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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00146
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00146
Identity
- Kingdom:
- phage
Quality
60.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 84-191
Domain cluster:
rep: IMGVR_UViG_3300025584_000284-3300025584-Ga0209774_100031726__D151-252
D2
high
residues 524-579
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5vmzA03 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.66 | 43.0 | 4.87e-01 | 85.7% | 95.0% |
| 3rkgA01 | 2.40.128.330 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 46.0 | 3.98e-01 | 85.7% | 83.0% |
| 2a90A02 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.53 | 39.0 | 3.90e-01 | 83.9% | 100.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3597842 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.54 | 38.0 | 3.82e-01 | 80.4% | 98.3% |
| 274267 | 10.2.1.87 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › P3_C | 0.52 | 45.0 | 3.33e-01 | 98.2% | 58.9% |
D3
medium
residues 1-14_217-282
D4
medium
residues 15-83
D5
medium
residues 351-436
D6
medium
residues 455-518
Domain cluster:
rep: IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_10000072181__D164-213
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 62.0 | 6.14e-01 | 87.5% | 83.8% |
| 2x5pA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 45.0 | 3.81e-01 | 100.0% | 42.3% |
| 7sqxA02 | 3.30.70.2150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 52.0 | 4.56e-01 | 87.5% | 84.7% |
| 3of1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 43.0 | 3.40e-01 | 85.9% | 33.1% |
| 3irzA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 43.0 | 3.69e-01 | 87.5% | 44.4% |
| 1v6eA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 39.0 | 3.65e-01 | 84.4% | 50.0% |
| 1cidA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 39.0 | 3.82e-01 | 85.9% | 56.3% |
| 2mm0A00 | 2.10.70.110 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.62 | 49.0 | 4.95e-01 | 85.9% | 100.0% |
| 3kptB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 43.0 | 3.66e-01 | 100.0% | 44.4% |
| 3jxvA01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.61 | 47.0 | 3.92e-01 | 85.9% | 70.7% |
| 2mtzA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.61 | 36.0 | 4.00e-01 | 75.0% | 76.0% |
| 4jgpA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 39.0 | 3.45e-01 | 82.8% | 47.8% |
| 2hf6A00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 44.0 | 3.46e-01 | 84.4% | 67.8% |
| 3f1sB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 40.0 | 3.52e-01 | 85.9% | 49.5% |
| 1vpwA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 39.0 | 4.08e-01 | 70.3% | 91.2% |
| 3afgA03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 41.0 | 3.50e-01 | 100.0% | 48.0% |
| 3nqhA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 49.0 | 3.86e-01 | 100.0% | 51.5% |
| 1e0gA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.55 | 33.0 | 3.59e-01 | 76.6% | 75.0% |
| 5icuA00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 43.0 | 3.68e-01 | 100.0% | 52.9% |
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 43.0 | 2.93e-01 | 85.9% | 41.5% |
| 2pn5A02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.54 | 40.0 | 3.48e-01 | 87.5% | 50.5% |
| 4es8B02 | 2.60.40.3580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 44.0 | 3.73e-01 | 89.1% | 54.5% |
| 2a74A02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.54 | 41.0 | 3.51e-01 | 87.5% | 51.5% |
| 1ut9A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 3.71e-01 | 85.9% | 56.1% |
| 3mjqA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 39.0 | 3.37e-01 | 79.7% | 84.1% |
| 3gtyX02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.53 | 47.0 | 4.34e-01 | 100.0% | 79.8% |
| 3fsyB01 | 3.30.70.2010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.59e-01 | 87.5% | 59.3% |
| 2r5oA01 | 2.70.50.60 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain | 0.52 | 44.0 | 3.32e-01 | 92.2% | 44.4% |
| 2v50D07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.52 | 41.0 | 3.66e-01 | 87.5% | 92.6% |
| 4cj0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.49e-01 | 84.4% | 54.7% |
| 3b33A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 41.0 | 3.44e-01 | 85.9% | 89.9% |
| 4zzfA02 | 2.60.40.4070 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 3.71e-01 | 89.1% | 63.5% |
| 3ewkA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 41.0 | 3.41e-01 | 84.4% | 99.1% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 40.0 | 3.32e-01 | 84.4% | 90.2% |
| 3volA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 40.0 | 3.14e-01 | 85.9% | 75.4% |
| 2d9oA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 40.0 | 3.46e-01 | 85.9% | 81.0% |
| 3bgaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.55e-01 | 92.2% | 56.8% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 40.0 | 3.15e-01 | 85.9% | 58.5% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.50 | 36.0 | 2.78e-01 | 85.9% | 31.2% |
| 3v3sA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 41.0 | 2.87e-01 | 100.0% | 65.4% |
| 3fn9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.36e-01 | 90.6% | 52.5% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3171408 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.91 | 67.0 | 7.53e-01 | 76.6% | 100.0% |
| 4414927 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.90 | 72.0 | 7.05e-01 | 84.4% | 87.0% |
| 4384880 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.85 | 66.0 | 5.99e-01 | 82.8% | 65.9% |
| 4946799 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.81 | 49.0 | 4.01e-01 | 82.8% | 35.5% |
| 2876 | 101.1.14.2 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › I-HmuI_NUMOD-like | 0.77 | 62.0 | 6.11e-01 | 87.5% | 82.6% |
| 4274058 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.69 | 43.0 | 3.72e-01 | 84.4% | 42.1% |
| 4476840 | 11.1.1.156 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG3 | 0.69 | 45.0 | 3.90e-01 | 85.9% | 45.3% |
| 3284181 | 11.1.1.691 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1416 | 0.68 | 44.0 | 3.91e-01 | 85.9% | 46.7% |
| 3634461 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.67 | 41.0 | 3.88e-01 | 84.4% | 52.7% |
| 3193829 | 101.1.2.306 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR2 | 0.62 | 51.0 | 4.38e-01 | 92.2% | 70.5% |
| 4368579 | 101.1.2.306 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR2 | 0.60 | 49.0 | 4.45e-01 | 92.2% | 82.2% |
| 3726714 | 101.1.6.21 ↗ | alpha arrays › HTH › HTH › TrpR › NPR2 | 0.60 | 49.0 | 4.52e-01 | 92.2% | 87.1% |
| 3750799 | 101.1.3.21 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › NPR2 | 0.60 | 49.0 | 4.44e-01 | 92.2% | 82.2% |
| 3805835 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.60 | 45.0 | 3.09e-01 | 85.9% | 27.9% |
| 5070545 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 43.0 | 3.48e-01 | 100.0% | 40.8% |
| 3740939 | 101.1.2.306 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR2 | 0.59 | 49.0 | 4.48e-01 | 92.2% | 87.1% |
| 140020 | 11.1.1.48 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CelD_N | 0.58 | 43.0 | 3.70e-01 | 85.9% | 51.0% |
| 3251513 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.58 | 48.0 | 3.22e-01 | 92.2% | 56.0% |
| 3607162 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 41.0 | 3.21e-01 | 78.1% | 86.9% |
| 3592956 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 51.0 | 4.85e-01 | 100.0% | 89.3% |
| 3482975 | 223.2.1.7 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N | 0.57 | 41.0 | 3.41e-01 | 79.7% | 79.2% |
| 4931451 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 41.0 | 3.55e-01 | 79.7% | 69.1% |
| 3258216 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.57 | 46.0 | 3.21e-01 | 92.2% | 55.6% |
| 3255497 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.57 | 47.0 | 3.34e-01 | 98.4% | 86.7% |
| 3273661 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.56 | 46.0 | 3.17e-01 | 92.2% | 53.6% |
| 3593295 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 40.0 | 3.49e-01 | 81.2% | 90.9% |
| 4203680 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 40.0 | 3.30e-01 | 81.2% | 66.2% |
| 3385583 | 288.1.1.1 ↗ | a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › Cu-oxidase_4 | 0.54 | 46.0 | 3.22e-01 | 96.9% | 54.5% |
| 4023252 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 42.0 | 3.42e-01 | 87.5% | 72.3% |
| 3180640 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.54 | 46.0 | 3.52e-01 | 98.4% | 83.1% |
| 3783719 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 38.0 | 3.16e-01 | 75.0% | 78.3% |
| 3926578 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.53 | 46.0 | 4.21e-01 | 98.4% | 100.0% |
| 4324607 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.53 | 38.0 | 3.01e-01 | 81.2% | 61.9% |
| 3832464 | 223.1.1.93 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF7950 | 0.53 | 42.0 | 3.24e-01 | 87.5% | 65.7% |
| 4677975 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.52 | 46.0 | 3.78e-01 | 100.0% | 55.1% |
| 3456659 | 223.1.1.93 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF7950 | 0.52 | 41.0 | 3.29e-01 | 87.5% | 76.2% |
| 3969877 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 41.0 | 3.57e-01 | 85.9% | 90.5% |
| 3259329 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.51 | 42.0 | 2.98e-01 | 98.4% | 94.3% |
| 5045469 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 42.0 | 3.42e-01 | 89.1% | 88.7% |
| 3248340 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.51 | 42.0 | 3.05e-01 | 100.0% | 88.9% |
| 5006876 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 36.0 | 3.07e-01 | 76.6% | 59.3% |
| 5051614 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 37.0 | 3.09e-01 | 81.2% | 83.2% |
| 3263284 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.50 | 42.0 | 2.97e-01 | 100.0% | 95.7% |