 5003519 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.53 | 36.0 | 3.50e-01 | 70.7% | 62.4% |
D4
medium
residues 816-925
D5
medium
residues 1172-1228