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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00140

Bact-Vir

Filtrate_w_scaffold_1_prodigal-single.1__X__X__00140

Identity

Kingdom:
phage

Quality

59.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 52-66_119-165
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.72 47.0 4.17e-01 96.8% 46.2%
2vtcA00 2.70.50.70 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › 0.69 63.0 4.21e-01 100.0% 42.5%
4b5qA00 2.70.50.70 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › 0.69 63.0 4.24e-01 100.0% 43.8%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.69 52.0 4.19e-01 98.4% 42.5%
6vfqA02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.68 48.0 3.97e-01 75.8% 92.1%
2ebmA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.67 46.0 3.68e-01 91.9% 35.2%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.67 49.0 3.82e-01 100.0% 36.3%
3o4oC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 45.0 3.81e-01 75.8% 87.9%
3t1oA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 43.0 3.04e-01 95.2% 22.9%
4jhmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.63 50.0 4.01e-01 98.4% 45.3%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.62 41.0 3.39e-01 90.3% 37.2%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.62 42.0 3.55e-01 93.5% 40.4%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 39.0 3.15e-01 90.3% 33.1%
1tp6A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 47.0 3.72e-01 98.4% 42.9%
3ik4B01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 45.0 3.67e-01 100.0% 44.9%
4ph8A00 2.60.40.2910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 47.0 3.67e-01 96.8% 70.0%
3fcsA04 2.60.40.1530 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 0.57 47.0 3.48e-01 95.2% 74.6%
5d6hA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 49.0 3.90e-01 96.8% 65.1%
1b9lA00 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.56 45.0 3.73e-01 91.9% 75.6%
1dgjA07 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.55 38.0 2.83e-01 75.8% 33.7%
1p5vA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 49.0 4.17e-01 100.0% 73.8%
3b7kC02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 48.0 3.96e-01 96.8% 85.5%
1dhnA00 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.55 44.0 3.69e-01 95.2% 78.5%
3webA00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 47.0 3.70e-01 96.8% 62.9%
3kptA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 48.0 3.66e-01 98.4% 75.9%
3px5A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 44.0 3.62e-01 100.0% 48.3%
4liqE04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 47.0 4.05e-01 96.8% 67.3%
6udkD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 3.72e-01 100.0% 73.1%
4cbpA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 49.0 3.99e-01 100.0% 64.5%
3vi3A02 2.60.40.1460 Mainly Beta › Sandwich › Immunoglobulin-like › Integrin domains. Chain A, domain 2 0.53 45.0 3.45e-01 96.8% 67.1%
3ottB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 47.0 3.74e-01 98.4% 49.2%
2e9wA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 47.0 3.96e-01 98.4% 67.6%
1of5B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 43.0 3.37e-01 95.2% 43.0%
5jp0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.46e-01 91.9% 51.6%
6efyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 3.89e-01 96.8% 70.4%
4owzA00 3.10.130.10 Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain 0.52 45.0 3.51e-01 96.8% 72.4%
4ojdH01 2.60.98.60 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 0.52 43.0 3.27e-01 98.4% 69.5%
4f8bA00 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.51 43.0 3.35e-01 93.5% 55.4%
2jtyA00 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.51 42.0 3.16e-01 100.0% 62.5%
2bi0A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 43.0 3.35e-01 100.0% 77.6%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 37.0 3.13e-01 91.9% 45.5%
4wrnA02 2.60.40.3210 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-N domain 0.50 42.0 3.62e-01 98.4% 71.4%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3474865 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 49.0 3.85e-01 75.8% 77.0%
1566337 11.1.1.57 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › AA9 0.69 63.0 4.29e-01 100.0% 44.9%
4020599 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 62.0 4.01e-01 100.0% 41.5%
3969175 11.1.1.10 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_N 0.65 57.0 4.70e-01 100.0% 75.7%
3471067 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.65 51.0 3.28e-01 100.0% 17.5%
4004660 11.1.1.10 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_N 0.64 57.0 4.49e-01 100.0% 71.5%
3473792 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.64 45.0 3.71e-01 75.8% 90.8%
3927757 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.64 45.0 3.84e-01 75.8% 90.5%
4443636 11.1.1.1271 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29942 0.62 54.0 4.31e-01 98.4% 77.6%
5017212 11.1.1.1443 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29994 0.62 49.0 3.97e-01 98.4% 46.1%
5059298 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 53.0 4.25e-01 100.0% 65.4%
4000227 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 54.0 4.69e-01 100.0% 92.6%
3486746 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 53.0 4.06e-01 98.4% 57.9%
3591446 11.1.1.883 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_CFAP65_7th 0.61 53.0 4.24e-01 98.4% 64.0%
3191159 11.1.1.926 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7136 0.61 54.0 4.07e-01 100.0% 61.3%
3486307 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.60 52.0 3.34e-01 100.0% 28.3%
3640791 11.1.1.63 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP_alpha 0.60 53.0 3.99e-01 100.0% 54.2%
3507757 11.1.1.385 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASH 0.60 52.0 4.16e-01 98.4% 62.4%
4244411 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 49.0 3.92e-01 95.2% 76.3%
3603359 4.1.1.459 beta barrels › SH3 › SH3 › SH3 › PF29994 0.59 45.0 3.84e-01 100.0% 48.2%
3497479 11.1.1.35 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › WIF 0.59 51.0 3.97e-01 100.0% 55.2%
3783151 11.1.1.868 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26280 0.59 50.0 3.88e-01 98.4% 71.7%
3167800 230.1.1.4 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB 0.58 50.0 4.05e-01 96.8% 79.2%
3978743 11.1.1.10 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_N 0.58 48.0 3.96e-01 96.8% 74.4%
3522999 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.58 50.0 4.09e-01 100.0% 63.3%
3582722 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.58 48.0 2.90e-01 95.2% 14.2%
3508885 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 51.0 3.82e-01 98.4% 48.0%
3759414 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 51.0 4.28e-01 100.0% 69.5%
5078331 316.1.1.18 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.57 41.0 2.78e-01 96.8% 18.1%
3559414 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 49.0 3.64e-01 96.8% 69.7%
3935318 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.57 50.0 3.94e-01 100.0% 57.8%
3541922 11.1.1.477 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Frem_N 0.57 48.0 3.85e-01 100.0% 68.9%
3483692 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 3.91e-01 100.0% 61.7%
3733885 11.1.1.868 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26280 0.56 47.0 3.62e-01 96.8% 73.3%
5081494 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 3.89e-01 100.0% 68.8%
3544627 389.1.3.35 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TSP1_spondin 0.55 44.0 4.52e-01 96.8% 93.3%
3492040 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 3.96e-01 100.0% 65.1%
4011702 11.1.1.598 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › RSC4_Ig_like 0.55 46.0 3.50e-01 95.2% 50.0%
3718682 2004.1.1.26 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin 0.54 45.0 3.14e-01 100.0% 47.8%
5023738 11.1.1.1443 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29994 0.54 40.0 3.45e-01 100.0% 47.3%
3592060 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 3.70e-01 100.0% 72.3%
4970317 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 3.80e-01 100.0% 66.1%
3865665 11.1.1.585 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERG_C 0.53 44.0 3.17e-01 100.0% 58.1%
3547692 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 3.65e-01 100.0% 65.6%
5039394 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.57e-01 100.0% 68.5%
3703714 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.55e-01 98.4% 70.0%
3480731 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 3.56e-01 98.4% 68.3%
3779564 922.1.1.5 few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin 0.51 41.0 4.05e-01 98.4% 87.7%
3866034 5089.1.1.3 beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Gasdermin 0.50 41.0 2.78e-01 91.9% 38.7%
2989739 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.50 41.0 3.49e-01 100.0% 62.0%
D2 medium residues 84-118_166-177
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 48.0 4.43e-01 70.2% 52.4%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.67 46.0 3.59e-01 74.5% 72.1%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.67 58.0 3.47e-01 100.0% 54.7%
1uurA04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 48.0 3.55e-01 80.9% 60.2%
3sonA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.65 49.0 3.59e-01 87.2% 91.8%
3mlqH00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 44.0 4.58e-01 70.2% 78.6%
2jzlA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.64 48.0 3.79e-01 87.2% 71.2%
3gz8C01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.64 48.0 3.58e-01 87.2% 95.6%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.63 41.0 3.12e-01 72.3% 27.4%
3akhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 52.0 3.22e-01 100.0% 41.9%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 46.0 4.26e-01 78.7% 88.1%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 42.0 3.06e-01 72.3% 26.5%
2va0A00 3.30.450.160 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.61 41.0 3.30e-01 70.2% 33.3%
2cfuA01 3.60.15.30 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Metallo-beta-lactamase domain 0.61 41.0 2.45e-01 70.2% 9.2%
4c47A01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.60 45.0 3.42e-01 85.1% 80.3%
2ivwA01 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 3.52e-01 72.3% 97.5%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.59 43.0 3.67e-01 78.7% 77.1%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 41.0 3.31e-01 74.5% 54.1%
3s9dD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 3.70e-01 89.4% 100.0%
3v7dD02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 49.0 2.95e-01 100.0% 43.2%
4j7hA02 3.90.79.40 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › EvaA sugar 2,3-dehydratase subunit 0.58 49.0 3.41e-01 100.0% 57.6%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.57 47.0 2.94e-01 97.9% 35.4%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 48.0 3.82e-01 95.7% 68.4%
5jozA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 48.0 2.96e-01 100.0% 52.5%
1kvzA00 3.10.130.10 Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain 0.57 41.0 3.26e-01 80.9% 89.7%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.47e-01 89.4% 69.1%
3kh8A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 38.0 2.85e-01 70.2% 78.2%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 47.0 2.89e-01 100.0% 52.6%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.56 39.0 2.75e-01 74.5% 56.0%
7jvhC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 47.0 2.87e-01 100.0% 51.4%
2rk9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 38.0 2.93e-01 72.3% 31.6%
2db2A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 38.0 3.15e-01 74.5% 38.3%
2ychA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 45.0 3.30e-01 100.0% 91.6%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 36.0 3.42e-01 70.2% 56.9%
2qrdA00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.55 46.0 3.57e-01 100.0% 62.3%
3c7fA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 45.0 2.75e-01 100.0% 43.8%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 38.0 2.43e-01 72.3% 16.8%
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.55 44.0 3.50e-01 100.0% 82.5%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 45.0 3.84e-01 95.7% 67.9%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 38.0 3.03e-01 80.9% 72.9%
3t4nA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.54 44.0 3.62e-01 97.9% 64.6%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 3.49e-01 72.3% 73.3%
2nvwA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 37.0 2.47e-01 74.5% 75.7%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 40.0 3.28e-01 91.5% 69.7%
1t6cA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.53 43.0 3.04e-01 100.0% 90.6%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 38.0 3.15e-01 80.9% 63.2%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 40.0 3.10e-01 89.4% 90.2%
1nbwA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 41.0 3.17e-01 97.9% 93.9%
1o5yA00 3.10.690.10 Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain 0.52 39.0 3.01e-01 93.6% 85.3%
1mtpA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 37.0 3.13e-01 80.9% 60.4%
6ksrA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 40.0 3.00e-01 95.7% 91.9%
3hi0A02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.52 42.0 2.95e-01 100.0% 85.8%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 43.0 3.28e-01 97.9% 45.8%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 42.0 3.14e-01 100.0% 75.9%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 37.0 3.19e-01 87.2% 66.7%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 40.0 2.74e-01 97.9% 33.0%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3261242 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 55.0 3.60e-01 74.5% 60.0%
3969970 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.74 49.0 4.23e-01 70.2% 44.0%
3967221 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.71 52.0 3.16e-01 78.7% 72.5%
3824290 1.1.1.28 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N 0.70 54.0 3.22e-01 85.1% 37.5%
5076410 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.69 50.0 2.96e-01 78.7% 89.7%
4989633 3891.1.1.0 a+b two layers › Archaea-specific ribosomal protein L46a › Archaea-specific ribosomal protein L46a › Archaea-specific ribosomal protein L46a 0.68 56.0 4.78e-01 95.7% 80.0%
3636285 220.1.1.201 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7493 0.67 47.0 4.22e-01 72.3% 52.3%
3839369 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.67 45.0 3.75e-01 70.2% 58.7%
3224914 220.1.1.52 beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.67 48.0 3.67e-01 78.7% 38.3%
4025764 361.1.1.0 few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.66 46.0 4.25e-01 87.2% 58.3%
4982659 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.66 46.0 2.81e-01 78.7% 93.7%
144305 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.65 49.0 3.60e-01 87.2% 95.2%
5044978 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.64 43.0 3.74e-01 70.2% 44.0%
5048561 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 43.0 3.29e-01 74.5% 30.0%
4299507 3256.1.1.2 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain › eIF3g 0.62 41.0 4.36e-01 70.2% 97.1%
4951189 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.61 44.0 4.39e-01 78.7% 90.0%
3626321 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.61 40.0 3.94e-01 70.2% 60.0%
3214386 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.61 41.0 4.06e-01 70.2% 66.0%
4928701 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 41.0 3.22e-01 74.5% 31.4%
3528883 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.60 47.0 2.76e-01 89.4% 10.1%
3589882 4325.1.1.7 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 0.60 43.0 4.24e-01 78.7% 78.0%
3535499 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 45.0 3.52e-01 85.1% 46.4%
5011673 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 44.0 3.49e-01 87.2% 67.0%
164975 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.59 43.0 3.69e-01 78.7% 78.0%
3307236 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 42.0 3.23e-01 78.7% 90.0%
3937472 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.59 45.0 3.53e-01 85.1% 71.4%
4028149 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.58 39.0 3.21e-01 70.2% 50.5%
5027780 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.58 42.0 3.91e-01 78.7% 76.7%
3413411 109.21.1.3 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Sec16_C 0.58 40.0 2.33e-01 74.5% 7.3%
5075211 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.58 45.0 4.45e-01 85.1% 90.0%
5081878 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 47.0 2.82e-01 95.7% 60.3%
3505476 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.57 48.0 3.06e-01 100.0% 40.0%
3513056 221.4.1.18 a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N 0.56 39.0 2.48e-01 74.5% 50.0%
3745492 2484.1.1.176 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 0.56 45.0 2.50e-01 97.9% 25.2%
3391728 3459.1.1.1 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.56 38.0 3.30e-01 74.5% 42.9%
3992631 221.4.1.23 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, PF25969 0.56 46.0 2.97e-01 100.0% 40.2%
3548557 11.1.1.21 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Tissue_fac 0.56 46.0 3.63e-01 97.9% 90.9%
3518237 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.56 47.0 3.10e-01 100.0% 55.2%
4675181 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 39.0 3.22e-01 76.6% 43.2%
3604640 3740.1.1.1 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C 0.55 45.0 2.88e-01 95.7% 61.6%
3960667 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 37.0 2.73e-01 70.2% 26.7%
3695678 3924.1.1.0 alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.55 42.0 2.49e-01 89.4% 50.5%
1144832 2484.1.1.63 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3822 0.55 44.0 3.63e-01 100.0% 94.0%
4464751 4041.1.1.0 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.54 45.0 3.05e-01 91.5% 74.7%
3625529 221.4.1.23 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, PF25969 0.54 44.0 2.83e-01 100.0% 40.0%
3321360 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.54 39.0 3.42e-01 80.9% 76.0%
3323289 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 39.0 3.60e-01 85.1% 84.3%
4944053 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 40.0 3.50e-01 85.1% 56.0%
4971131 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 39.0 2.26e-01 83.0% 25.3%
4295277 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 35.0 2.58e-01 70.2% 22.7%
3877730 2484.1.1.5 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1 0.53 40.0 2.75e-01 95.7% 63.0%
4025219 874.1.1.0 a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain 0.53 36.0 2.47e-01 74.5% 52.7%
3626212 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 41.0 2.96e-01 91.5% 42.6%
5055486 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 39.0 3.39e-01 85.1% 67.1%
3238676 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 40.0 3.00e-01 95.7% 60.4%
3844241 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 35.0 3.03e-01 70.2% 48.0%
3987365 896.1.1.4 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 0.52 39.0 3.42e-01 87.2% 77.5%
3230925 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.52 39.0 2.94e-01 85.1% 74.6%
3513195 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 34.0 2.85e-01 70.2% 56.0%
4969052 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 41.0 2.58e-01 97.9% 45.0%
2418839 12.6.1.4 beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M 0.51 35.0 2.71e-01 70.2% 28.6%
3509551 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 38.0 3.26e-01 85.1% 69.4%
5028142 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 2.71e-01 100.0% 27.4%
4553891 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.51 41.0 3.13e-01 95.7% 88.0%
4392478 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 41.0 3.35e-01 97.9% 88.0%
4961179 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.50 35.0 3.48e-01 78.7% 88.0%