←Back to structures
Filtrate_w_scaffold_1_prodigal-single.1__X__X__00096
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00096
Identity
- Kingdom:
- phage
Quality
73.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 156-237
Domain cluster:
rep: OR515479.1__WNL63354.1__X__00095__D7-80
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.69 | 56.0 | 4.61e-01 | 89.0% | 76.3% |
| 4ftxB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.69 | 59.0 | 5.14e-01 | 95.1% | 85.2% |
| 3rjuA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.67 | 55.0 | 3.62e-01 | 90.2% | 83.2% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.67 | 45.0 | 3.51e-01 | 70.7% | 40.1% |
| 2gfiA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.66 | 48.0 | 3.38e-01 | 75.6% | 82.3% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.66 | 54.0 | 4.32e-01 | 90.2% | 55.8% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.66 | 51.0 | 4.33e-01 | 84.1% | 55.1% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.64 | 58.0 | 3.76e-01 | 100.0% | 28.2% |
| 2vt8A00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.64 | 48.0 | 3.95e-01 | 78.0% | 55.9% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.64 | 50.0 | 4.88e-01 | 90.2% | 93.7% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.63 | 54.0 | 3.95e-01 | 98.8% | 74.2% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.63 | 51.0 | 4.22e-01 | 89.0% | 66.0% |
| 3tqmA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.63 | 49.0 | 4.82e-01 | 87.8% | 95.6% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 42.0 | 4.78e-01 | 73.2% | 91.9% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.63 | 42.0 | 3.70e-01 | 70.7% | 47.1% |
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.62 | 46.0 | 3.60e-01 | 78.0% | 54.0% |
| 1ei5A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.62 | 48.0 | 3.26e-01 | 85.4% | 84.4% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.61 | 41.0 | 3.60e-01 | 76.8% | 46.7% |
| 1fx5B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 44.0 | 3.14e-01 | 75.6% | 66.1% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.61 | 46.0 | 4.06e-01 | 81.7% | 75.8% |
| 5jowA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 47.0 | 3.57e-01 | 84.1% | 43.5% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.60 | 50.0 | 4.22e-01 | 91.5% | 75.7% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.60 | 42.0 | 3.94e-01 | 74.4% | 87.7% |
| 4o9dA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 54.0 | 3.41e-01 | 100.0% | 20.7% |
| 4wj7D00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 46.0 | 4.00e-01 | 82.9% | 91.9% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.59 | 51.0 | 4.17e-01 | 93.9% | 78.1% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.58 | 49.0 | 3.18e-01 | 93.9% | 28.7% |
| 1pzdA01 | 2.60.40.1480 | Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain | 0.58 | 52.0 | 4.21e-01 | 100.0% | 88.5% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 40.0 | 3.54e-01 | 73.2% | 95.3% |
| 2aehA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 46.0 | 4.20e-01 | 87.8% | 82.0% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.57 | 49.0 | 3.16e-01 | 100.0% | 20.7% |
| 2jkbA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 49.0 | 3.21e-01 | 96.3% | 35.8% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 41.0 | 4.28e-01 | 76.8% | 94.4% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 41.0 | 3.23e-01 | 76.8% | 80.5% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 46.0 | 4.61e-01 | 91.5% | 97.6% |
| 1x7dB01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.55 | 46.0 | 3.71e-01 | 93.9% | 57.4% |
| 2wjsA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 43.0 | 3.34e-01 | 84.1% | 48.1% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.55 | 45.0 | 4.16e-01 | 87.8% | 92.3% |
| 5z5dA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 42.0 | 3.26e-01 | 84.1% | 43.7% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.54 | 44.0 | 3.71e-01 | 91.5% | 92.6% |
| 1k90A02 | 3.90.1760.10 | Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain | 0.54 | 30.0 | 2.43e-01 | 90.2% | 27.0% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.54 | 44.0 | 3.64e-01 | 91.5% | 54.2% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 47.0 | 3.37e-01 | 100.0% | 39.7% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.54 | 45.0 | 4.23e-01 | 92.7% | 85.3% |
| 1qhdA01 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 3.38e-01 | 87.8% | 95.9% |
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 38.0 | 3.06e-01 | 76.8% | 43.8% |
| 1yrzA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.35e-01 | 93.9% | 42.4% |
| 1dhkB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 3.27e-01 | 90.2% | 42.6% |
| 5mc9A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.41e-01 | 92.7% | 44.0% |
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 39.0 | 4.17e-01 | 84.1% | 95.7% |
| 5ee2A00 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 36.0 | 3.23e-01 | 73.2% | 56.6% |
| 3voqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.67e-01 | 87.8% | 80.2% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954483 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.75 | 61.0 | 5.31e-01 | 89.0% | 60.8% |
| 3312366 | 11.1.1.635 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_N_CWD1 | 0.72 | 61.0 | 4.97e-01 | 90.2% | 81.4% |
| 4012990 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.70 | 52.0 | 4.02e-01 | 78.0% | 58.1% |
| 4346133 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.70 | 51.0 | 4.18e-01 | 75.6% | 94.4% |
| 3204975 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.70 | 54.0 | 4.25e-01 | 81.7% | 60.0% |
| 4940485 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.70 | 54.0 | 4.62e-01 | 81.7% | 78.4% |
| 4471281 | 10.1.1.89 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26321 | 0.69 | 54.0 | 3.80e-01 | 81.7% | 36.6% |
| 3421076 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.69 | 51.0 | 3.44e-01 | 78.0% | 30.2% |
| 4986209 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 51.0 | 4.46e-01 | 78.0% | 79.0% |
| 3280283 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.69 | 56.0 | 3.65e-01 | 89.0% | 78.9% |
| 4145192 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.68 | 47.0 | 4.22e-01 | 70.7% | 57.3% |
| 3660454 | 5.1.5.96 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 | 0.67 | 52.0 | 3.51e-01 | 81.7% | 31.5% |
| 2557239 | 223.2.1.17 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SLM4 | 0.67 | 57.0 | 4.73e-01 | 95.1% | 67.1% |
| 3737835 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.66 | 46.0 | 4.31e-01 | 90.2% | 59.0% |
| 3813951 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.66 | 52.0 | 4.28e-01 | 86.6% | 58.1% |
| 3968112 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.66 | 55.0 | 4.43e-01 | 90.2% | 69.5% |
| 5027001 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.66 | 46.0 | 3.64e-01 | 73.2% | 40.0% |
| 3480143 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.66 | 48.0 | 3.90e-01 | 76.8% | 63.3% |
| 3336515 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.65 | 50.0 | 3.36e-01 | 81.7% | 29.8% |
| 3278456 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.65 | 52.0 | 3.43e-01 | 87.8% | 83.4% |
| 4027822 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.65 | 51.0 | 3.70e-01 | 82.9% | 72.9% |
| 3183106 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.65 | 52.0 | 3.41e-01 | 89.0% | 84.9% |
| 3520951 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 50.0 | 4.92e-01 | 85.4% | 92.2% |
| 4013196 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.64 | 55.0 | 3.51e-01 | 97.6% | 98.6% |
| 3821429 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.63 | 52.0 | 4.23e-01 | 90.2% | 69.4% |
| 4965666 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.63 | 47.0 | 3.64e-01 | 78.0% | 58.3% |
| 3332798 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.63 | 52.0 | 4.08e-01 | 90.2% | 65.1% |
| 3743289 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.63 | 47.0 | 4.39e-01 | 82.9% | 62.9% |
| 3425789 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.63 | 56.0 | 3.76e-01 | 100.0% | 35.0% |
| 4031638 | 7089.1.1.1 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF1108 | 0.62 | 49.0 | 4.86e-01 | 87.8% | 83.5% |
| 3315619 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 47.0 | 3.18e-01 | 81.7% | 30.5% |
| 3959341 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.62 | 49.0 | 4.21e-01 | 89.0% | 100.0% |
| 5016100 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.61 | 48.0 | 3.66e-01 | 82.9% | 41.6% |
| 3364063 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.61 | 52.0 | 4.31e-01 | 91.5% | 67.9% |
| 5044050 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.61 | 45.0 | 3.62e-01 | 78.0% | 59.4% |
| 3894031 | 330.1.1.6 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C | 0.61 | 44.0 | 4.36e-01 | 76.8% | 77.6% |
| 3765027 | 5.1.4.85 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N | 0.60 | 55.0 | 3.51e-01 | 98.8% | 30.0% |
| 3457141 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.60 | 44.0 | 2.99e-01 | 78.0% | 30.9% |
| 3937294 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.60 | 47.0 | 3.63e-01 | 82.9% | 54.4% |
| 3415592 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.60 | 51.0 | 4.12e-01 | 90.2% | 54.7% |
| 5036897 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.60 | 52.0 | 4.30e-01 | 95.1% | 55.9% |
| 4969674 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 52.0 | 3.41e-01 | 96.3% | 25.6% |
| 4945471 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 40.0 | 4.42e-01 | 70.7% | 90.8% |
| 3510695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 44.0 | 4.51e-01 | 79.3% | 81.2% |
| 3675472 | 5.1.5.45 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN | 0.60 | 44.0 | 3.22e-01 | 79.3% | 33.6% |
| 3592054 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.59 | 47.0 | 3.38e-01 | 85.4% | 84.5% |
| 3483808 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.59 | 44.0 | 4.68e-01 | 78.0% | 94.3% |
| 3461718 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 47.0 | 3.42e-01 | 91.5% | 30.9% |
| 5011042 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.59 | 47.0 | 4.04e-01 | 93.9% | 54.6% |
| 3990496 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.59 | 42.0 | 4.48e-01 | 92.7% | 85.7% |
| 3699374 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 51.0 | 4.28e-01 | 93.9% | 81.5% |
| 3483806 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.59 | 49.0 | 3.97e-01 | 89.0% | 80.0% |
| 3394516 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.58 | 49.0 | 4.06e-01 | 90.2% | 55.6% |
| 5022763 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 52.0 | 3.48e-01 | 100.0% | 31.1% |
| 3241305 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.58 | 49.0 | 4.06e-01 | 90.2% | 75.0% |
| 3215406 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.58 | 50.0 | 3.16e-01 | 98.8% | 48.6% |
| 3678427 | 5.1.4.379 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_2 | 0.58 | 51.0 | 3.45e-01 | 98.8% | 27.2% |
| 3714612 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.57 | 48.0 | 3.94e-01 | 96.3% | 47.9% |
| 4029923 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.57 | 41.0 | 3.00e-01 | 75.6% | 60.0% |
| 3550970 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.57 | 47.0 | 4.27e-01 | 90.2% | 80.0% |
| 3929256 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.57 | 47.0 | 3.98e-01 | 91.5% | 70.7% |
| 2491351 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.57 | 48.0 | 3.45e-01 | 93.9% | 39.8% |
| 4544568 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.57 | 47.0 | 4.25e-01 | 90.2% | 79.1% |
| 3929846 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 49.0 | 3.31e-01 | 96.3% | 28.9% |
| 3739945 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.56 | 50.0 | 3.26e-01 | 100.0% | 37.1% |
| 3281522 | 10.1.1.16 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Peptidase_A4 | 0.56 | 43.0 | 3.31e-01 | 86.6% | 49.3% |
| 5033269 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.55 | 47.0 | 3.12e-01 | 95.1% | 84.7% |
| 3630390 | 5.1.4.271 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 | 0.55 | 49.0 | 3.20e-01 | 100.0% | 23.3% |
| 3583675 | 5.1.4.321 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 | 0.55 | 49.0 | 3.22e-01 | 98.8% | 25.3% |
| 3844416 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.55 | 49.0 | 3.16e-01 | 100.0% | 36.4% |
| 3388787 | 719.1.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 | 0.54 | 45.0 | 3.97e-01 | 92.7% | 80.0% |
| 3438374 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 47.0 | 3.15e-01 | 100.0% | 32.2% |
| 5009289 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.54 | 45.0 | 3.96e-01 | 93.9% | 62.5% |
| 4985112 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.54 | 44.0 | 3.48e-01 | 92.7% | 90.6% |
| 4996503 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.54 | 44.0 | 3.49e-01 | 95.1% | 88.4% |
| 4029125 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.52 | 45.0 | 3.01e-01 | 97.6% | 26.2% |
| 3306468 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.52 | 43.0 | 3.44e-01 | 95.1% | 88.9% |
D2
medium
residues 88-151_238-259
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k04A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.69 | 49.0 | 4.62e-01 | 74.4% | 98.1% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.67 | 46.0 | 3.96e-01 | 70.9% | 65.4% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 44.0 | 4.32e-01 | 74.4% | 78.0% |
| 3we9A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.61 | 48.0 | 3.47e-01 | 84.9% | 93.5% |
| 3mvuA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.61 | 50.0 | 3.73e-01 | 90.7% | 75.0% |
| 1e3pA02 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.60 | 41.0 | 4.17e-01 | 77.9% | 72.3% |
| 3rh3A01 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.59 | 42.0 | 3.61e-01 | 74.4% | 61.7% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 47.0 | 4.23e-01 | 89.5% | 81.7% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 40.0 | 3.06e-01 | 74.4% | 81.9% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.57 | 40.0 | 3.79e-01 | 74.4% | 72.0% |
| 1xvhB00 | 1.20.120.1850 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Ebh helix bundles repeating unit (S and A modules) | 0.57 | 44.0 | 4.03e-01 | 84.9% | 84.7% |
| 1qkrB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 45.0 | 3.53e-01 | 86.0% | 75.0% |
| 2vm6A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.56 | 42.0 | 3.64e-01 | 82.6% | 86.8% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 40.0 | 4.24e-01 | 79.1% | 84.6% |
| 7t7kA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.54 | 42.0 | 3.81e-01 | 84.9% | 99.2% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 40.0 | 3.35e-01 | 80.2% | 74.4% |
| 4gmqA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.53 | 40.0 | 3.92e-01 | 79.1% | 85.9% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 42.0 | 2.99e-01 | 90.7% | 82.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4465966 | 632.11.1.10 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › EzrA | 0.72 | 51.0 | 4.43e-01 | 74.4% | 87.7% |
| 4165790 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.68 | 55.0 | 3.95e-01 | 87.2% | 93.5% |
| 3331738 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.66 | 45.0 | 4.24e-01 | 70.9% | 88.6% |
| 4993688 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.63 | 47.0 | 4.55e-01 | 79.1% | 85.3% |
| 4349227 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.62 | 44.0 | 3.16e-01 | 74.4% | 70.2% |
| 3230714 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.62 | 45.0 | 4.43e-01 | 75.6% | 98.9% |
| 3617282 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.61 | 51.0 | 4.43e-01 | 94.2% | 89.3% |
| 1308502 | 5050.1.1.2 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 | 0.60 | 46.0 | 3.45e-01 | 83.7% | 60.4% |
| 4169890 | 5.1.11.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta_propel | 0.59 | 52.0 | 3.22e-01 | 100.0% | 52.0% |
| 4316391 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 48.0 | 3.28e-01 | 98.8% | 23.7% |
| 4992111 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.58 | 40.0 | 3.48e-01 | 72.1% | 91.1% |
| 3537942 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.57 | 41.0 | 3.14e-01 | 74.4% | 89.0% |
| 4026038 | 193.1.1.58 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › PF26801 | 0.57 | 44.0 | 3.60e-01 | 82.6% | 61.3% |
| 3517600 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.57 | 40.0 | 4.26e-01 | 74.4% | 93.3% |
| 5007978 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.55 | 38.0 | 3.27e-01 | 70.9% | 99.3% |
| 3739108 | 509.1.1.17 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PF28859 | 0.54 | 40.0 | 4.22e-01 | 81.4% | 90.7% |
| 5082774 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.53 | 38.0 | 3.16e-01 | 74.4% | 48.0% |
| 5047089 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.52 | 36.0 | 3.40e-01 | 73.3% | 84.5% |